RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 KMT2DO14686 5537 aa5□□□□□ -1.61
SHANK2-AS3-201ENST00000307548 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
SHANK2-AS3-201ENST00000307548 MUC12Q9UKN1 5478 aa5□□□□□ -1.61
SHANK2-AS3-201ENST00000307548 LCE3AQ5TA76 89 aa4.98□□□□□ -1.61
SHANK2-AS3-201ENST00000307548 NEBP20929 6669 aa4.97□□□□□ -1.61
SHANK2-AS3-201ENST00000307548 KRTAP4-7Q9BYR0 210 aa4.97□□□□□ -1.61
SHANK2-AS3-201ENST00000307548 KRTAP6-3Q3LI67 103 aa4.96□□□□□ -1.61
SHANK2-AS3-201ENST00000307548 KRTAP8-1Q8IUC2 63 aa4.94□□□□□ -1.62
SHANK2-AS3-201ENST00000307548 KRTAP4-11Q9BYQ6 195 aa4.91□□□□□ -1.62
SHANK2-AS3-201ENST00000307548 MDN1Q9NU22 5596 aa4.86□□□□□ -1.63
SHANK2-AS3-201ENST00000307548 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
SHANK2-AS3-201ENST00000307548 KRTAP5-9P26371 169 aa4.78□□□□□ -1.64
SHANK2-AS3-201ENST00000307548 KRTAP19-5Q3LI72 72 aa4.77□□□□□ -1.65
SHANK2-AS3-201ENST00000307548 KRTAP19-7Q3SYF9 63 aa4.75□□□□□ -1.65
SHANK2-AS3-201ENST00000307548 KRTAP4-2Q9BYR5 136 aa4.74□□□□□ -1.65
SHANK2-AS3-201ENST00000307548 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
SHANK2-AS3-201ENST00000307548 SPRR2FQ96RM1 72 aa4.7□□□□□ -1.66
SHANK2-AS3-201ENST00000307548 MT1EP04732 61 aa4.67□□□□□ -1.66
SHANK2-AS3-201ENST00000307548 SPRR2EP22531 72 aa4.57□□□□□ -1.68
SHANK2-AS3-201ENST00000307548 SPRR2BP35325 72 aa4.57□□□□□ -1.68
SHANK2-AS3-201ENST00000307548 SPRR2AP35326 72 aa4.57□□□□□ -1.68
SHANK2-AS3-201ENST00000307548 MT1LQ93083 61 aa4.57□□□□□ -1.68
SHANK2-AS3-201ENST00000307548 KRTAP20-1Q3LI63 56 aa4.56□□□□□ -1.68
SHANK2-AS3-201ENST00000307548 KRTAP19-3Q7Z4W3 81 aa4.51□□□□□ -1.69
SHANK2-AS3-201ENST00000307548 SPRR5A0A1B0GTR4 108 aa4.5□□□□□ -1.69
SHANK2-AS3-201ENST00000307548 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
SHANK2-AS3-201ENST00000307548 MT1GP13640 62 aa4.48□□□□□ -1.69
SHANK2-AS3-201ENST00000307548 NDUFAF8A1L188 74 aa4.45□□□□□ -1.7
SHANK2-AS3-201ENST00000307548 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
SHANK2-AS3-201ENST00000307548 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
SHANK2-AS3-201ENST00000307548 SPRR2DP22532 72 aa4.41□□□□□ -1.7
SHANK2-AS3-201ENST00000307548 MT3P25713 68 aa4.41□□□□□ -1.7
SHANK2-AS3-201ENST00000307548 MT1MQ8N339 61 aa4.4□□□□□ -1.71
SHANK2-AS3-201ENST00000307548 DSTQ03001 7570 aaKnown RBP4.3□□□□□ -1.72
SHANK2-AS3-201ENST00000307548 KRTAP4-3Q9BYR4 195 aa4.3□□□□□ -1.72
SHANK2-AS3-201ENST00000307548 KRTAP2-2Q9BYT5 123 aa4.3□□□□□ -1.72
SHANK2-AS3-201ENST00000307548 KRTAP2-1Q9BYU5 128 aa4.3□□□□□ -1.72
SHANK2-AS3-201ENST00000307548 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
SHANK2-AS3-201ENST00000307548 KRTAP9-6A8MVA2 160 aa4.23□□□□□ -1.73
SHANK2-AS3-201ENST00000307548 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
SHANK2-AS3-201ENST00000307548 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
SHANK2-AS3-201ENST00000307548 KRTAP5-5Q701N2 237 aaPredicted RBP4.02□□□□□ -1.77
SHANK2-AS3-201ENST00000307548 GPR98Q8WXG9 6306 aa3.99□□□□□ -1.77
SHANK2-AS3-201ENST00000307548 HMCN1Q96RW7 5635 aa3.98□□□□□ -1.77
SHANK2-AS3-201ENST00000307548 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
SHANK2-AS3-201ENST00000307548 MT4P47944 62 aa3.9□□□□□ -1.78
SHANK2-AS3-201ENST00000307548 MT1AP04731 61 aa3.9□□□□□ -1.79
SHANK2-AS3-201ENST00000307548 AHNAK2Q8IVF2 5795 aa3.86□□□□□ -1.79
SHANK2-AS3-201ENST00000307548 KRTAP6-1Q3LI64 71 aa3.83□□□□□ -1.8
SHANK2-AS3-201ENST00000307548 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
SHANK2-AS3-201ENST00000307548 KRTAP12-4P60329 112 aa3.73□□□□□ -1.81
SHANK2-AS3-201ENST00000307548 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
SHANK2-AS3-201ENST00000307548 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
SHANK2-AS3-201ENST00000307548 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
SHANK2-AS3-201ENST00000307548 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
SHANK2-AS3-201ENST00000307548 KRTAP5-2Q701N4 177 aa3.55□□□□□ -1.84
SHANK2-AS3-201ENST00000307548 INE1O15225 51 aa3.46□□□□□ -1.85
SHANK2-AS3-201ENST00000307548 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
SHANK2-AS3-201ENST00000307548 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.86
SHANK2-AS3-201ENST00000307548 LCE3DQ9BYE3 92 aa3.36□□□□□ -1.87
SHANK2-AS3-201ENST00000307548 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
SHANK2-AS3-201ENST00000307548 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
SHANK2-AS3-201ENST00000307548 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
SHANK2-AS3-201ENST00000307548 MUC5ACP98088 5654 aa3.2□□□□□ -1.9
SHANK2-AS3-201ENST00000307548 AHNAKQ09666 5890 aaKnown RBP3.18□□□□□ -1.9
SHANK2-AS3-201ENST00000307548 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
SHANK2-AS3-201ENST00000307548 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
SHANK2-AS3-201ENST00000307548 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
SHANK2-AS3-201ENST00000307548 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
SHANK2-AS3-201ENST00000307548 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
SHANK2-AS3-201ENST00000307548 PRM1P04553 51 aa2.81□□□□□ -1.96
SHANK2-AS3-201ENST00000307548 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
SHANK2-AS3-201ENST00000307548 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
SHANK2-AS3-201ENST00000307548 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
SHANK2-AS3-201ENST00000307548 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
SHANK2-AS3-201ENST00000307548 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
SHANK2-AS3-201ENST00000307548 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 67.8 ms