RNA–Protein interactions for RNA: ENST00000305978.6

SCAND1-201, Transcript of SCAN domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAND1, Length 902 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAND1-201ENST00000305978 C10orf95Q9H7T3 257 aa5.57□□□□□ -1.52
SCAND1-201ENST00000305978 TNP1P09430 55 aa5.55□□□□□ -1.52
SCAND1-201ENST00000305978 LCE3AQ5TA76 89 aa5.55□□□□□ -1.52
SCAND1-201ENST00000305978 MT1MQ8N339 61 aa5.54□□□□□ -1.52
SCAND1-201ENST00000305978 MT1LQ93083 61 aa5.54□□□□□ -1.52
SCAND1-201ENST00000305978 KRTAP4-9Q9BYQ8 210 aa5.54□□□□□ -1.52
SCAND1-201ENST00000305978 A6NED7 52 aa5.5□□□□□ -1.53
SCAND1-201ENST00000305978 K7ERS5 55 aa5.43□□□□□ -1.54
SCAND1-201ENST00000305978 LCE1DQ5T752 114 aa5.42□□□□□ -1.54
SCAND1-201ENST00000305978 LCE4AQ5TA78 99 aa5.4□□□□□ -1.54
SCAND1-201ENST00000305978 KRTAP4-3Q9BYR4 195 aa5.4□□□□□ -1.54
SCAND1-201ENST00000305978 HMCN1Q96RW7 5635 aa5.38□□□□□ -1.55
SCAND1-201ENST00000305978 MT4P47944 62 aa5.33□□□□□ -1.56
SCAND1-201ENST00000305978 KRTAP12-3P60328 96 aa5.33□□□□□ -1.56
SCAND1-201ENST00000305978 CDC42SE1Q9NRR8 79 aa5.33□□□□□ -1.56
SCAND1-201ENST00000305978 KRTAP5-4Q6L8H1 288 aa5.31□□□□□ -1.56
SCAND1-201ENST00000305978 KRTAP4-7Q9BYR0 210 aa5.26□□□□□ -1.57
SCAND1-201ENST00000305978 KRTAP25-1Q3LHN0 102 aa5.22□□□□□ -1.57
SCAND1-201ENST00000305978 KRTAP4-6Q9BYQ5 205 aa5.19□□□□□ -1.58
SCAND1-201ENST00000305978 AHNAK2Q8IVF2 5795 aa5.17□□□□□ -1.58
SCAND1-201ENST00000305978 BRK1Q8WUW1 75 aa5.12□□□□□ -1.59
SCAND1-201ENST00000305978 ROMO1P60602 79 aa5.11□□□□□ -1.59
SCAND1-201ENST00000305978 KRTAP5-5Q701N2 237 aaPredicted RBP5.09□□□□□ -1.59
SCAND1-201ENST00000305978 KRTAP5-10Q6L8G5 202 aa5.07□□□□□ -1.6
SCAND1-201ENST00000305978 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
SCAND1-201ENST00000305978 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
SCAND1-201ENST00000305978 KRTAP20-2Q3LI61 65 aa5.01□□□□□ -1.61
SCAND1-201ENST00000305978 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
SCAND1-201ENST00000305978 SPRR5A0A1B0GTR4 108 aa4.98□□□□□ -1.61
SCAND1-201ENST00000305978 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.62
SCAND1-201ENST00000305978 KRTAP12-4P60329 112 aa4.94□□□□□ -1.62
SCAND1-201ENST00000305978 KRTAP5-3Q6L8H2 238 aa4.93□□□□□ -1.62
SCAND1-201ENST00000305978 LCE3CQ5T5A8 94 aa4.91□□□□□ -1.62
SCAND1-201ENST00000305978 KRTAP5-7Q6L8G8 165 aa4.91□□□□□ -1.62
SCAND1-201ENST00000305978 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
SCAND1-201ENST00000305978 PMAIP1Q13794 54 aa4.84□□□□□ -1.63
SCAND1-201ENST00000305978 PRO0628Q9UI54 55 aa4.79□□□□□ -1.64
SCAND1-201ENST00000305978 MT1AP04731 61 aa4.72□□□□□ -1.65
SCAND1-201ENST00000305978 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
SCAND1-201ENST00000305978 KRTAP5-2Q701N4 177 aa4.65□□□□□ -1.67
SCAND1-201ENST00000305978 KRTAP9-6A8MVA2 160 aa4.64□□□□□ -1.67
SCAND1-201ENST00000305978 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
SCAND1-201ENST00000305978 PRAC1Q96KF2 57 aa4.56□□□□□ -1.68
SCAND1-201ENST00000305978 KRTAP9-4Q9BYQ2 154 aa4.55□□□□□ -1.68
SCAND1-201ENST00000305978 KTN1-AS1Q86SY8 53 aa4.5□□□□□ -1.69
SCAND1-201ENST00000305978 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
SCAND1-201ENST00000305978 KRTAP5-8O75690 187 aa4.43□□□□□ -1.7
SCAND1-201ENST00000305978 AHNAKQ09666 5890 aaKnown RBP4.35□□□□□ -1.71
SCAND1-201ENST00000305978 MUC5ACP98088 5654 aa4.34□□□□□ -1.71
SCAND1-201ENST00000305978 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
SCAND1-201ENST00000305978 MT3P25713 68 aa4.3□□□□□ -1.72
SCAND1-201ENST00000305978 MUC5BQ9HC84 5762 aaPredicted RBP4.29□□□□□ -1.72
SCAND1-201ENST00000305978 SVIPQ8NHG7 77 aa4.27□□□□□ -1.73
SCAND1-201ENST00000305978 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
SCAND1-201ENST00000305978 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
SCAND1-201ENST00000305978 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
SCAND1-201ENST00000305978 LUZP6Q538Z0 58 aa3.82□□□□□ -1.8
SCAND1-201ENST00000305978 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
SCAND1-201ENST00000305978 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
SCAND1-201ENST00000305978 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
SCAND1-201ENST00000305978 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
SCAND1-201ENST00000305978 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
SCAND1-201ENST00000305978 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
SCAND1-201ENST00000305978 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
SCAND1-201ENST00000305978 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
SCAND1-201ENST00000305978 LCE3EQ5T5B0 92 aa3.3□□□□□ -1.88
SCAND1-201ENST00000305978 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
SCAND1-201ENST00000305978 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
SCAND1-201ENST00000305978 PHGR1C9JFL3 82 aa3□□□□□ -1.93
SCAND1-201ENST00000305978 A0A0A0MQY5 61 aa2.89□□□□□ -1.95
SCAND1-201ENST00000305978 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
SCAND1-201ENST00000305978 INE1O15225 51 aa2.81□□□□□ -1.96
SCAND1-201ENST00000305978 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
SCAND1-201ENST00000305978 PRM1P04553 51 aa2.63□□□□□ -1.99
SCAND1-201ENST00000305978 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
SCAND1-201ENST00000305978 H3BS24 57 aa2.22□□□□□ -2.05
SCAND1-201ENST00000305978 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 5.4 ms