RNA–Protein interactions for RNA: ENST00000304786.11

SRP9-201, Transcript of signal recognition particle 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP9, Length 1,480 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9-201ENST00000304786 MT1EP04732 61 aa5.01□□□□□ -1.61
SRP9-201ENST00000304786 KRTAP19-5Q3LI72 72 aa5□□□□□ -1.61
SRP9-201ENST00000304786 LCE5AQ5TCM9 118 aa4.99□□□□□ -1.61
SRP9-201ENST00000304786 PSPHP1O15172 72 aa4.98□□□□□ -1.61
SRP9-201ENST00000304786 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
SRP9-201ENST00000304786 MIR22HGQ0VDD5 57 aa4.96□□□□□ -1.62
SRP9-201ENST00000304786 Q1T7F1 81 aa4.94□□□□□ -1.62
SRP9-201ENST00000304786 LCE3AQ5TA76 89 aa4.94□□□□□ -1.62
SRP9-201ENST00000304786 KRTAP2-2Q9BYT5 123 aa4.94□□□□□ -1.62
SRP9-201ENST00000304786 KRTAP2-1Q9BYU5 128 aa4.94□□□□□ -1.62
SRP9-201ENST00000304786 TNP1P09430 55 aa4.94□□□□□ -1.62
SRP9-201ENST00000304786 PCP4P48539 62 aa4.94□□□□□ -1.62
SRP9-201ENST00000304786 KRTAP19-3Q7Z4W3 81 aa4.93□□□□□ -1.62
SRP9-201ENST00000304786 V9GYY9 64 aa4.92□□□□□ -1.62
SRP9-201ENST00000304786 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
SRP9-201ENST00000304786 MT1LQ93083 61 aa4.81□□□□□ -1.64
SRP9-201ENST00000304786 MT1GP13640 62 aa4.81□□□□□ -1.64
SRP9-201ENST00000304786 RPS28P62857 69 aaKnown RBP4.79□□□□□ -1.64
SRP9-201ENST00000304786 A6NED7 52 aa4.77□□□□□ -1.65
SRP9-201ENST00000304786 K7ERS5 55 aa4.77□□□□□ -1.65
SRP9-201ENST00000304786 MT1MQ8N339 61 aa4.77□□□□□ -1.65
SRP9-201ENST00000304786 A0A0A0MQY5 61 aa4.75□□□□□ -1.65
SRP9-201ENST00000304786 KRTAP12-3P60328 96 aa4.72□□□□□ -1.65
SRP9-201ENST00000304786 KRTAP25-1Q3LHN0 102 aa4.72□□□□□ -1.65
SRP9-201ENST00000304786 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
SRP9-201ENST00000304786 KRTAP4-3Q9BYR4 195 aa4.72□□□□□ -1.65
SRP9-201ENST00000304786 KRTAP15-1Q3LI76 137 aa4.57□□□□□ -1.68
SRP9-201ENST00000304786 CDC42SE1Q9NRR8 79 aa4.57□□□□□ -1.68
SRP9-201ENST00000304786 ROMO1P60602 79 aa4.53□□□□□ -1.68
SRP9-201ENST00000304786 MT4P47944 62 aa4.46□□□□□ -1.7
SRP9-201ENST00000304786 KRTAP5-4Q6L8H1 288 aa4.44□□□□□ -1.7
SRP9-201ENST00000304786 HMCN1Q96RW7 5635 aa4.41□□□□□ -1.7
SRP9-201ENST00000304786 LCE3CQ5T5A8 94 aa4.37□□□□□ -1.71
SRP9-201ENST00000304786 GPR98Q8WXG9 6306 aa4.35□□□□□ -1.71
SRP9-201ENST00000304786 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
SRP9-201ENST00000304786 SYNE1Q8NF91 8797 aaKnown RBP4.25□□□□□ -1.73
SRP9-201ENST00000304786 BRK1Q8WUW1 75 aa4.24□□□□□ -1.73
SRP9-201ENST00000304786 AHNAK2Q8IVF2 5795 aa4.21□□□□□ -1.74
SRP9-201ENST00000304786 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.2□□□□□ -1.74
SRP9-201ENST00000304786 KRTAP20-2Q3LI61 65 aa4.19□□□□□ -1.74
SRP9-201ENST00000304786 KRTAP9-6A8MVA2 160 aa4.18□□□□□ -1.74
SRP9-201ENST00000304786 KRTAP12-4P60329 112 aa4.15□□□□□ -1.75
SRP9-201ENST00000304786 SPRR5A0A1B0GTR4 108 aa4.14□□□□□ -1.75
SRP9-201ENST00000304786 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
SRP9-201ENST00000304786 MT1AP04731 61 aa4.08□□□□□ -1.76
SRP9-201ENST00000304786 KRTAP5-10Q6L8G5 202 aa4.08□□□□□ -1.76
SRP9-201ENST00000304786 PMAIP1Q13794 54 aa3.98□□□□□ -1.77
SRP9-201ENST00000304786 KRTAP5-2Q701N4 177 aa3.92□□□□□ -1.78
SRP9-201ENST00000304786 PRAC1Q96KF2 57 aa3.91□□□□□ -1.78
SRP9-201ENST00000304786 KRTAP5-7Q6L8G8 165 aa3.88□□□□□ -1.79
SRP9-201ENST00000304786 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
SRP9-201ENST00000304786 PRO0628Q9UI54 55 aa3.77□□□□□ -1.81
SRP9-201ENST00000304786 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
SRP9-201ENST00000304786 MT3P25713 68 aa3.71□□□□□ -1.82
SRP9-201ENST00000304786 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
SRP9-201ENST00000304786 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
SRP9-201ENST00000304786 NDUFAF8A1L188 74 aa3.6□□□□□ -1.83
SRP9-201ENST00000304786 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
SRP9-201ENST00000304786 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
SRP9-201ENST00000304786 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
SRP9-201ENST00000304786 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
SRP9-201ENST00000304786 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
SRP9-201ENST00000304786 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
SRP9-201ENST00000304786 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
SRP9-201ENST00000304786 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
SRP9-201ENST00000304786 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
SRP9-201ENST00000304786 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
SRP9-201ENST00000304786 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
SRP9-201ENST00000304786 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
SRP9-201ENST00000304786 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
SRP9-201ENST00000304786 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
SRP9-201ENST00000304786 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
SRP9-201ENST00000304786 PRM1P04553 51 aa2.35□□□□□ -2.03
SRP9-201ENST00000304786 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
SRP9-201ENST00000304786 INE1O15225 51 aa2.1□□□□□ -2.07
SRP9-201ENST00000304786 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
SRP9-201ENST00000304786 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 88.6 ms