RNA–Protein interactions for RNA: ENST00000304004.7

POLR1C-201, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 1 (best) BASIC

Gene POLR1C, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-201ENST00000304004 PRR15LQ9BU68 103 aa6.29□□□□□ -1.4
POLR1C-201ENST00000304004 PRO0628Q9UI54 55 aa6.28□□□□□ -1.4
POLR1C-201ENST00000304004 LINC01558Q9Y6Z2 57 aa6.24□□□□□ -1.41
POLR1C-201ENST00000304004 A8MU10 97 aa6.23□□□□□ -1.41
POLR1C-201ENST00000304004 KRTAP2-2Q9BYT5 123 aa6.21□□□□□ -1.42
POLR1C-201ENST00000304004 LCE1FQ5T754 118 aa6.17□□□□□ -1.42
POLR1C-201ENST00000304004 KRTAP2-3P0C7H8 128 aa6.16□□□□□ -1.42
POLR1C-201ENST00000304004 KRTAP2-4Q9BYR9 128 aa6.16□□□□□ -1.42
POLR1C-201ENST00000304004 SPRR2DP22532 72 aa6.13□□□□□ -1.43
POLR1C-201ENST00000304004 KRTAP5-3Q6L8H2 238 aa6.13□□□□□ -1.43
POLR1C-201ENST00000304004 UQCR11O14957 56 aa6.07□□□□□ -1.44
POLR1C-201ENST00000304004 KRTAP19-7Q3SYF9 63 aa6.06□□□□□ -1.44
POLR1C-201ENST00000304004 MT1EP04732 61 aa6.01□□□□□ -1.45
POLR1C-201ENST00000304004 C10orf95Q9H7T3 257 aa6.01□□□□□ -1.45
POLR1C-201ENST00000304004 LUZP6Q538Z0 58 aa5.99□□□□□ -1.45
POLR1C-201ENST00000304004 TNP1P09430 55 aa5.97□□□□□ -1.45
POLR1C-201ENST00000304004 KRTAP2-1Q9BYU5 128 aa5.96□□□□□ -1.46
POLR1C-201ENST00000304004 KRTAP19-5Q3LI72 72 aa5.95□□□□□ -1.46
POLR1C-201ENST00000304004 MIR22HGQ0VDD5 57 aa5.94□□□□□ -1.46
POLR1C-201ENST00000304004 Q1T7F1 81 aa5.93□□□□□ -1.46
POLR1C-201ENST00000304004 KRTAP19-3Q7Z4W3 81 aa5.93□□□□□ -1.46
POLR1C-201ENST00000304004 LCE3AQ5TA76 89 aa5.9□□□□□ -1.46
POLR1C-201ENST00000304004 K7ERS5 55 aa5.81□□□□□ -1.48
POLR1C-201ENST00000304004 MT1GP13640 62 aa5.79□□□□□ -1.48
POLR1C-201ENST00000304004 MT1LQ93083 61 aa5.77□□□□□ -1.49
POLR1C-201ENST00000304004 PP632Q6XCG6 107 aa5.76□□□□□ -1.49
POLR1C-201ENST00000304004 A6NED7 52 aa5.73□□□□□ -1.49
POLR1C-201ENST00000304004 RPS28P62857 69 aaKnown RBP5.73□□□□□ -1.49
POLR1C-201ENST00000304004 KRTAP25-1Q3LHN0 102 aa5.73□□□□□ -1.49
POLR1C-201ENST00000304004 DSTQ03001 7570 aaKnown RBP5.72□□□□□ -1.49
POLR1C-201ENST00000304004 MT1MQ8N339 61 aa5.71□□□□□ -1.5
POLR1C-201ENST00000304004 KRTAP12-3P60328 96 aa5.68□□□□□ -1.5
POLR1C-201ENST00000304004 LCE3CQ5T5A8 94 aa5.68□□□□□ -1.5
POLR1C-201ENST00000304004 KRTAP4-3Q9BYR4 195 aa5.55□□□□□ -1.52
POLR1C-201ENST00000304004 PMAIP1Q13794 54 aa5.54□□□□□ -1.52
POLR1C-201ENST00000304004 CDC42SE1Q9NRR8 79 aa5.53□□□□□ -1.52
POLR1C-201ENST00000304004 ROMO1P60602 79 aa5.44□□□□□ -1.54
POLR1C-201ENST00000304004 KRTAP5-4Q6L8H1 288 aa5.36□□□□□ -1.55
POLR1C-201ENST00000304004 MT4P47944 62 aa5.33□□□□□ -1.56
POLR1C-201ENST00000304004 HMCN1Q96RW7 5635 aa5.29□□□□□ -1.56
POLR1C-201ENST00000304004 GPR98Q8WXG9 6306 aa5.26□□□□□ -1.57
POLR1C-201ENST00000304004 KRTAP5-5Q701N2 237 aaPredicted RBP5.23□□□□□ -1.57
POLR1C-201ENST00000304004 LCE3EQ5T5B0 92 aa5.18□□□□□ -1.58
POLR1C-201ENST00000304004 AHNAK2Q8IVF2 5795 aa5.08□□□□□ -1.6
POLR1C-201ENST00000304004 BRK1Q8WUW1 75 aa5.07□□□□□ -1.6
POLR1C-201ENST00000304004 KRTAP20-2Q3LI61 65 aa5.05□□□□□ -1.6
POLR1C-201ENST00000304004 SPRR5A0A1B0GTR4 108 aa5.04□□□□□ -1.6
POLR1C-201ENST00000304004 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
POLR1C-201ENST00000304004 LCE1EQ5T753 118 aa5.01□□□□□ -1.61
POLR1C-201ENST00000304004 KRTAP9-6A8MVA2 160 aa4.94□□□□□ -1.62
POLR1C-201ENST00000304004 KRTAP5-10Q6L8G5 202 aa4.93□□□□□ -1.62
POLR1C-201ENST00000304004 MT1AP04731 61 aa4.92□□□□□ -1.62
POLR1C-201ENST00000304004 SYNE1Q8NF91 8797 aaKnown RBP4.92□□□□□ -1.62
POLR1C-201ENST00000304004 KRTAP6-1Q3LI64 71 aa4.86□□□□□ -1.63
POLR1C-201ENST00000304004 KTN1-AS1Q86SY8 53 aa4.82□□□□□ -1.64
POLR1C-201ENST00000304004 KRTAP5-2Q701N4 177 aa4.74□□□□□ -1.65
POLR1C-201ENST00000304004 KRTAP5-7Q6L8G8 165 aa4.72□□□□□ -1.65
POLR1C-201ENST00000304004 KRTAP6-2Q3LI66 62 aa4.62□□□□□ -1.67
POLR1C-201ENST00000304004 LCE3DQ9BYE3 92 aa4.53□□□□□ -1.68
POLR1C-201ENST00000304004 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.49□□□□□ -1.69
POLR1C-201ENST00000304004 KRTAP5-11Q6L8G4 156 aa4.48□□□□□ -1.69
POLR1C-201ENST00000304004 KRTAP5-8O75690 187 aa4.41□□□□□ -1.7
POLR1C-201ENST00000304004 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
POLR1C-201ENST00000304004 KRTAP5-1Q6L8H4 278 aa4.2□□□□□ -1.74
POLR1C-201ENST00000304004 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
POLR1C-201ENST00000304004 MUC5BQ9HC84 5762 aaPredicted RBP4.11□□□□□ -1.75
POLR1C-201ENST00000304004 AHNAKQ09666 5890 aaKnown RBP4.1□□□□□ -1.75
POLR1C-201ENST00000304004 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
POLR1C-201ENST00000304004 INE1O15225 51 aa3.8□□□□□ -1.8
POLR1C-201ENST00000304004 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
POLR1C-201ENST00000304004 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
POLR1C-201ENST00000304004 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
POLR1C-201ENST00000304004 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
POLR1C-201ENST00000304004 PRM1P04553 51 aa2.79□□□□□ -1.96
POLR1C-201ENST00000304004 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
POLR1C-201ENST00000304004 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
POLR1C-201ENST00000304004 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms