RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 A8MU10 97 aa4.13□□□□□ -1.75
CLCC1-201ENST00000302500 A0A1B0GU69 56 aa4.11□□□□□ -1.75
CLCC1-201ENST00000302500 KRTAP19-5Q3LI72 72 aa4.11□□□□□ -1.75
CLCC1-201ENST00000302500 SPINT4Q6UDR6 99 aa4.11□□□□□ -1.75
CLCC1-201ENST00000302500 C10orf95Q9H7T3 257 aa4.09□□□□□ -1.75
CLCC1-201ENST00000302500 SMIM26A0A096LP01 95 aa4.06□□□□□ -1.76
CLCC1-201ENST00000302500 ATP5EP56381 51 aaPredicted RBP4.06□□□□□ -1.76
CLCC1-201ENST00000302500 LINC01558Q9Y6Z2 57 aa4.05□□□□□ -1.76
CLCC1-201ENST00000302500 MT1GP13640 62 aa4.04□□□□□ -1.76
CLCC1-201ENST00000302500 MT1LQ93083 61 aa4.04□□□□□ -1.76
CLCC1-201ENST00000302500 LCE3AQ5TA76 89 aa4.02□□□□□ -1.77
CLCC1-201ENST00000302500 MT1MQ8N339 61 aa4.01□□□□□ -1.77
CLCC1-201ENST00000302500 TMEM258P61165 79 aa3.98□□□□□ -1.77
CLCC1-201ENST00000302500 MT3P25713 68 aa3.94□□□□□ -1.78
CLCC1-201ENST00000302500 TNP1P09430 55 aa3.93□□□□□ -1.78
CLCC1-201ENST00000302500 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
CLCC1-201ENST00000302500 PRR15LQ9BU68 103 aa3.92□□□□□ -1.78
CLCC1-201ENST00000302500 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.79
CLCC1-201ENST00000302500 PP632Q6XCG6 107 aa3.9□□□□□ -1.79
CLCC1-201ENST00000302500 HMCN1Q96RW7 5635 aa3.88□□□□□ -1.79
CLCC1-201ENST00000302500 UQCR11O14957 56 aa3.87□□□□□ -1.79
CLCC1-201ENST00000302500 GPR98Q8WXG9 6306 aa3.84□□□□□ -1.79
CLCC1-201ENST00000302500 KRTAP12-3P60328 96 aa3.84□□□□□ -1.79
CLCC1-201ENST00000302500 MIR22HGQ0VDD5 57 aa3.78□□□□□ -1.8
CLCC1-201ENST00000302500 Q1T7F1 81 aa3.78□□□□□ -1.8
CLCC1-201ENST00000302500 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
CLCC1-201ENST00000302500 KRTAP25-1Q3LHN0 102 aa3.75□□□□□ -1.81
CLCC1-201ENST00000302500 MT4P47944 62 aa3.74□□□□□ -1.81
CLCC1-201ENST00000302500 PSPHP1O15172 72 aa3.71□□□□□ -1.81
CLCC1-201ENST00000302500 PRAC1Q96KF2 57 aa3.71□□□□□ -1.81
CLCC1-201ENST00000302500 AHNAK2Q8IVF2 5795 aa3.71□□□□□ -1.81
CLCC1-201ENST00000302500 V9GYY9 64 aa3.69□□□□□ -1.82
CLCC1-201ENST00000302500 SYNE1Q8NF91 8797 aaKnown RBP3.65□□□□□ -1.82
CLCC1-201ENST00000302500 NDUFAF8A1L188 74 aa3.65□□□□□ -1.83
CLCC1-201ENST00000302500 KRTAP5-10Q6L8G5 202 aa3.64□□□□□ -1.83
CLCC1-201ENST00000302500 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
CLCC1-201ENST00000302500 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
CLCC1-201ENST00000302500 RPS28P62857 69 aaKnown RBP3.59□□□□□ -1.83
CLCC1-201ENST00000302500 K7ERS5 55 aa3.57□□□□□ -1.84
CLCC1-201ENST00000302500 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
CLCC1-201ENST00000302500 A6NED7 52 aa3.53□□□□□ -1.84
CLCC1-201ENST00000302500 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
CLCC1-201ENST00000302500 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
CLCC1-201ENST00000302500 CDC42SE1Q9NRR8 79 aa3.47□□□□□ -1.85
CLCC1-201ENST00000302500 ROMO1P60602 79 aa3.46□□□□□ -1.85
CLCC1-201ENST00000302500 KRTAP12-4P60329 112 aa3.45□□□□□ -1.86
CLCC1-201ENST00000302500 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
CLCC1-201ENST00000302500 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
CLCC1-201ENST00000302500 MT1AP04731 61 aa3.42□□□□□ -1.86
CLCC1-201ENST00000302500 KRTAP6-1Q3LI64 71 aa3.42□□□□□ -1.86
CLCC1-201ENST00000302500 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
CLCC1-201ENST00000302500 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
CLCC1-201ENST00000302500 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
CLCC1-201ENST00000302500 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
CLCC1-201ENST00000302500 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
CLCC1-201ENST00000302500 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
CLCC1-201ENST00000302500 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
CLCC1-201ENST00000302500 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
CLCC1-201ENST00000302500 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
CLCC1-201ENST00000302500 BRK1Q8WUW1 75 aa3.01□□□□□ -1.93
CLCC1-201ENST00000302500 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
CLCC1-201ENST00000302500 PRO0628Q9UI54 55 aa2.99□□□□□ -1.93
CLCC1-201ENST00000302500 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
CLCC1-201ENST00000302500 PMAIP1Q13794 54 aa2.85□□□□□ -1.95
CLCC1-201ENST00000302500 KTN1-AS1Q86SY8 53 aa2.75□□□□□ -1.97
CLCC1-201ENST00000302500 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
CLCC1-201ENST00000302500 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
CLCC1-201ENST00000302500 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
CLCC1-201ENST00000302500 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
CLCC1-201ENST00000302500 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
CLCC1-201ENST00000302500 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
CLCC1-201ENST00000302500 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
CLCC1-201ENST00000302500 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
CLCC1-201ENST00000302500 INE1O15225 51 aa1.91□□□□□ -2.1
CLCC1-201ENST00000302500 PRM1P04553 51 aa1.78□□□□□ -2.12
CLCC1-201ENST00000302500 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
CLCC1-201ENST00000302500 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms