RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 KMT2DO14686 5537 aa3.92□□□□□ -1.78
COPS2-201ENST00000299259 FCGBPQ9Y6R7 5405 aaPredicted RBP3.9□□□□□ -1.78
COPS2-201ENST00000299259 CRCT1Q9UGL9 99 aa3.87□□□□□ -1.79
COPS2-201ENST00000299259 KRTAP19-7Q3SYF9 63 aa3.87□□□□□ -1.79
COPS2-201ENST00000299259 LCE5AQ5TCM9 118 aa3.83□□□□□ -1.8
COPS2-201ENST00000299259 LCE4AQ5TA78 99 aa3.83□□□□□ -1.8
COPS2-201ENST00000299259 MT1EP04732 61 aa3.8□□□□□ -1.8
COPS2-201ENST00000299259 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
COPS2-201ENST00000299259 MT1LQ93083 61 aa3.73□□□□□ -1.81
COPS2-201ENST00000299259 LUZP6Q538Z0 58 aa3.72□□□□□ -1.81
COPS2-201ENST00000299259 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
COPS2-201ENST00000299259 KRTAP19-4Q3LI73 84 aa3.7□□□□□ -1.82
COPS2-201ENST00000299259 SPRR2FQ96RM1 72 aa3.7□□□□□ -1.82
COPS2-201ENST00000299259 MACF1Q9UPN3 7388 aaKnown RBP3.69□□□□□ -1.82
COPS2-201ENST00000299259 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
COPS2-201ENST00000299259 KRTAP19-3Q7Z4W3 81 aa3.65□□□□□ -1.83
COPS2-201ENST00000299259 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
COPS2-201ENST00000299259 KRTAP5-9P26371 169 aa3.62□□□□□ -1.83
COPS2-201ENST00000299259 MUC12Q9UKN1 5478 aa3.61□□□□□ -1.83
COPS2-201ENST00000299259 MT1GP13640 62 aa3.6□□□□□ -1.83
COPS2-201ENST00000299259 SYNE2Q8WXH0 6885 aaKnown RBP3.58□□□□□ -1.84
COPS2-201ENST00000299259 MT1MQ8N339 61 aa3.58□□□□□ -1.84
COPS2-201ENST00000299259 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
COPS2-201ENST00000299259 KRTAP6-3Q3LI67 103 aa3.51□□□□□ -1.85
COPS2-201ENST00000299259 LCE1AQ5T7P2 110 aa3.51□□□□□ -1.85
COPS2-201ENST00000299259 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
COPS2-201ENST00000299259 SPRR2EP22531 72 aa3.49□□□□□ -1.85
COPS2-201ENST00000299259 SPRR2BP35325 72 aa3.49□□□□□ -1.85
COPS2-201ENST00000299259 SPRR2AP35326 72 aa3.49□□□□□ -1.85
COPS2-201ENST00000299259 MDN1Q9NU22 5596 aa3.42□□□□□ -1.86
COPS2-201ENST00000299259 A0A0A0MQY5 61 aa3.42□□□□□ -1.86
COPS2-201ENST00000299259 SPRR2DP22532 72 aa3.36□□□□□ -1.87
COPS2-201ENST00000299259 KRTAP2-3P0C7H8 128 aa3.27□□□□□ -1.89
COPS2-201ENST00000299259 KRTAP2-4Q9BYR9 128 aa3.27□□□□□ -1.89
COPS2-201ENST00000299259 KRTAP2-1Q9BYU5 128 aa3.27□□□□□ -1.89
COPS2-201ENST00000299259 DSTQ03001 7570 aaKnown RBP3.27□□□□□ -1.89
COPS2-201ENST00000299259 NEBP20929 6669 aa3.24□□□□□ -1.89
COPS2-201ENST00000299259 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
COPS2-201ENST00000299259 KRTAP5-5Q701N2 237 aaPredicted RBP3.22□□□□□ -1.89
COPS2-201ENST00000299259 MT1AP04731 61 aa3.17□□□□□ -1.9
COPS2-201ENST00000299259 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
COPS2-201ENST00000299259 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.92
COPS2-201ENST00000299259 INE1O15225 51 aa3.02□□□□□ -1.93
COPS2-201ENST00000299259 KRTAP20-1Q3LI63 56 aa3□□□□□ -1.93
COPS2-201ENST00000299259 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
COPS2-201ENST00000299259 SYNE1Q8NF91 8797 aaKnown RBP2.97□□□□□ -1.93
COPS2-201ENST00000299259 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
COPS2-201ENST00000299259 MT4P47944 62 aa2.92□□□□□ -1.94
COPS2-201ENST00000299259 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
COPS2-201ENST00000299259 MT3P25713 68 aa2.86□□□□□ -1.95
COPS2-201ENST00000299259 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
COPS2-201ENST00000299259 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
COPS2-201ENST00000299259 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
COPS2-201ENST00000299259 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
COPS2-201ENST00000299259 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
COPS2-201ENST00000299259 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
COPS2-201ENST00000299259 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
COPS2-201ENST00000299259 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
COPS2-201ENST00000299259 OBSCNQ5VST9 7968 aa2.6□□□□□ -1.99
COPS2-201ENST00000299259 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
COPS2-201ENST00000299259 PRM1P04553 51 aa2.42□□□□□ -2.02
COPS2-201ENST00000299259 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
COPS2-201ENST00000299259 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
COPS2-201ENST00000299259 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
COPS2-201ENST00000299259 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.04
COPS2-201ENST00000299259 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
COPS2-201ENST00000299259 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
COPS2-201ENST00000299259 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
COPS2-201ENST00000299259 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
COPS2-201ENST00000299259 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
COPS2-201ENST00000299259 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
COPS2-201ENST00000299259 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
COPS2-201ENST00000299259 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
COPS2-201ENST00000299259 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
COPS2-201ENST00000299259 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
COPS2-201ENST00000299259 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
COPS2-201ENST00000299259 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 6.3 ms