RNA–Protein interactions for RNA: ENST00000298231.5

PHOX2A-201, Transcript of paired like homeobox 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHOX2A, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2A-201ENST00000298231 KRTAP19-4Q3LI73 84 aa9.61□□□□□ -0.87
PHOX2A-201ENST00000298231 KRTAP19-7Q3SYF9 63 aa9.59□□□□□ -0.87
PHOX2A-201ENST00000298231 KMT2DO14686 5537 aa9.57□□□□□ -0.88
PHOX2A-201ENST00000298231 LCE3CQ5T5A8 94 aa9.55□□□□□ -0.88
PHOX2A-201ENST00000298231 MT1EP04732 61 aa9.41□□□□□ -0.9
PHOX2A-201ENST00000298231 SPRR2FQ96RM1 72 aa9.4□□□□□ -0.9
PHOX2A-201ENST00000298231 A0A0A0MQY5 61 aa9.36□□□□□ -0.91
PHOX2A-201ENST00000298231 MDN1Q9NU22 5596 aa9.36□□□□□ -0.91
PHOX2A-201ENST00000298231 MT1LQ93083 61 aa9.31□□□□□ -0.92
PHOX2A-201ENST00000298231 KRTAP20-1Q3LI63 56 aa9.3□□□□□ -0.92
PHOX2A-201ENST00000298231 SPRR2EP22531 72 aa9.17□□□□□ -0.94
PHOX2A-201ENST00000298231 SPRR2BP35325 72 aa9.17□□□□□ -0.94
PHOX2A-201ENST00000298231 SPRR2AP35326 72 aa9.17□□□□□ -0.94
PHOX2A-201ENST00000298231 LCE1AQ5T7P2 110 aa9.13□□□□□ -0.95
PHOX2A-201ENST00000298231 KRTAP9-6A8MVA2 160 aa9□□□□□ -0.97
PHOX2A-201ENST00000298231 KRTAP2-3P0C7H8 128 aa9□□□□□ -0.97
PHOX2A-201ENST00000298231 KRTAP2-4Q9BYR9 128 aa9□□□□□ -0.97
PHOX2A-201ENST00000298231 KRTAP4-7Q9BYR0 210 aa8.99□□□□□ -0.97
PHOX2A-201ENST00000298231 KRTAP19-3Q7Z4W3 81 aa8.93□□□□□ -0.98
PHOX2A-201ENST00000298231 MT1GP13640 62 aa8.91□□□□□ -0.98
PHOX2A-201ENST00000298231 SPRR2DP22532 72 aa8.86□□□□□ -0.99
PHOX2A-201ENST00000298231 MT1MQ8N339 61 aa8.81□□□□□ -1
PHOX2A-201ENST00000298231 LCE5AQ5TCM9 118 aa8.72□□□□□ -1.01
PHOX2A-201ENST00000298231 KRTAP2-2Q9BYT5 123 aa8.7□□□□□ -1.02
PHOX2A-201ENST00000298231 KRTAP2-1Q9BYU5 128 aa8.7□□□□□ -1.02
PHOX2A-201ENST00000298231 INE1O15225 51 aa8.68□□□□□ -1.02
PHOX2A-201ENST00000298231 LCE3BQ5TA77 95 aa8.59□□□□□ -1.03
PHOX2A-201ENST00000298231 KRTAP4-3Q9BYR4 195 aa8.58□□□□□ -1.04
PHOX2A-201ENST00000298231 LOC100996750A0A140TA64 210 aa8.41□□□□□ -1.06
PHOX2A-201ENST00000298231 DSTQ03001 7570 aaKnown RBP8.33□□□□□ -1.08
PHOX2A-201ENST00000298231 KRTAP4-9Q9BYQ8 210 aa7.95□□□□□ -1.14
PHOX2A-201ENST00000298231 MT1AP04731 61 aa7.94□□□□□ -1.14
PHOX2A-201ENST00000298231 GPR98Q8WXG9 6306 aa7.91□□□□□ -1.14
PHOX2A-201ENST00000298231 KRTAP5-5Q701N2 237 aaPredicted RBP7.9□□□□□ -1.14
PHOX2A-201ENST00000298231 LCE4AQ5TA78 99 aa7.89□□□□□ -1.15
PHOX2A-201ENST00000298231 KRTAP5-4Q6L8H1 288 aa7.84□□□□□ -1.15
PHOX2A-201ENST00000298231 KRTAP6-1Q3LI64 71 aa7.8□□□□□ -1.16
PHOX2A-201ENST00000298231 LCE1DQ5T752 114 aa7.76□□□□□ -1.17
PHOX2A-201ENST00000298231 MT4P47944 62 aa7.7□□□□□ -1.18
PHOX2A-201ENST00000298231 HMCN1Q96RW7 5635 aa7.65□□□□□ -1.19
PHOX2A-201ENST00000298231 KRTAP4-6Q9BYQ5 205 aa7.55□□□□□ -1.2
PHOX2A-201ENST00000298231 KRTAP9-4Q9BYQ2 154 aa7.45□□□□□ -1.22
PHOX2A-201ENST00000298231 KRTAP12-4P60329 112 aa7.42□□□□□ -1.22
PHOX2A-201ENST00000298231 AHNAK2Q8IVF2 5795 aa7.42□□□□□ -1.22
PHOX2A-201ENST00000298231 KRTAP20-2Q3LI61 65 aa7.35□□□□□ -1.23
PHOX2A-201ENST00000298231 SYNE1Q8NF91 8797 aaKnown RBP7.33□□□□□ -1.24
PHOX2A-201ENST00000298231 KRTAP5-10Q6L8G5 202 aa7.29□□□□□ -1.24
PHOX2A-201ENST00000298231 LCE3DQ9BYE3 92 aa7.27□□□□□ -1.25
PHOX2A-201ENST00000298231 LCE3EQ5T5B0 92 aa7.16□□□□□ -1.26
PHOX2A-201ENST00000298231 MT3P25713 68 aa7.15□□□□□ -1.27
PHOX2A-201ENST00000298231 KRTAP5-3Q6L8H2 238 aa7.13□□□□□ -1.27
PHOX2A-201ENST00000298231 KRTAP6-2Q3LI66 62 aa7.07□□□□□ -1.28
PHOX2A-201ENST00000298231 KRTAP5-7Q6L8G8 165 aa7.03□□□□□ -1.28
PHOX2A-201ENST00000298231 KRTAP5-2Q701N4 177 aa6.95□□□□□ -1.3
PHOX2A-201ENST00000298231 KRTAP4-11Q9BYQ6 195 aa6.61□□□□□ -1.35
PHOX2A-201ENST00000298231 PRM1P04553 51 aa6.49□□□□□ -1.37
PHOX2A-201ENST00000298231 KRTAP5-8O75690 187 aa6.39□□□□□ -1.39
PHOX2A-201ENST00000298231 OBSCNQ5VST9 7968 aa6.34□□□□□ -1.4
PHOX2A-201ENST00000298231 MUC5BQ9HC84 5762 aaPredicted RBP6.17□□□□□ -1.42
PHOX2A-201ENST00000298231 MUC5ACP98088 5654 aa6.15□□□□□ -1.42
PHOX2A-201ENST00000298231 KRTAP5-1Q6L8H4 278 aa6.14□□□□□ -1.43
PHOX2A-201ENST00000298231 AHNAKQ09666 5890 aaKnown RBP6.13□□□□□ -1.43
PHOX2A-201ENST00000298231 LCE1EQ5T753 118 aa6.09□□□□□ -1.43
PHOX2A-201ENST00000298231 KRTAP9-9Q9BYP9 154 aa6.01□□□□□ -1.45
PHOX2A-201ENST00000298231 LCE1CQ5T751 118 aa5.67□□□□□ -1.5
PHOX2A-201ENST00000298231 LCE1BQ5T7P3 118 aa5.67□□□□□ -1.5
PHOX2A-201ENST00000298231 KRTAP4-2Q9BYR5 136 aa5.66□□□□□ -1.5
PHOX2A-201ENST00000298231 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.4□□□□□ -1.55
PHOX2A-201ENST00000298231 KRTAP21-2Q3LI59 83 aa5.11□□□□□ -1.59
PHOX2A-201ENST00000298231 KRTAP5-11Q6L8G4 156 aa5.05□□□□□ -1.6
PHOX2A-201ENST00000298231 KRTAP4-12Q9BQ66 201 aa4.92□□□□□ -1.62
PHOX2A-201ENST00000298231 LCE1FQ5T754 118 aa4.81□□□□□ -1.64
PHOX2A-201ENST00000298231 KRTAP4-4Q9BYR3 166 aa4.41□□□□□ -1.7
PHOX2A-201ENST00000298231 PHGR1C9JFL3 82 aa4.34□□□□□ -1.71
PHOX2A-201ENST00000298231 KRTAP21-1Q3LI58 79 aa4.11□□□□□ -1.75
PHOX2A-201ENST00000298231 MUC19Q7Z5P9 8384 aa3.88□□□□□ -1.79
PHOX2A-201ENST00000298231 MUC16Q8WXI7 14507 aa2.84□□□□□ -1.96
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms