RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 NEBP20929 6669 aa4.76□□□□□ -1.65
HMGB2-201ENST00000296503 TNP1P09430 55 aa4.75□□□□□ -1.65
HMGB2-201ENST00000296503 SPRR2EP22531 72 aa4.72□□□□□ -1.65
HMGB2-201ENST00000296503 SPRR2BP35325 72 aa4.72□□□□□ -1.65
HMGB2-201ENST00000296503 SPRR2AP35326 72 aa4.72□□□□□ -1.65
HMGB2-201ENST00000296503 MDN1Q9NU22 5596 aa4.68□□□□□ -1.66
HMGB2-201ENST00000296503 KRTAP20-1Q3LI63 56 aa4.66□□□□□ -1.66
HMGB2-201ENST00000296503 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.66
HMGB2-201ENST00000296503 KRTAP2-3P0C7H8 128 aa4.59□□□□□ -1.67
HMGB2-201ENST00000296503 KRTAP2-4Q9BYR9 128 aa4.59□□□□□ -1.67
HMGB2-201ENST00000296503 INE1O15225 51 aa4.58□□□□□ -1.68
HMGB2-201ENST00000296503 SPRR2DP22532 72 aa4.56□□□□□ -1.68
HMGB2-201ENST00000296503 KRTAP19-7Q3SYF9 63 aa4.51□□□□□ -1.69
HMGB2-201ENST00000296503 MT1EP04732 61 aa4.47□□□□□ -1.69
HMGB2-201ENST00000296503 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
HMGB2-201ENST00000296503 KRTAP2-2Q9BYT5 123 aa4.45□□□□□ -1.7
HMGB2-201ENST00000296503 KRTAP2-1Q9BYU5 128 aa4.45□□□□□ -1.7
HMGB2-201ENST00000296503 LCE3AQ5TA76 89 aa4.43□□□□□ -1.7
HMGB2-201ENST00000296503 LCE3BQ5TA77 95 aa4.43□□□□□ -1.7
HMGB2-201ENST00000296503 KRTAP19-3Q7Z4W3 81 aa4.41□□□□□ -1.7
HMGB2-201ENST00000296503 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
HMGB2-201ENST00000296503 KRTAP4-12Q9BQ66 201 aa4.38□□□□□ -1.71
HMGB2-201ENST00000296503 MT1GP13640 62 aa4.34□□□□□ -1.71
HMGB2-201ENST00000296503 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
HMGB2-201ENST00000296503 KRTAP9-4Q9BYQ2 154 aa4.34□□□□□ -1.71
HMGB2-201ENST00000296503 MT1LQ93083 61 aa4.3□□□□□ -1.72
HMGB2-201ENST00000296503 KRTAP12-3P60328 96 aa4.26□□□□□ -1.73
HMGB2-201ENST00000296503 DSTQ03001 7570 aaKnown RBP4.26□□□□□ -1.73
HMGB2-201ENST00000296503 MT1MQ8N339 61 aa4.25□□□□□ -1.73
HMGB2-201ENST00000296503 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
HMGB2-201ENST00000296503 KRTAP4-7Q9BYR0 210 aa4.12□□□□□ -1.75
HMGB2-201ENST00000296503 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.75
HMGB2-201ENST00000296503 LCE1DQ5T752 114 aa4.07□□□□□ -1.76
HMGB2-201ENST00000296503 LCE4AQ5TA78 99 aa4.03□□□□□ -1.76
HMGB2-201ENST00000296503 KRTAP19-4Q3LI73 84 aa4.01□□□□□ -1.77
HMGB2-201ENST00000296503 MT4P47944 62 aa3.99□□□□□ -1.77
HMGB2-201ENST00000296503 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
HMGB2-201ENST00000296503 KRTAP4-2Q9BYR5 136 aa3.98□□□□□ -1.77
HMGB2-201ENST00000296503 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
HMGB2-201ENST00000296503 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
HMGB2-201ENST00000296503 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
HMGB2-201ENST00000296503 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.8
HMGB2-201ENST00000296503 HMCN1Q96RW7 5635 aa3.83□□□□□ -1.8
HMGB2-201ENST00000296503 GPR98Q8WXG9 6306 aa3.8□□□□□ -1.8
HMGB2-201ENST00000296503 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.8
HMGB2-201ENST00000296503 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
HMGB2-201ENST00000296503 KRTAP20-2Q3LI61 65 aa3.73□□□□□ -1.81
HMGB2-201ENST00000296503 SYNE1Q8NF91 8797 aaKnown RBP3.7□□□□□ -1.82
HMGB2-201ENST00000296503 MT1AP04731 61 aa3.66□□□□□ -1.82
HMGB2-201ENST00000296503 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.83
HMGB2-201ENST00000296503 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
HMGB2-201ENST00000296503 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
HMGB2-201ENST00000296503 KRTAP5-7Q6L8G8 165 aa3.49□□□□□ -1.85
HMGB2-201ENST00000296503 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
HMGB2-201ENST00000296503 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
HMGB2-201ENST00000296503 MT3P25713 68 aa3.37□□□□□ -1.87
HMGB2-201ENST00000296503 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
HMGB2-201ENST00000296503 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
HMGB2-201ENST00000296503 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
HMGB2-201ENST00000296503 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
HMGB2-201ENST00000296503 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
HMGB2-201ENST00000296503 PRM1P04553 51 aa3.03□□□□□ -1.93
HMGB2-201ENST00000296503 LCE1EQ5T753 118 aa3.03□□□□□ -1.93
HMGB2-201ENST00000296503 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
HMGB2-201ENST00000296503 MUC5ACP98088 5654 aa2.99□□□□□ -1.93
HMGB2-201ENST00000296503 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
HMGB2-201ENST00000296503 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
HMGB2-201ENST00000296503 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
HMGB2-201ENST00000296503 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
HMGB2-201ENST00000296503 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
HMGB2-201ENST00000296503 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
HMGB2-201ENST00000296503 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
HMGB2-201ENST00000296503 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
HMGB2-201ENST00000296503 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
HMGB2-201ENST00000296503 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
HMGB2-201ENST00000296503 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
HMGB2-201ENST00000296503 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 14.6 ms