RNA–Protein interactions for RNA: ENST00000296029.3

PF4-201, Transcript of platelet factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PF4, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PF4-201ENST00000296029 TNP1P09430 55 aa6□□□□□ -1.45
PF4-201ENST00000296029 LCE1DQ5T752 114 aa5.99□□□□□ -1.45
PF4-201ENST00000296029 CCDC179H3BU77 68 aa5.96□□□□□ -1.46
PF4-201ENST00000296029 LCE4AQ5TA78 99 aa5.96□□□□□ -1.46
PF4-201ENST00000296029 KRTAP4-2Q9BYR5 136 aa5.94□□□□□ -1.46
PF4-201ENST00000296029 ATP5EP56381 51 aaPredicted RBP5.93□□□□□ -1.46
PF4-201ENST00000296029 PRR15LQ9BU68 103 aa5.93□□□□□ -1.46
PF4-201ENST00000296029 KRTAP4-3Q9BYR4 195 aa5.91□□□□□ -1.46
PF4-201ENST00000296029 LINC01558Q9Y6Z2 57 aa5.89□□□□□ -1.47
PF4-201ENST00000296029 MT4P47944 62 aa5.87□□□□□ -1.47
PF4-201ENST00000296029 KRTAP5-4Q6L8H1 288 aa5.87□□□□□ -1.47
PF4-201ENST00000296029 KRTAP5-3Q6L8H2 238 aa5.87□□□□□ -1.47
PF4-201ENST00000296029 AHNAK2Q8IVF2 5795 aa5.79□□□□□ -1.48
PF4-201ENST00000296029 KRTAP12-3P60328 96 aa5.79□□□□□ -1.48
PF4-201ENST00000296029 UQCR11O14957 56 aa5.75□□□□□ -1.49
PF4-201ENST00000296029 TMEM258P61165 79 aa5.72□□□□□ -1.49
PF4-201ENST00000296029 KRTAP25-1Q3LHN0 102 aa5.63□□□□□ -1.51
PF4-201ENST00000296029 KRTAP5-10Q6L8G5 202 aa5.63□□□□□ -1.51
PF4-201ENST00000296029 MIR22HGQ0VDD5 57 aa5.6□□□□□ -1.51
PF4-201ENST00000296029 KRTAP5-5Q701N2 237 aaPredicted RBP5.6□□□□□ -1.51
PF4-201ENST00000296029 KRTAP20-2Q3LI61 65 aa5.52□□□□□ -1.53
PF4-201ENST00000296029 KRTAP4-11Q9BYQ6 195 aa5.52□□□□□ -1.53
PF4-201ENST00000296029 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
PF4-201ENST00000296029 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
PF4-201ENST00000296029 K7ERS5 55 aa5.49□□□□□ -1.53
PF4-201ENST00000296029 KRTAP23-1A1A580 65 aa5.44□□□□□ -1.54
PF4-201ENST00000296029 V9GYY9 64 aa5.44□□□□□ -1.54
PF4-201ENST00000296029 PSPHP1O15172 72 aa5.43□□□□□ -1.54
PF4-201ENST00000296029 KRTAP12-4P60329 112 aa5.43□□□□□ -1.54
PF4-201ENST00000296029 Q1T7F1 81 aa5.42□□□□□ -1.54
PF4-201ENST00000296029 KRTAP5-7Q6L8G8 165 aa5.42□□□□□ -1.54
PF4-201ENST00000296029 SYNE1Q8NF91 8797 aaKnown RBP5.39□□□□□ -1.55
PF4-201ENST00000296029 KRTAP15-1Q3LI76 137 aa5.38□□□□□ -1.55
PF4-201ENST00000296029 LCE3CQ5T5A8 94 aa5.33□□□□□ -1.56
PF4-201ENST00000296029 A6NED7 52 aa5.23□□□□□ -1.57
PF4-201ENST00000296029 CDC42SE1Q9NRR8 79 aa5.2□□□□□ -1.58
PF4-201ENST00000296029 MT1AP04731 61 aa5.16□□□□□ -1.58
PF4-201ENST00000296029 KRTAP6-1Q3LI64 71 aa5.14□□□□□ -1.59
PF4-201ENST00000296029 ROMO1P60602 79 aa5.13□□□□□ -1.59
PF4-201ENST00000296029 KRTAP5-2Q701N4 177 aa5.13□□□□□ -1.59
PF4-201ENST00000296029 RPS28P62857 69 aaKnown RBP5.07□□□□□ -1.6
PF4-201ENST00000296029 KRTAP9-6A8MVA2 160 aa5.06□□□□□ -1.6
PF4-201ENST00000296029 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
PF4-201ENST00000296029 KRTAP5-8O75690 187 aa4.9□□□□□ -1.63
PF4-201ENST00000296029 OBSCNQ5VST9 7968 aa4.83□□□□□ -1.64
PF4-201ENST00000296029 MUC5BQ9HC84 5762 aaPredicted RBP4.83□□□□□ -1.64
PF4-201ENST00000296029 AHNAKQ09666 5890 aaKnown RBP4.8□□□□□ -1.64
PF4-201ENST00000296029 MUC5ACP98088 5654 aa4.78□□□□□ -1.64
PF4-201ENST00000296029 PCP4P48539 62 aa4.76□□□□□ -1.65
PF4-201ENST00000296029 MT3P25713 68 aa4.71□□□□□ -1.66
PF4-201ENST00000296029 KRTAP5-1Q6L8H4 278 aa4.61□□□□□ -1.67
PF4-201ENST00000296029 LCE1EQ5T753 118 aa4.38□□□□□ -1.71
PF4-201ENST00000296029 BRK1Q8WUW1 75 aa4.32□□□□□ -1.72
PF4-201ENST00000296029 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
PF4-201ENST00000296029 LCE1CQ5T751 118 aa4.07□□□□□ -1.76
PF4-201ENST00000296029 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
PF4-201ENST00000296029 PMAIP1Q13794 54 aa4.06□□□□□ -1.76
PF4-201ENST00000296029 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
PF4-201ENST00000296029 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
PF4-201ENST00000296029 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
PF4-201ENST00000296029 PRO0628Q9UI54 55 aa3.62□□□□□ -1.83
PF4-201ENST00000296029 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
PF4-201ENST00000296029 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
PF4-201ENST00000296029 KTN1-AS1Q86SY8 53 aa3.51□□□□□ -1.85
PF4-201ENST00000296029 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
PF4-201ENST00000296029 SVIPQ8NHG7 77 aa3.5□□□□□ -1.85
PF4-201ENST00000296029 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
PF4-201ENST00000296029 LUZP6Q538Z0 58 aa3.34□□□□□ -1.87
PF4-201ENST00000296029 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
PF4-201ENST00000296029 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
PF4-201ENST00000296029 PRM1P04553 51 aa2.61□□□□□ -1.99
PF4-201ENST00000296029 NDUFAF8A1L188 74 aa2.5□□□□□ -2.01
PF4-201ENST00000296029 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
PF4-201ENST00000296029 H3BS24 57 aa2.37□□□□□ -2.03
PF4-201ENST00000296029 A0A0A0MQY5 61 aa2.28□□□□□ -2.04
PF4-201ENST00000296029 INE1O15225 51 aa2.14□□□□□ -2.07
PF4-201ENST00000296029 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 67.3 ms