RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 A0A1B0GU33 70 aa3.77□□□□□ -1.81
CCDC58-201ENST00000291458 A0A1B0GU69 56 aa3.73□□□□□ -1.81
CCDC58-201ENST00000291458 CCDC179H3BU77 68 aa3.72□□□□□ -1.81
CCDC58-201ENST00000291458 KRTAP2-1Q9BYU5 128 aa3.72□□□□□ -1.81
CCDC58-201ENST00000291458 KRTAP12-1P59990 96 aa3.71□□□□□ -1.82
CCDC58-201ENST00000291458 A8MU10 97 aa3.7□□□□□ -1.82
CCDC58-201ENST00000291458 LCE3CQ5T5A8 94 aa3.7□□□□□ -1.82
CCDC58-201ENST00000291458 SMIM26A0A096LP01 95 aa3.66□□□□□ -1.82
CCDC58-201ENST00000291458 KRTAP19-7Q3SYF9 63 aa3.66□□□□□ -1.82
CCDC58-201ENST00000291458 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
CCDC58-201ENST00000291458 MT1EP04732 61 aa3.64□□□□□ -1.83
CCDC58-201ENST00000291458 ATP5EP56381 51 aaPredicted RBP3.61□□□□□ -1.83
CCDC58-201ENST00000291458 KRTAP19-5Q3LI72 72 aa3.61□□□□□ -1.83
CCDC58-201ENST00000291458 KRTAP19-3Q7Z4W3 81 aa3.6□□□□□ -1.83
CCDC58-201ENST00000291458 PRR15LQ9BU68 103 aa3.6□□□□□ -1.83
CCDC58-201ENST00000291458 C10orf95Q9H7T3 257 aa3.55□□□□□ -1.84
CCDC58-201ENST00000291458 LCE3AQ5TA76 89 aa3.54□□□□□ -1.84
CCDC58-201ENST00000291458 LINC01558Q9Y6Z2 57 aa3.54□□□□□ -1.84
CCDC58-201ENST00000291458 TMEM258P61165 79 aa3.53□□□□□ -1.84
CCDC58-201ENST00000291458 TNP1P09430 55 aa3.52□□□□□ -1.85
CCDC58-201ENST00000291458 PP632Q6XCG6 107 aa3.48□□□□□ -1.85
CCDC58-201ENST00000291458 MT1MQ8N339 61 aa3.48□□□□□ -1.85
CCDC58-201ENST00000291458 MT1LQ93083 61 aa3.48□□□□□ -1.85
CCDC58-201ENST00000291458 MT1GP13640 62 aa3.47□□□□□ -1.85
CCDC58-201ENST00000291458 UQCR11O14957 56 aa3.46□□□□□ -1.86
CCDC58-201ENST00000291458 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
CCDC58-201ENST00000291458 KRTAP4-3Q9BYR4 195 aa3.44□□□□□ -1.86
CCDC58-201ENST00000291458 MIR22HGQ0VDD5 57 aa3.42□□□□□ -1.86
CCDC58-201ENST00000291458 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
CCDC58-201ENST00000291458 PSPHP1O15172 72 aa3.4□□□□□ -1.87
CCDC58-201ENST00000291458 MT4P47944 62 aa3.39□□□□□ -1.87
CCDC58-201ENST00000291458 KRTAP12-3P60328 96 aa3.37□□□□□ -1.87
CCDC58-201ENST00000291458 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
CCDC58-201ENST00000291458 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
CCDC58-201ENST00000291458 K7ERS5 55 aa3.35□□□□□ -1.87
CCDC58-201ENST00000291458 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
CCDC58-201ENST00000291458 KRTAP25-1Q3LHN0 102 aa3.31□□□□□ -1.88
CCDC58-201ENST00000291458 V9GYY9 64 aa3.31□□□□□ -1.88
CCDC58-201ENST00000291458 Q1T7F1 81 aa3.28□□□□□ -1.88
CCDC58-201ENST00000291458 A6NED7 52 aa3.27□□□□□ -1.89
CCDC58-201ENST00000291458 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
CCDC58-201ENST00000291458 CDC42SE1Q9NRR8 79 aa3.18□□□□□ -1.9
CCDC58-201ENST00000291458 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
CCDC58-201ENST00000291458 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
CCDC58-201ENST00000291458 ROMO1P60602 79 aa3.11□□□□□ -1.91
CCDC58-201ENST00000291458 KRTAP20-2Q3LI61 65 aa3.11□□□□□ -1.91
CCDC58-201ENST00000291458 KRTAP5-10Q6L8G5 202 aa3.09□□□□□ -1.91
CCDC58-201ENST00000291458 OBSCNQ5VST9 7968 aa3.08□□□□□ -1.92
CCDC58-201ENST00000291458 KRTAP12-4P60329 112 aa3.07□□□□□ -1.92
CCDC58-201ENST00000291458 AHNAK2Q8IVF2 5795 aa3.07□□□□□ -1.92
CCDC58-201ENST00000291458 RPS28P62857 69 aaKnown RBP3.06□□□□□ -1.92
CCDC58-201ENST00000291458 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
CCDC58-201ENST00000291458 SPRR5A0A1B0GTR4 108 aa3.03□□□□□ -1.92
CCDC58-201ENST00000291458 MT1AP04731 61 aa2.96□□□□□ -1.94
CCDC58-201ENST00000291458 KRTAP6-1Q3LI64 71 aa2.96□□□□□ -1.94
CCDC58-201ENST00000291458 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
CCDC58-201ENST00000291458 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
CCDC58-201ENST00000291458 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
CCDC58-201ENST00000291458 BRK1Q8WUW1 75 aa2.82□□□□□ -1.96
CCDC58-201ENST00000291458 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
CCDC58-201ENST00000291458 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
CCDC58-201ENST00000291458 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
CCDC58-201ENST00000291458 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
CCDC58-201ENST00000291458 PMAIP1Q13794 54 aa2.61□□□□□ -1.99
CCDC58-201ENST00000291458 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
CCDC58-201ENST00000291458 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
CCDC58-201ENST00000291458 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
CCDC58-201ENST00000291458 PRO0628Q9UI54 55 aa2.42□□□□□ -2.02
CCDC58-201ENST00000291458 KTN1-AS1Q86SY8 53 aa2.3□□□□□ -2.04
CCDC58-201ENST00000291458 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
CCDC58-201ENST00000291458 LUZP6Q538Z0 58 aa2.24□□□□□ -2.05
CCDC58-201ENST00000291458 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
CCDC58-201ENST00000291458 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
CCDC58-201ENST00000291458 PRM1P04553 51 aa1.63□□□□□ -2.15
CCDC58-201ENST00000291458 INE1O15225 51 aa1.58□□□□□ -2.16
CCDC58-201ENST00000291458 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
CCDC58-201ENST00000291458 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 160.2 ms