RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 LCE3BQ5TA77 95 aa3.69□□□□□ -1.82
HMHB1-201ENST00000289448 DSTQ03001 7570 aaKnown RBP3.68□□□□□ -1.82
HMHB1-201ENST00000289448 CAMK2N1Q7Z7J9 78 aa3.66□□□□□ -1.82
HMHB1-201ENST00000289448 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
HMHB1-201ENST00000289448 PRAC1Q96KF2 57 aa3.6□□□□□ -1.83
HMHB1-201ENST00000289448 C10orf95Q9H7T3 257 aa3.59□□□□□ -1.83
HMHB1-201ENST00000289448 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
HMHB1-201ENST00000289448 MT1EP04732 61 aa3.57□□□□□ -1.84
HMHB1-201ENST00000289448 LCE5AQ5TCM9 118 aa3.57□□□□□ -1.84
HMHB1-201ENST00000289448 KRTAP25-1Q3LHN0 102 aa3.54□□□□□ -1.84
HMHB1-201ENST00000289448 KRTAP19-3Q7Z4W3 81 aa3.54□□□□□ -1.84
HMHB1-201ENST00000289448 TNP1P09430 55 aa3.51□□□□□ -1.85
HMHB1-201ENST00000289448 KRTAP19-5Q3LI72 72 aa3.48□□□□□ -1.85
HMHB1-201ENST00000289448 KRTAP4-9Q9BYQ8 210 aa3.48□□□□□ -1.85
HMHB1-201ENST00000289448 MT1GP13640 62 aa3.44□□□□□ -1.86
HMHB1-201ENST00000289448 PP632Q6XCG6 107 aa3.44□□□□□ -1.86
HMHB1-201ENST00000289448 KRTAP23-1A1A580 65 aa3.43□□□□□ -1.86
HMHB1-201ENST00000289448 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
HMHB1-201ENST00000289448 MT1LQ93083 61 aa3.4□□□□□ -1.87
HMHB1-201ENST00000289448 MT1MQ8N339 61 aa3.39□□□□□ -1.87
HMHB1-201ENST00000289448 LCE1DQ5T752 114 aa3.38□□□□□ -1.87
HMHB1-201ENST00000289448 LCE3AQ5TA76 89 aa3.37□□□□□ -1.87
HMHB1-201ENST00000289448 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
HMHB1-201ENST00000289448 MT4P47944 62 aa3.33□□□□□ -1.88
HMHB1-201ENST00000289448 LCE4AQ5TA78 99 aa3.32□□□□□ -1.88
HMHB1-201ENST00000289448 AHNAK2Q8IVF2 5795 aa3.32□□□□□ -1.88
HMHB1-201ENST00000289448 KRTAP5-4Q6L8H1 288 aa3.29□□□□□ -1.88
HMHB1-201ENST00000289448 KRTAP4-7Q9BYR0 210 aa3.26□□□□□ -1.89
HMHB1-201ENST00000289448 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
HMHB1-201ENST00000289448 KRTAP5-10Q6L8G5 202 aa3.18□□□□□ -1.9
HMHB1-201ENST00000289448 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
HMHB1-201ENST00000289448 KRTAP9-4Q9BYQ2 154 aa3.18□□□□□ -1.9
HMHB1-201ENST00000289448 KRTAP15-1Q3LI76 137 aa3.15□□□□□ -1.91
HMHB1-201ENST00000289448 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.91
HMHB1-201ENST00000289448 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
HMHB1-201ENST00000289448 SYNE1Q8NF91 8797 aaKnown RBP3.1□□□□□ -1.91
HMHB1-201ENST00000289448 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
HMHB1-201ENST00000289448 KRTAP5-3Q6L8H2 238 aa3.08□□□□□ -1.92
HMHB1-201ENST00000289448 SPRR5A0A1B0GTR4 108 aa3.06□□□□□ -1.92
HMHB1-201ENST00000289448 KRTAP19-4Q3LI73 84 aa3.06□□□□□ -1.92
HMHB1-201ENST00000289448 KRTAP5-7Q6L8G8 165 aa3.05□□□□□ -1.92
HMHB1-201ENST00000289448 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
HMHB1-201ENST00000289448 LCE3CQ5T5A8 94 aa2.99□□□□□ -1.93
HMHB1-201ENST00000289448 LUZP6Q538Z0 58 aa2.97□□□□□ -1.93
HMHB1-201ENST00000289448 KRTAP4-2Q9BYR5 136 aa2.97□□□□□ -1.93
HMHB1-201ENST00000289448 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
HMHB1-201ENST00000289448 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
HMHB1-201ENST00000289448 MT1AP04731 61 aa2.87□□□□□ -1.95
HMHB1-201ENST00000289448 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
HMHB1-201ENST00000289448 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
HMHB1-201ENST00000289448 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
HMHB1-201ENST00000289448 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
HMHB1-201ENST00000289448 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
HMHB1-201ENST00000289448 AHNAKQ09666 5890 aaKnown RBP2.77□□□□□ -1.97
HMHB1-201ENST00000289448 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
HMHB1-201ENST00000289448 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
HMHB1-201ENST00000289448 MUC5ACP98088 5654 aa2.74□□□□□ -1.97
HMHB1-201ENST00000289448 MT3P25713 68 aa2.62□□□□□ -1.99
HMHB1-201ENST00000289448 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
HMHB1-201ENST00000289448 A0A0A0MQY5 61 aa2.59□□□□□ -1.99
HMHB1-201ENST00000289448 H3BS24 57 aa2.58□□□□□ -2
HMHB1-201ENST00000289448 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
HMHB1-201ENST00000289448 INE1O15225 51 aa2.42□□□□□ -2.02
HMHB1-201ENST00000289448 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
HMHB1-201ENST00000289448 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
HMHB1-201ENST00000289448 LCE3DQ9BYE3 92 aa2.25□□□□□ -2.05
HMHB1-201ENST00000289448 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
HMHB1-201ENST00000289448 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
HMHB1-201ENST00000289448 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
HMHB1-201ENST00000289448 LCE1FQ5T754 118 aa1.99□□□□□ -2.09
HMHB1-201ENST00000289448 PRM1P04553 51 aa1.92□□□□□ -2.1
HMHB1-201ENST00000289448 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
HMHB1-201ENST00000289448 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
HMHB1-201ENST00000289448 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
HMHB1-201ENST00000289448 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
HMHB1-201ENST00000289448 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
HMHB1-201ENST00000289448 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 40.2 ms