RNA–Protein interactions for RNA: ENST00000289416.9

ACSM3-201, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACSM3, Length 2,845 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-201ENST00000289416 KRTAP10-10P60014 251 aa1.88□□□□□ -2.11
ACSM3-201ENST00000289416 KRTAP10-12P60413 245 aa1.87□□□□□ -2.11
ACSM3-201ENST00000289416 CRIPTQ9P021 101 aa1.87□□□□□ -2.11
ACSM3-201ENST00000289416 LCE3EQ5T5B0 92 aa1.85□□□□□ -2.11
ACSM3-201ENST00000289416 SPRR2GQ9BYE4 73 aa1.83□□□□□ -2.12
ACSM3-201ENST00000289416 M0QZ58 72 aa1.82□□□□□ -2.12
ACSM3-201ENST00000289416 KRTAP19-8Q3LI54 63 aa1.8□□□□□ -2.12
ACSM3-201ENST00000289416 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
ACSM3-201ENST00000289416 SSPOA2VEC9 5147 aa1.79□□□□□ -2.12
ACSM3-201ENST00000289416 LCE1EQ5T753 118 aa1.78□□□□□ -2.12
ACSM3-201ENST00000289416 KRTAP20-1Q3LI63 56 aa1.77□□□□□ -2.13
ACSM3-201ENST00000289416 MT1BP07438 61 aa1.77□□□□□ -2.13
ACSM3-201ENST00000289416 KRTAP13-4Q3LI77 160 aa1.77□□□□□ -2.13
ACSM3-201ENST00000289416 PLAC4Q8WY50 150 aa1.76□□□□□ -2.13
ACSM3-201ENST00000289416 PRO2289Q9P1D8 64 aa1.76□□□□□ -2.13
ACSM3-201ENST00000289416 C10orf95Q9H7T3 257 aa1.75□□□□□ -2.13
ACSM3-201ENST00000289416 KRTAP19-6Q3LI70 58 aa1.74□□□□□ -2.13
ACSM3-201ENST00000289416 A0A0D9SG42 100 aa1.73□□□□□ -2.13
ACSM3-201ENST00000289416 USH2AO75445 5202 aa1.73□□□□□ -2.13
ACSM3-201ENST00000289416 KRTAP12-1P59990 96 aa1.71□□□□□ -2.14
ACSM3-201ENST00000289416 KRTAP10-5P60370 271 aa1.71□□□□□ -2.14
ACSM3-201ENST00000289416 KRTAP12-2P59991 146 aa1.69□□□□□ -2.14
ACSM3-201ENST00000289416 MT1XP80297 61 aa1.69□□□□□ -2.14
ACSM3-201ENST00000289416 LCE3DQ9BYE3 92 aa1.64□□□□□ -2.15
ACSM3-201ENST00000289416 NEBP20929 6669 aa1.64□□□□□ -2.15
ACSM3-201ENST00000289416 KRTAP6-3Q3LI67 103 aa1.63□□□□□ -2.15
ACSM3-201ENST00000289416 FSIP2Q5CZC0 6907 aa1.63□□□□□ -2.15
ACSM3-201ENST00000289416 FCGBPQ9Y6R7 5405 aaPredicted RBP1.63□□□□□ -2.15
ACSM3-201ENST00000289416 TNP1P09430 55 aa1.61□□□□□ -2.15
ACSM3-201ENST00000289416 KRTAP2-3P0C7H8 128 aa1.6□□□□□ -2.15
ACSM3-201ENST00000289416 KRTAP2-4Q9BYR9 128 aa1.6□□□□□ -2.15
ACSM3-201ENST00000289416 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.16
ACSM3-201ENST00000289416 SPRR5A0A1B0GTR4 108 aa1.58□□□□□ -2.16
ACSM3-201ENST00000289416 KRTAP8-1Q8IUC2 63 aa1.57□□□□□ -2.16
ACSM3-201ENST00000289416 INE1O15225 51 aa1.54□□□□□ -2.16
ACSM3-201ENST00000289416 LCE3AQ5TA76 89 aa1.53□□□□□ -2.16
ACSM3-201ENST00000289416 PP632Q6XCG6 107 aa1.53□□□□□ -2.16
ACSM3-201ENST00000289416 SPRR2FQ96RM1 72 aa1.52□□□□□ -2.17
ACSM3-201ENST00000289416 MACF1Q9UPN3 7388 aaKnown RBP1.51□□□□□ -2.17
ACSM3-201ENST00000289416 KRTAP19-7Q3SYF9 63 aa1.5□□□□□ -2.17
ACSM3-201ENST00000289416 KRTAP19-5Q3LI72 72 aa1.5□□□□□ -2.17
ACSM3-201ENST00000289416 MT1EP04732 61 aa1.49□□□□□ -2.17
ACSM3-201ENST00000289416 KRTAP2-1Q9BYU5 128 aa1.49□□□□□ -2.17
ACSM3-201ENST00000289416 KRTAP12-3P60328 96 aa1.48□□□□□ -2.17
ACSM3-201ENST00000289416 KMT2DO14686 5537 aa1.47□□□□□ -2.17
ACSM3-201ENST00000289416 SPRR2EP22531 72 aa1.47□□□□□ -2.17
ACSM3-201ENST00000289416 SPRR2BP35325 72 aa1.47□□□□□ -2.17
ACSM3-201ENST00000289416 SPRR2AP35326 72 aa1.47□□□□□ -2.17
ACSM3-201ENST00000289416 AHNAK2Q8IVF2 5795 aa1.47□□□□□ -2.17
ACSM3-201ENST00000289416 KRTAP19-3Q7Z4W3 81 aa1.46□□□□□ -2.18
ACSM3-201ENST00000289416 MT1LQ93083 61 aa1.45□□□□□ -2.18
ACSM3-201ENST00000289416 SYNE2Q8WXH0 6885 aaKnown RBP1.44□□□□□ -2.18
ACSM3-201ENST00000289416 MT1GP13640 62 aa1.44□□□□□ -2.18
ACSM3-201ENST00000289416 KRTAP9-6A8MVA2 160 aa1.44□□□□□ -2.18
ACSM3-201ENST00000289416 SPRR2DP22532 72 aa1.42□□□□□ -2.18
ACSM3-201ENST00000289416 KRTAP5-10Q6L8G5 202 aa1.42□□□□□ -2.18
ACSM3-201ENST00000289416 MUC12Q9UKN1 5478 aa1.41□□□□□ -2.18
ACSM3-201ENST00000289416 MT1MQ8N339 61 aa1.41□□□□□ -2.18
ACSM3-201ENST00000289416 OBSCNQ5VST9 7968 aa1.41□□□□□ -2.18
ACSM3-201ENST00000289416 MDN1Q9NU22 5596 aa1.38□□□□□ -2.19
ACSM3-201ENST00000289416 MUC5ACP98088 5654 aa1.29□□□□□ -2.2
ACSM3-201ENST00000289416 DSTQ03001 7570 aaKnown RBP1.28□□□□□ -2.2
ACSM3-201ENST00000289416 KRTAP12-4P60329 112 aa1.26□□□□□ -2.21
ACSM3-201ENST00000289416 MT1AP04731 61 aa1.25□□□□□ -2.21
ACSM3-201ENST00000289416 MT4P47944 62 aa1.21□□□□□ -2.22
ACSM3-201ENST00000289416 KRTAP6-1Q3LI64 71 aa1.21□□□□□ -2.22
ACSM3-201ENST00000289416 SYNE1Q8NF91 8797 aaKnown RBP1.19□□□□□ -2.22
ACSM3-201ENST00000289416 KRTAP20-2Q3LI61 65 aa1.19□□□□□ -2.22
ACSM3-201ENST00000289416 KRTAP6-2Q3LI66 62 aa1.13□□□□□ -2.23
ACSM3-201ENST00000289416 LCE1CQ5T751 118 aa1.11□□□□□ -2.23
ACSM3-201ENST00000289416 LCE1BQ5T7P3 118 aa1.11□□□□□ -2.23
ACSM3-201ENST00000289416 MUC19Q7Z5P9 8384 aa1.08□□□□□ -2.24
ACSM3-201ENST00000289416 PRM1P04553 51 aa0.99□□□□□ -2.25
ACSM3-201ENST00000289416 KRTAP21-2Q3LI59 83 aa0.79□□□□□ -2.28
ACSM3-201ENST00000289416 PHGR1C9JFL3 82 aa0.79□□□□□ -2.28
ACSM3-201ENST00000289416 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.29
ACSM3-201ENST00000289416 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 60.8 ms