RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 KRTAP4-7Q9BYR0 210 aa6.58□□□□□ -1.36
ATG3-201ENST00000283290 TNP1P09430 55 aa6.57□□□□□ -1.36
ATG3-201ENST00000283290 KRTAP20-1Q3LI63 56 aa6.57□□□□□ -1.36
ATG3-201ENST00000283290 KRTAP19-7Q3SYF9 63 aa6.53□□□□□ -1.36
ATG3-201ENST00000283290 LCE3AQ5TA76 89 aa6.52□□□□□ -1.36
ATG3-201ENST00000283290 KRTAP25-1Q3LHN0 102 aa6.5□□□□□ -1.37
ATG3-201ENST00000283290 PRAC1Q96KF2 57 aa6.49□□□□□ -1.37
ATG3-201ENST00000283290 KRTAP19-5Q3LI72 72 aa6.48□□□□□ -1.37
ATG3-201ENST00000283290 SPRR2DP22532 72 aa6.45□□□□□ -1.38
ATG3-201ENST00000283290 KRTAP2-3P0C7H8 128 aa6.44□□□□□ -1.38
ATG3-201ENST00000283290 LCE1DQ5T752 114 aa6.44□□□□□ -1.38
ATG3-201ENST00000283290 KRTAP2-4Q9BYR9 128 aa6.44□□□□□ -1.38
ATG3-201ENST00000283290 MT1EP04732 61 aa6.44□□□□□ -1.38
ATG3-201ENST00000283290 KRTAP4-9Q9BYQ8 210 aa6.34□□□□□ -1.39
ATG3-201ENST00000283290 KRTAP4-2Q9BYR5 136 aa6.34□□□□□ -1.39
ATG3-201ENST00000283290 KRTAP19-3Q7Z4W3 81 aa6.3□□□□□ -1.4
ATG3-201ENST00000283290 KRTAP23-1A1A580 65 aa6.29□□□□□ -1.4
ATG3-201ENST00000283290 LCE5AQ5TCM9 118 aa6.28□□□□□ -1.4
ATG3-201ENST00000283290 PP632Q6XCG6 107 aa6.27□□□□□ -1.41
ATG3-201ENST00000283290 KRTAP2-2Q9BYT5 123 aa6.25□□□□□ -1.41
ATG3-201ENST00000283290 KRTAP2-1Q9BYU5 128 aa6.25□□□□□ -1.41
ATG3-201ENST00000283290 KRTAP12-3P60328 96 aa6.22□□□□□ -1.41
ATG3-201ENST00000283290 MT1LQ93083 61 aa6.22□□□□□ -1.41
ATG3-201ENST00000283290 MT1GP13640 62 aa6.15□□□□□ -1.42
ATG3-201ENST00000283290 DSTQ03001 7570 aaKnown RBP6.13□□□□□ -1.43
ATG3-201ENST00000283290 MT1MQ8N339 61 aa6.11□□□□□ -1.43
ATG3-201ENST00000283290 KRTAP4-3Q9BYR4 195 aa6.08□□□□□ -1.44
ATG3-201ENST00000283290 KRTAP4-11Q9BYQ6 195 aa6.04□□□□□ -1.44
ATG3-201ENST00000283290 KRTAP5-3Q6L8H2 238 aa5.97□□□□□ -1.45
ATG3-201ENST00000283290 KRTAP15-1Q3LI76 137 aa5.92□□□□□ -1.46
ATG3-201ENST00000283290 LCE4AQ5TA78 99 aa5.79□□□□□ -1.48
ATG3-201ENST00000283290 LCE3CQ5T5A8 94 aa5.76□□□□□ -1.49
ATG3-201ENST00000283290 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
ATG3-201ENST00000283290 KRTAP5-4Q6L8H1 288 aa5.65□□□□□ -1.5
ATG3-201ENST00000283290 MT4P47944 62 aa5.63□□□□□ -1.51
ATG3-201ENST00000283290 HMCN1Q96RW7 5635 aa5.62□□□□□ -1.51
ATG3-201ENST00000283290 KRTAP5-5Q701N2 237 aaPredicted RBP5.55□□□□□ -1.52
ATG3-201ENST00000283290 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
ATG3-201ENST00000283290 KRTAP9-6A8MVA2 160 aa5.51□□□□□ -1.53
ATG3-201ENST00000283290 GPR98Q8WXG9 6306 aa5.42□□□□□ -1.54
ATG3-201ENST00000283290 SYNE1Q8NF91 8797 aaKnown RBP5.34□□□□□ -1.55
ATG3-201ENST00000283290 AHNAK2Q8IVF2 5795 aa5.34□□□□□ -1.55
ATG3-201ENST00000283290 KRTAP20-2Q3LI61 65 aa5.33□□□□□ -1.56
ATG3-201ENST00000283290 KRTAP12-4P60329 112 aa5.32□□□□□ -1.56
ATG3-201ENST00000283290 KRTAP6-1Q3LI64 71 aa5.29□□□□□ -1.56
ATG3-201ENST00000283290 LUZP6Q538Z0 58 aa5.29□□□□□ -1.56
ATG3-201ENST00000283290 MT1AP04731 61 aa5.26□□□□□ -1.57
ATG3-201ENST00000283290 KRTAP5-10Q6L8G5 202 aa5.13□□□□□ -1.59
ATG3-201ENST00000283290 NDUFAF8A1L188 74 aa5.12□□□□□ -1.59
ATG3-201ENST00000283290 KRTAP5-2Q701N4 177 aa4.99□□□□□ -1.61
ATG3-201ENST00000283290 KRTAP6-2Q3LI66 62 aa4.97□□□□□ -1.61
ATG3-201ENST00000283290 KRTAP5-7Q6L8G8 165 aa4.88□□□□□ -1.63
ATG3-201ENST00000283290 H3BS24 57 aa4.78□□□□□ -1.64
ATG3-201ENST00000283290 MT3P25713 68 aa4.77□□□□□ -1.65
ATG3-201ENST00000283290 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
ATG3-201ENST00000283290 KRTAP5-8O75690 187 aa4.64□□□□□ -1.67
ATG3-201ENST00000283290 A0A0A0MQY5 61 aa4.61□□□□□ -1.67
ATG3-201ENST00000283290 KRTAP5-1Q6L8H4 278 aa4.44□□□□□ -1.7
ATG3-201ENST00000283290 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
ATG3-201ENST00000283290 MUC5ACP98088 5654 aa4.39□□□□□ -1.71
ATG3-201ENST00000283290 MUC5BQ9HC84 5762 aaPredicted RBP4.36□□□□□ -1.71
ATG3-201ENST00000283290 INE1O15225 51 aa4.33□□□□□ -1.72
ATG3-201ENST00000283290 AHNAKQ09666 5890 aaKnown RBP4.31□□□□□ -1.72
ATG3-201ENST00000283290 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
ATG3-201ENST00000283290 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.74
ATG3-201ENST00000283290 LCE1BQ5T7P3 118 aa4.12□□□□□ -1.75
ATG3-201ENST00000283290 KRTAP5-11Q6L8G4 156 aa4.1□□□□□ -1.75
ATG3-201ENST00000283290 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
ATG3-201ENST00000283290 LCE1CQ5T751 118 aa4.01□□□□□ -1.77
ATG3-201ENST00000283290 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
ATG3-201ENST00000283290 PRM1P04553 51 aa3.51□□□□□ -1.85
ATG3-201ENST00000283290 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
ATG3-201ENST00000283290 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
ATG3-201ENST00000283290 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
ATG3-201ENST00000283290 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
ATG3-201ENST00000283290 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
ATG3-201ENST00000283290 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 119.3 ms