RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 SVIPQ8NHG7 77 aa4.37□□□□□ -1.71
XRCC4-201ENST00000282268 KMT2DO14686 5537 aa4.37□□□□□ -1.71
XRCC4-201ENST00000282268 PP632Q6XCG6 107 aa4.34□□□□□ -1.71
XRCC4-201ENST00000282268 KRTAP8-1Q8IUC2 63 aa4.32□□□□□ -1.72
XRCC4-201ENST00000282268 KRTAP19-5Q3LI72 72 aa4.29□□□□□ -1.72
XRCC4-201ENST00000282268 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
XRCC4-201ENST00000282268 MACF1Q9UPN3 7388 aaKnown RBP4.23□□□□□ -1.73
XRCC4-201ENST00000282268 KRTAP19-7Q3SYF9 63 aa4.21□□□□□ -1.74
XRCC4-201ENST00000282268 SPRR2FQ96RM1 72 aa4.19□□□□□ -1.74
XRCC4-201ENST00000282268 SYNE2Q8WXH0 6885 aaKnown RBP4.15□□□□□ -1.74
XRCC4-201ENST00000282268 MT1EP04732 61 aa4.15□□□□□ -1.75
XRCC4-201ENST00000282268 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
XRCC4-201ENST00000282268 KRTAP6-3Q3LI67 103 aa4.09□□□□□ -1.76
XRCC4-201ENST00000282268 KRTAP5-9P26371 169 aa4.07□□□□□ -1.76
XRCC4-201ENST00000282268 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
XRCC4-201ENST00000282268 MT1LQ93083 61 aa4.06□□□□□ -1.76
XRCC4-201ENST00000282268 SPRR2EP22531 72 aa4□□□□□ -1.77
XRCC4-201ENST00000282268 SPRR2BP35325 72 aa4□□□□□ -1.77
XRCC4-201ENST00000282268 SPRR2AP35326 72 aa4□□□□□ -1.77
XRCC4-201ENST00000282268 KRTAP19-3Q7Z4W3 81 aa4□□□□□ -1.77
XRCC4-201ENST00000282268 LCE1AQ5T7P2 110 aa3.97□□□□□ -1.77
XRCC4-201ENST00000282268 MDN1Q9NU22 5596 aa3.96□□□□□ -1.78
XRCC4-201ENST00000282268 LCE3CQ5T5A8 94 aa3.95□□□□□ -1.78
XRCC4-201ENST00000282268 MT1GP13640 62 aa3.94□□□□□ -1.78
XRCC4-201ENST00000282268 MT1MQ8N339 61 aa3.92□□□□□ -1.78
XRCC4-201ENST00000282268 KRTAP4-3Q9BYR4 195 aa3.9□□□□□ -1.78
XRCC4-201ENST00000282268 SPRR2DP22532 72 aa3.85□□□□□ -1.79
XRCC4-201ENST00000282268 SPRR5A0A1B0GTR4 108 aa3.78□□□□□ -1.8
XRCC4-201ENST00000282268 NEBP20929 6669 aa3.77□□□□□ -1.81
XRCC4-201ENST00000282268 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
XRCC4-201ENST00000282268 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.69□□□□□ -1.82
XRCC4-201ENST00000282268 LUZP6Q538Z0 58 aa3.68□□□□□ -1.82
XRCC4-201ENST00000282268 DSTQ03001 7570 aaKnown RBP3.67□□□□□ -1.82
XRCC4-201ENST00000282268 A0A0A0MQY5 61 aa3.65□□□□□ -1.83
XRCC4-201ENST00000282268 KRTAP2-3P0C7H8 128 aa3.6□□□□□ -1.83
XRCC4-201ENST00000282268 KRTAP2-4Q9BYR9 128 aa3.6□□□□□ -1.83
XRCC4-201ENST00000282268 KRTAP20-1Q3LI63 56 aa3.59□□□□□ -1.83
XRCC4-201ENST00000282268 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
XRCC4-201ENST00000282268 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
XRCC4-201ENST00000282268 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
XRCC4-201ENST00000282268 KRTAP5-5Q701N2 237 aaPredicted RBP3.5□□□□□ -1.85
XRCC4-201ENST00000282268 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
XRCC4-201ENST00000282268 MT1AP04731 61 aa3.43□□□□□ -1.86
XRCC4-201ENST00000282268 MT4P47944 62 aa3.38□□□□□ -1.87
XRCC4-201ENST00000282268 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
XRCC4-201ENST00000282268 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
XRCC4-201ENST00000282268 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
XRCC4-201ENST00000282268 SYNE1Q8NF91 8797 aaKnown RBP3.24□□□□□ -1.89
XRCC4-201ENST00000282268 MT3P25713 68 aa3.2□□□□□ -1.9
XRCC4-201ENST00000282268 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
XRCC4-201ENST00000282268 HMCN1Q96RW7 5635 aa3.2□□□□□ -1.9
XRCC4-201ENST00000282268 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
XRCC4-201ENST00000282268 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
XRCC4-201ENST00000282268 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
XRCC4-201ENST00000282268 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
XRCC4-201ENST00000282268 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
XRCC4-201ENST00000282268 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
XRCC4-201ENST00000282268 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
XRCC4-201ENST00000282268 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
XRCC4-201ENST00000282268 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
XRCC4-201ENST00000282268 INE1O15225 51 aa2.85□□□□□ -1.95
XRCC4-201ENST00000282268 OBSCNQ5VST9 7968 aa2.79□□□□□ -1.96
XRCC4-201ENST00000282268 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
XRCC4-201ENST00000282268 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
XRCC4-201ENST00000282268 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
XRCC4-201ENST00000282268 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
XRCC4-201ENST00000282268 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
XRCC4-201ENST00000282268 MUC5ACP98088 5654 aa2.55□□□□□ -2
XRCC4-201ENST00000282268 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
XRCC4-201ENST00000282268 PRM1P04553 51 aa2.47□□□□□ -2.01
XRCC4-201ENST00000282268 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
XRCC4-201ENST00000282268 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
XRCC4-201ENST00000282268 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
XRCC4-201ENST00000282268 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
XRCC4-201ENST00000282268 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
XRCC4-201ENST00000282268 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
XRCC4-201ENST00000282268 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 118.9 ms