RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 KMT2DO14686 5537 aa8.97□□□□□ -0.97
ROM1-201ENST00000278833 INE1O15225 51 aa8.95□□□□□ -0.98
ROM1-201ENST00000278833 KRTAP6-3Q3LI67 103 aa8.89□□□□□ -0.99
ROM1-201ENST00000278833 MT1EP04732 61 aa8.78□□□□□ -1
ROM1-201ENST00000278833 MT1LQ93083 61 aa8.74□□□□□ -1.01
ROM1-201ENST00000278833 KRTAP9-6A8MVA2 160 aa8.74□□□□□ -1.01
ROM1-201ENST00000278833 KRTAP5-9P26371 169 aa8.71□□□□□ -1.01
ROM1-201ENST00000278833 MUC12Q9UKN1 5478 aa8.68□□□□□ -1.02
ROM1-201ENST00000278833 SPRR2FQ96RM1 72 aa8.58□□□□□ -1.04
ROM1-201ENST00000278833 KRTAP2-3P0C7H8 128 aa8.55□□□□□ -1.04
ROM1-201ENST00000278833 KRTAP4-7Q9BYR0 210 aa8.55□□□□□ -1.04
ROM1-201ENST00000278833 KRTAP2-4Q9BYR9 128 aa8.55□□□□□ -1.04
ROM1-201ENST00000278833 KRTAP2-1Q9BYU5 128 aa8.55□□□□□ -1.04
ROM1-201ENST00000278833 MDN1Q9NU22 5596 aa8.52□□□□□ -1.04
ROM1-201ENST00000278833 NEBP20929 6669 aa8.46□□□□□ -1.05
ROM1-201ENST00000278833 SPRR2EP22531 72 aa8.32□□□□□ -1.08
ROM1-201ENST00000278833 SPRR2BP35325 72 aa8.32□□□□□ -1.08
ROM1-201ENST00000278833 SPRR2AP35326 72 aa8.32□□□□□ -1.08
ROM1-201ENST00000278833 LCE1AQ5T7P2 110 aa8.3□□□□□ -1.08
ROM1-201ENST00000278833 KRTAP19-3Q7Z4W3 81 aa8.23□□□□□ -1.09
ROM1-201ENST00000278833 MT1GP13640 62 aa8.23□□□□□ -1.09
ROM1-201ENST00000278833 MT1MQ8N339 61 aa8.2□□□□□ -1.1
ROM1-201ENST00000278833 KRTAP4-3Q9BYR4 195 aa8.05□□□□□ -1.12
ROM1-201ENST00000278833 SPRR2DP22532 72 aa8.02□□□□□ -1.12
ROM1-201ENST00000278833 LCE5AQ5TCM9 118 aa7.99□□□□□ -1.13
ROM1-201ENST00000278833 LOC100996750A0A140TA64 210 aa7.98□□□□□ -1.13
ROM1-201ENST00000278833 KRTAP20-1Q3LI63 56 aa7.98□□□□□ -1.13
ROM1-201ENST00000278833 DSTQ03001 7570 aaKnown RBP7.83□□□□□ -1.16
ROM1-201ENST00000278833 LCE3BQ5TA77 95 aa7.78□□□□□ -1.16
ROM1-201ENST00000278833 KRTAP2-2Q9BYT5 123 aa7.7□□□□□ -1.18
ROM1-201ENST00000278833 MT1AP04731 61 aa7.43□□□□□ -1.22
ROM1-201ENST00000278833 KRTAP12-4P60329 112 aa7.36□□□□□ -1.23
ROM1-201ENST00000278833 KRTAP5-5Q701N2 237 aaPredicted RBP7.35□□□□□ -1.23
ROM1-201ENST00000278833 KRTAP6-1Q3LI64 71 aa7.34□□□□□ -1.23
ROM1-201ENST00000278833 KRTAP4-9Q9BYQ8 210 aa7.14□□□□□ -1.27
ROM1-201ENST00000278833 LCE4AQ5TA78 99 aa7.11□□□□□ -1.27
ROM1-201ENST00000278833 KRTAP5-4Q6L8H1 288 aa7.11□□□□□ -1.27
ROM1-201ENST00000278833 LCE1DQ5T752 114 aa7.02□□□□□ -1.29
ROM1-201ENST00000278833 MT4P47944 62 aa7.01□□□□□ -1.29
ROM1-201ENST00000278833 LCE3DQ9BYE3 92 aa7.01□□□□□ -1.29
ROM1-201ENST00000278833 KRTAP9-4Q9BYQ2 154 aa6.96□□□□□ -1.29
ROM1-201ENST00000278833 LCE3EQ5T5B0 92 aa6.94□□□□□ -1.3
ROM1-201ENST00000278833 HMCN1Q96RW7 5635 aa6.92□□□□□ -1.3
ROM1-201ENST00000278833 SYNE1Q8NF91 8797 aaKnown RBP6.9□□□□□ -1.3
ROM1-201ENST00000278833 KRTAP4-6Q9BYQ5 205 aa6.89□□□□□ -1.31
ROM1-201ENST00000278833 KRTAP20-2Q3LI61 65 aa6.68□□□□□ -1.34
ROM1-201ENST00000278833 MT3P25713 68 aa6.65□□□□□ -1.34
ROM1-201ENST00000278833 KRTAP6-2Q3LI66 62 aa6.58□□□□□ -1.36
ROM1-201ENST00000278833 PRM1P04553 51 aa6.49□□□□□ -1.37
ROM1-201ENST00000278833 KRTAP5-3Q6L8H2 238 aa6.47□□□□□ -1.37
ROM1-201ENST00000278833 AHNAK2Q8IVF2 5795 aa6.43□□□□□ -1.38
ROM1-201ENST00000278833 GPR98Q8WXG9 6306 aa6.38□□□□□ -1.39
ROM1-201ENST00000278833 KRTAP5-2Q701N4 177 aa6.31□□□□□ -1.4
ROM1-201ENST00000278833 KRTAP5-10Q6L8G5 202 aa6.24□□□□□ -1.41
ROM1-201ENST00000278833 OBSCNQ5VST9 7968 aa6.06□□□□□ -1.44
ROM1-201ENST00000278833 KRTAP4-11Q9BYQ6 195 aa5.97□□□□□ -1.45
ROM1-201ENST00000278833 KRTAP5-7Q6L8G8 165 aa5.91□□□□□ -1.46
ROM1-201ENST00000278833 KRTAP5-8O75690 187 aa5.77□□□□□ -1.49
ROM1-201ENST00000278833 LCE1EQ5T753 118 aa5.58□□□□□ -1.52
ROM1-201ENST00000278833 KRTAP5-1Q6L8H4 278 aa5.58□□□□□ -1.52
ROM1-201ENST00000278833 MUC5ACP98088 5654 aa5.43□□□□□ -1.54
ROM1-201ENST00000278833 KRTAP9-9Q9BYP9 154 aa5.34□□□□□ -1.55
ROM1-201ENST00000278833 MUC5BQ9HC84 5762 aaPredicted RBP5.25□□□□□ -1.57
ROM1-201ENST00000278833 LCE1CQ5T751 118 aa5.22□□□□□ -1.57
ROM1-201ENST00000278833 LCE1BQ5T7P3 118 aa5.22□□□□□ -1.57
ROM1-201ENST00000278833 KRTAP4-2Q9BYR5 136 aa5.19□□□□□ -1.58
ROM1-201ENST00000278833 AHNAKQ09666 5890 aaKnown RBP5.08□□□□□ -1.6
ROM1-201ENST00000278833 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.02□□□□□ -1.61
ROM1-201ENST00000278833 KRTAP21-2Q3LI59 83 aa4.81□□□□□ -1.64
ROM1-201ENST00000278833 KRTAP5-11Q6L8G4 156 aa4.58□□□□□ -1.68
ROM1-201ENST00000278833 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.68
ROM1-201ENST00000278833 LCE1FQ5T754 118 aa4.32□□□□□ -1.72
ROM1-201ENST00000278833 KRTAP21-1Q3LI58 79 aa4.2□□□□□ -1.74
ROM1-201ENST00000278833 KRTAP4-4Q9BYR3 166 aa4.13□□□□□ -1.75
ROM1-201ENST00000278833 PHGR1C9JFL3 82 aa3.95□□□□□ -1.78
ROM1-201ENST00000278833 MUC19Q7Z5P9 8384 aa3.68□□□□□ -1.82
ROM1-201ENST00000278833 MUC16Q8WXI7 14507 aa2.62□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 6.3 ms