RNA–Protein interactions for RNA: ENST00000278572.10

RPS3-201, Transcript of ribosomal protein S3, humanhuman

TSL 3 BASIC

Gene RPS3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-201ENST00000278572 Q1T7F1 81 aa5.31□□□□□ -1.56
RPS3-201ENST00000278572 HMCN1Q96RW7 5635 aa5.29□□□□□ -1.56
RPS3-201ENST00000278572 MIR22HGQ0VDD5 57 aa5.28□□□□□ -1.56
RPS3-201ENST00000278572 V9GYY9 64 aa5.28□□□□□ -1.56
RPS3-201ENST00000278572 MT1MQ8N339 61 aa5.27□□□□□ -1.57
RPS3-201ENST00000278572 MT1LQ93083 61 aa5.26□□□□□ -1.57
RPS3-201ENST00000278572 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
RPS3-201ENST00000278572 LCE4AQ5TA78 99 aa5.24□□□□□ -1.57
RPS3-201ENST00000278572 TNP1P09430 55 aa5.23□□□□□ -1.57
RPS3-201ENST00000278572 A0A0A0MQY5 61 aa5.22□□□□□ -1.57
RPS3-201ENST00000278572 LCE3AQ5TA76 89 aa5.21□□□□□ -1.58
RPS3-201ENST00000278572 MT4P47944 62 aa5.18□□□□□ -1.58
RPS3-201ENST00000278572 RPS28P62857 69 aaKnown RBP5.16□□□□□ -1.58
RPS3-201ENST00000278572 A6NED7 52 aa5.13□□□□□ -1.59
RPS3-201ENST00000278572 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
RPS3-201ENST00000278572 AHNAK2Q8IVF2 5795 aa5.11□□□□□ -1.59
RPS3-201ENST00000278572 KRTAP5-4Q6L8H1 288 aa5.09□□□□□ -1.59
RPS3-201ENST00000278572 K7ERS5 55 aa5.08□□□□□ -1.6
RPS3-201ENST00000278572 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
RPS3-201ENST00000278572 KRTAP12-3P60328 96 aa5.03□□□□□ -1.6
RPS3-201ENST00000278572 KRTAP25-1Q3LHN0 102 aa4.99□□□□□ -1.61
RPS3-201ENST00000278572 KRTAP4-6Q9BYQ5 205 aa4.99□□□□□ -1.61
RPS3-201ENST00000278572 KRTAP4-7Q9BYR0 210 aa4.95□□□□□ -1.62
RPS3-201ENST00000278572 KRTAP5-10Q6L8G5 202 aa4.93□□□□□ -1.62
RPS3-201ENST00000278572 CDC42SE1Q9NRR8 79 aa4.91□□□□□ -1.62
RPS3-201ENST00000278572 KRTAP5-5Q701N2 237 aaPredicted RBP4.84□□□□□ -1.63
RPS3-201ENST00000278572 ROMO1P60602 79 aa4.83□□□□□ -1.64
RPS3-201ENST00000278572 KRTAP20-2Q3LI61 65 aa4.82□□□□□ -1.64
RPS3-201ENST00000278572 SPRR5A0A1B0GTR4 108 aa4.8□□□□□ -1.64
RPS3-201ENST00000278572 KRTAP5-3Q6L8H2 238 aa4.8□□□□□ -1.64
RPS3-201ENST00000278572 KRTAP12-4P60329 112 aa4.78□□□□□ -1.64
RPS3-201ENST00000278572 KRTAP5-7Q6L8G8 165 aa4.77□□□□□ -1.65
RPS3-201ENST00000278572 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
RPS3-201ENST00000278572 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
RPS3-201ENST00000278572 LOC100996750A0A140TA64 210 aa4.7□□□□□ -1.66
RPS3-201ENST00000278572 KRTAP15-1Q3LI76 137 aa4.69□□□□□ -1.66
RPS3-201ENST00000278572 BRK1Q8WUW1 75 aa4.61□□□□□ -1.67
RPS3-201ENST00000278572 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
RPS3-201ENST00000278572 PRO0628Q9UI54 55 aa4.59□□□□□ -1.67
RPS3-201ENST00000278572 MT1AP04731 61 aa4.48□□□□□ -1.69
RPS3-201ENST00000278572 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
RPS3-201ENST00000278572 KRTAP6-1Q3LI64 71 aa4.43□□□□□ -1.7
RPS3-201ENST00000278572 KRTAP4-11Q9BYQ6 195 aa4.43□□□□□ -1.7
RPS3-201ENST00000278572 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
RPS3-201ENST00000278572 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
RPS3-201ENST00000278572 KRTAP9-4Q9BYQ2 154 aa4.32□□□□□ -1.72
RPS3-201ENST00000278572 PMAIP1Q13794 54 aa4.31□□□□□ -1.72
RPS3-201ENST00000278572 MUC5BQ9HC84 5762 aaPredicted RBP4.31□□□□□ -1.72
RPS3-201ENST00000278572 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
RPS3-201ENST00000278572 AHNAKQ09666 5890 aaKnown RBP4.3□□□□□ -1.72
RPS3-201ENST00000278572 KRTAP5-8O75690 187 aa4.27□□□□□ -1.73
RPS3-201ENST00000278572 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
RPS3-201ENST00000278572 KRTAP4-12Q9BQ66 201 aa4.26□□□□□ -1.73
RPS3-201ENST00000278572 MUC5ACP98088 5654 aa4.24□□□□□ -1.73
RPS3-201ENST00000278572 KTN1-AS1Q86SY8 53 aa4.17□□□□□ -1.74
RPS3-201ENST00000278572 MT3P25713 68 aa4.12□□□□□ -1.75
RPS3-201ENST00000278572 KRTAP9-9Q9BYP9 154 aa4.1□□□□□ -1.75
RPS3-201ENST00000278572 KRTAP5-1Q6L8H4 278 aa4□□□□□ -1.77
RPS3-201ENST00000278572 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
RPS3-201ENST00000278572 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
RPS3-201ENST00000278572 LCE1BQ5T7P3 118 aa3.58□□□□□ -1.84
RPS3-201ENST00000278572 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
RPS3-201ENST00000278572 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
RPS3-201ENST00000278572 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
RPS3-201ENST00000278572 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
RPS3-201ENST00000278572 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
RPS3-201ENST00000278572 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
RPS3-201ENST00000278572 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
RPS3-201ENST00000278572 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
RPS3-201ENST00000278572 KRTAP21-2Q3LI59 83 aa2.92□□□□□ -1.94
RPS3-201ENST00000278572 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
RPS3-201ENST00000278572 INE1O15225 51 aa2.89□□□□□ -1.95
RPS3-201ENST00000278572 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
RPS3-201ENST00000278572 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
RPS3-201ENST00000278572 PRM1P04553 51 aa2.52□□□□□ -2.01
RPS3-201ENST00000278572 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
RPS3-201ENST00000278572 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 13.3 ms