RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 MT1EP04732 61 aa4.25□□□□□ -1.73
SSRP1-201ENST00000278412 KRTAP4-7Q9BYR0 210 aa4.23□□□□□ -1.73
SSRP1-201ENST00000278412 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
SSRP1-201ENST00000278412 SPRR2FQ96RM1 72 aa4.22□□□□□ -1.73
SSRP1-201ENST00000278412 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.17□□□□□ -1.74
SSRP1-201ENST00000278412 MT1LQ93083 61 aa4.16□□□□□ -1.74
SSRP1-201ENST00000278412 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
SSRP1-201ENST00000278412 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
SSRP1-201ENST00000278412 KRTAP5-9P26371 169 aa4.06□□□□□ -1.76
SSRP1-201ENST00000278412 KRTAP19-3Q7Z4W3 81 aa4.05□□□□□ -1.76
SSRP1-201ENST00000278412 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
SSRP1-201ENST00000278412 LCE1AQ5T7P2 110 aa4.01□□□□□ -1.77
SSRP1-201ENST00000278412 MT1MQ8N339 61 aa4□□□□□ -1.77
SSRP1-201ENST00000278412 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
SSRP1-201ENST00000278412 LOC100996750A0A140TA64 210 aa3.97□□□□□ -1.77
SSRP1-201ENST00000278412 SPRR2EP22531 72 aa3.97□□□□□ -1.77
SSRP1-201ENST00000278412 SPRR2BP35325 72 aa3.97□□□□□ -1.77
SSRP1-201ENST00000278412 SPRR2AP35326 72 aa3.97□□□□□ -1.77
SSRP1-201ENST00000278412 KRTAP6-3Q3LI67 103 aa3.96□□□□□ -1.78
SSRP1-201ENST00000278412 MT1GP13640 62 aa3.95□□□□□ -1.78
SSRP1-201ENST00000278412 KRTAP9-7A8MTY7 169 aa3.94□□□□□ -1.78
SSRP1-201ENST00000278412 NEBP20929 6669 aa3.92□□□□□ -1.78
SSRP1-201ENST00000278412 SPRR2DP22532 72 aa3.8□□□□□ -1.8
SSRP1-201ENST00000278412 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
SSRP1-201ENST00000278412 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
SSRP1-201ENST00000278412 KRTAP2-3P0C7H8 128 aa3.69□□□□□ -1.82
SSRP1-201ENST00000278412 KRTAP2-4Q9BYR9 128 aa3.69□□□□□ -1.82
SSRP1-201ENST00000278412 KRTAP2-1Q9BYU5 128 aa3.69□□□□□ -1.82
SSRP1-201ENST00000278412 OBSCNQ5VST9 7968 aa3.68□□□□□ -1.82
SSRP1-201ENST00000278412 LCE3BQ5TA77 95 aa3.66□□□□□ -1.82
SSRP1-201ENST00000278412 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.84
SSRP1-201ENST00000278412 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
SSRP1-201ENST00000278412 MT1AP04731 61 aa3.47□□□□□ -1.85
SSRP1-201ENST00000278412 KRTAP20-1Q3LI63 56 aa3.43□□□□□ -1.86
SSRP1-201ENST00000278412 KRTAP4-9Q9BYQ8 210 aa3.43□□□□□ -1.86
SSRP1-201ENST00000278412 MT4P47944 62 aa3.42□□□□□ -1.86
SSRP1-201ENST00000278412 KRTAP4-6Q9BYQ5 205 aa3.4□□□□□ -1.86
SSRP1-201ENST00000278412 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.86
SSRP1-201ENST00000278412 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
SSRP1-201ENST00000278412 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
SSRP1-201ENST00000278412 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
SSRP1-201ENST00000278412 KRTAP9-4Q9BYQ2 154 aa3.31□□□□□ -1.88
SSRP1-201ENST00000278412 LCE1DQ5T752 114 aa3.3□□□□□ -1.88
SSRP1-201ENST00000278412 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
SSRP1-201ENST00000278412 LCE4AQ5TA78 99 aa3.24□□□□□ -1.89
SSRP1-201ENST00000278412 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
SSRP1-201ENST00000278412 MT3P25713 68 aa3.11□□□□□ -1.91
SSRP1-201ENST00000278412 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.91
SSRP1-201ENST00000278412 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
SSRP1-201ENST00000278412 KRTAP9-9Q9BYP9 154 aa3.07□□□□□ -1.92
SSRP1-201ENST00000278412 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
SSRP1-201ENST00000278412 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
SSRP1-201ENST00000278412 PRM1P04553 51 aa3.01□□□□□ -1.93
SSRP1-201ENST00000278412 AHNAK2Q8IVF2 5795 aa2.95□□□□□ -1.94
SSRP1-201ENST00000278412 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
SSRP1-201ENST00000278412 KRTAP4-11Q9BYQ6 195 aa2.79□□□□□ -1.96
SSRP1-201ENST00000278412 LCE1EQ5T753 118 aa2.77□□□□□ -1.97
SSRP1-201ENST00000278412 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
SSRP1-201ENST00000278412 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
SSRP1-201ENST00000278412 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
SSRP1-201ENST00000278412 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
SSRP1-201ENST00000278412 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
SSRP1-201ENST00000278412 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
SSRP1-201ENST00000278412 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
SSRP1-201ENST00000278412 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
SSRP1-201ENST00000278412 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
SSRP1-201ENST00000278412 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
SSRP1-201ENST00000278412 KRTAP5-7Q6L8G8 165 aa2.49□□□□□ -2.01
SSRP1-201ENST00000278412 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
SSRP1-201ENST00000278412 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
SSRP1-201ENST00000278412 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
SSRP1-201ENST00000278412 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
SSRP1-201ENST00000278412 KRTAP5-11Q6L8G4 156 aa2.21□□□□□ -2.06
SSRP1-201ENST00000278412 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
SSRP1-201ENST00000278412 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
SSRP1-201ENST00000278412 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
SSRP1-201ENST00000278412 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms