RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 KRTAP10-7P60409 375 aaPredicted RBP2.91□□□□□ -1.94
TRIM6-201ENST00000278302 USH2AO75445 5202 aa2.87□□□□□ -1.95
TRIM6-201ENST00000278302 KRTAP19-5Q3LI72 72 aa2.8□□□□□ -1.96
TRIM6-201ENST00000278302 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
TRIM6-201ENST00000278302 KMT2DO14686 5537 aa2.76□□□□□ -1.97
TRIM6-201ENST00000278302 KRTAP9-6A8MVA2 160 aa2.75□□□□□ -1.97
TRIM6-201ENST00000278302 LCE3CQ5T5A8 94 aa2.75□□□□□ -1.97
TRIM6-201ENST00000278302 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
TRIM6-201ENST00000278302 KRTAP2-3P0C7H8 128 aa2.67□□□□□ -1.98
TRIM6-201ENST00000278302 KRTAP2-4Q9BYR9 128 aa2.67□□□□□ -1.98
TRIM6-201ENST00000278302 KRTAP2-1Q9BYU5 128 aa2.67□□□□□ -1.98
TRIM6-201ENST00000278302 KRTAP19-7Q3SYF9 63 aa2.64□□□□□ -1.99
TRIM6-201ENST00000278302 SSPOA2VEC9 5147 aa2.63□□□□□ -1.99
TRIM6-201ENST00000278302 SYNE2Q8WXH0 6885 aaKnown RBP2.61□□□□□ -1.99
TRIM6-201ENST00000278302 MT1EP04732 61 aa2.58□□□□□ -2
TRIM6-201ENST00000278302 MT1LQ93083 61 aa2.58□□□□□ -2
TRIM6-201ENST00000278302 KRTAP19-4Q3LI73 84 aa2.57□□□□□ -2
TRIM6-201ENST00000278302 KRTAP19-6Q3LI70 58 aa2.56□□□□□ -2
TRIM6-201ENST00000278302 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
TRIM6-201ENST00000278302 LCE5AQ5TCM9 118 aa2.51□□□□□ -2.01
TRIM6-201ENST00000278302 MACF1Q9UPN3 7388 aaKnown RBP2.51□□□□□ -2.01
TRIM6-201ENST00000278302 KRTAP5-9P26371 169 aa2.46□□□□□ -2.02
TRIM6-201ENST00000278302 FCGBPQ9Y6R7 5405 aaPredicted RBP2.46□□□□□ -2.02
TRIM6-201ENST00000278302 KRTAP4-3Q9BYR4 195 aa2.46□□□□□ -2.02
TRIM6-201ENST00000278302 MT1GP13640 62 aa2.43□□□□□ -2.02
TRIM6-201ENST00000278302 KRTAP19-3Q7Z4W3 81 aa2.43□□□□□ -2.02
TRIM6-201ENST00000278302 CRCT1Q9UGL9 99 aa2.42□□□□□ -2.02
TRIM6-201ENST00000278302 MT1MQ8N339 61 aa2.42□□□□□ -2.02
TRIM6-201ENST00000278302 MUC12Q9UKN1 5478 aa2.42□□□□□ -2.02
TRIM6-201ENST00000278302 SPRR2FQ96RM1 72 aa2.38□□□□□ -2.03
TRIM6-201ENST00000278302 MDN1Q9NU22 5596 aa2.38□□□□□ -2.03
TRIM6-201ENST00000278302 DSTQ03001 7570 aaKnown RBP2.37□□□□□ -2.03
TRIM6-201ENST00000278302 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
TRIM6-201ENST00000278302 LCE4AQ5TA78 99 aa2.33□□□□□ -2.04
TRIM6-201ENST00000278302 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
TRIM6-201ENST00000278302 KRTAP9-7A8MTY7 169 aa2.3□□□□□ -2.04
TRIM6-201ENST00000278302 PRM1P04553 51 aa2.28□□□□□ -2.04
TRIM6-201ENST00000278302 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
TRIM6-201ENST00000278302 KRTAP5-4Q6L8H1 288 aa2.24□□□□□ -2.05
TRIM6-201ENST00000278302 KRTAP6-3Q3LI67 103 aa2.21□□□□□ -2.06
TRIM6-201ENST00000278302 KRTAP5-5Q701N2 237 aaPredicted RBP2.21□□□□□ -2.06
TRIM6-201ENST00000278302 KRTAP6-1Q3LI64 71 aa2.19□□□□□ -2.06
TRIM6-201ENST00000278302 LCE1AQ5T7P2 110 aa2.19□□□□□ -2.06
TRIM6-201ENST00000278302 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
TRIM6-201ENST00000278302 SPRR2EP22531 72 aa2.18□□□□□ -2.06
TRIM6-201ENST00000278302 SPRR2BP35325 72 aa2.18□□□□□ -2.06
TRIM6-201ENST00000278302 SPRR2AP35326 72 aa2.18□□□□□ -2.06
TRIM6-201ENST00000278302 MT1AP04731 61 aa2.17□□□□□ -2.06
TRIM6-201ENST00000278302 LCE3EQ5T5B0 92 aa2.17□□□□□ -2.06
TRIM6-201ENST00000278302 LCE1EQ5T753 118 aa2.15□□□□□ -2.06
TRIM6-201ENST00000278302 KRTAP2-2Q9BYT5 123 aa2.12□□□□□ -2.07
TRIM6-201ENST00000278302 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
TRIM6-201ENST00000278302 SPRR2DP22532 72 aa2.08□□□□□ -2.08
TRIM6-201ENST00000278302 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
TRIM6-201ENST00000278302 NEBP20929 6669 aa2.06□□□□□ -2.08
TRIM6-201ENST00000278302 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
TRIM6-201ENST00000278302 MT3P25713 68 aa1.97□□□□□ -2.09
TRIM6-201ENST00000278302 KRTAP5-8O75690 187 aa1.96□□□□□ -2.1
TRIM6-201ENST00000278302 LCE1FQ5T754 118 aa1.95□□□□□ -2.1
TRIM6-201ENST00000278302 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
TRIM6-201ENST00000278302 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
TRIM6-201ENST00000278302 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
TRIM6-201ENST00000278302 GPR98Q8WXG9 6306 aa1.87□□□□□ -2.11
TRIM6-201ENST00000278302 MT4P47944 62 aa1.85□□□□□ -2.11
TRIM6-201ENST00000278302 KRTAP20-1Q3LI63 56 aa1.82□□□□□ -2.12
TRIM6-201ENST00000278302 KRTAP20-2Q3LI61 65 aa1.78□□□□□ -2.12
TRIM6-201ENST00000278302 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
TRIM6-201ENST00000278302 LCE1BQ5T7P3 118 aa1.62□□□□□ -2.15
TRIM6-201ENST00000278302 MUC5ACP98088 5654 aa1.62□□□□□ -2.15
TRIM6-201ENST00000278302 AHNAK2Q8IVF2 5795 aa1.62□□□□□ -2.15
TRIM6-201ENST00000278302 KRTAP5-10Q6L8G5 202 aa1.55□□□□□ -2.16
TRIM6-201ENST00000278302 KRTAP5-7Q6L8G8 165 aa1.5□□□□□ -2.17
TRIM6-201ENST00000278302 LCE1CQ5T751 118 aa1.5□□□□□ -2.17
TRIM6-201ENST00000278302 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
TRIM6-201ENST00000278302 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
TRIM6-201ENST00000278302 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
TRIM6-201ENST00000278302 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 80.6 ms