RNA–Protein interactions for RNA: ENST00000273398.7

ATP6V1A-201, Transcript of ATPase H+ transporting V1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1A, Length 4,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1A-201ENST00000273398 MT1HP80294 61 aa2.57□□□□□ -2
ATP6V1A-201ENST00000273398 HMCN2Q8NDA2 5059 aa2.56□□□□□ -2
ATP6V1A-201ENST00000273398 KRTAP19-2Q3LHN2 52 aa2.53□□□□□ -2
ATP6V1A-201ENST00000273398 MT1FP04733 61 aa2.52□□□□□ -2.01
ATP6V1A-201ENST00000273398 FLGP20930 4061 aaPredicted RBP2.52□□□□□ -2.01
ATP6V1A-201ENST00000273398 MT2AP02795 61 aa2.52□□□□□ -2.01
ATP6V1A-201ENST00000273398 LCE3AQ5TA76 89 aa2.51□□□□□ -2.01
ATP6V1A-201ENST00000273398 FSIP2Q5CZC0 6907 aa2.48□□□□□ -2.01
ATP6V1A-201ENST00000273398 KRTAP5-3Q6L8H2 238 aa2.47□□□□□ -2.01
ATP6V1A-201ENST00000273398 SPRR2GQ9BYE4 73 aa2.42□□□□□ -2.02
ATP6V1A-201ENST00000273398 USH2AO75445 5202 aa2.36□□□□□ -2.03
ATP6V1A-201ENST00000273398 MT1BP07438 61 aa2.35□□□□□ -2.03
ATP6V1A-201ENST00000273398 KRTAP6-3Q3LI67 103 aa2.34□□□□□ -2.03
ATP6V1A-201ENST00000273398 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
ATP6V1A-201ENST00000273398 KRTAP9-6A8MVA2 160 aa2.32□□□□□ -2.04
ATP6V1A-201ENST00000273398 MT1XP80297 61 aa2.31□□□□□ -2.04
ATP6V1A-201ENST00000273398 KRTAP19-8Q3LI54 63 aa2.3□□□□□ -2.04
ATP6V1A-201ENST00000273398 KMT2DO14686 5537 aa2.24□□□□□ -2.05
ATP6V1A-201ENST00000273398 KRTAP19-5Q3LI72 72 aa2.23□□□□□ -2.05
ATP6V1A-201ENST00000273398 CRCT1Q9UGL9 99 aa2.22□□□□□ -2.05
ATP6V1A-201ENST00000273398 KRTAP8-1Q8IUC2 63 aa2.2□□□□□ -2.06
ATP6V1A-201ENST00000273398 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
ATP6V1A-201ENST00000273398 DSTQ03001 7570 aaKnown RBP2.12□□□□□ -2.07
ATP6V1A-201ENST00000273398 SPRR2FQ96RM1 72 aa2.11□□□□□ -2.07
ATP6V1A-201ENST00000273398 SSPOA2VEC9 5147 aa2.11□□□□□ -2.07
ATP6V1A-201ENST00000273398 FCGBPQ9Y6R7 5405 aaPredicted RBP2.06□□□□□ -2.08
ATP6V1A-201ENST00000273398 MUC12Q9UKN1 5478 aa2.06□□□□□ -2.08
ATP6V1A-201ENST00000273398 SYNE1Q8NF91 8797 aaKnown RBP2.06□□□□□ -2.08
ATP6V1A-201ENST00000273398 KRTAP19-6Q3LI70 58 aa2.03□□□□□ -2.08
ATP6V1A-201ENST00000273398 KRTAP19-7Q3SYF9 63 aa2.03□□□□□ -2.08
ATP6V1A-201ENST00000273398 KRTAP4-3Q9BYR4 195 aa2.03□□□□□ -2.08
ATP6V1A-201ENST00000273398 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
ATP6V1A-201ENST00000273398 MT1EP04732 61 aa2.02□□□□□ -2.09
ATP6V1A-201ENST00000273398 MT1GP13640 62 aa2.01□□□□□ -2.09
ATP6V1A-201ENST00000273398 MT1LQ93083 61 aa2.01□□□□□ -2.09
ATP6V1A-201ENST00000273398 KRTAP2-3P0C7H8 128 aa2□□□□□ -2.09
ATP6V1A-201ENST00000273398 KRTAP2-4Q9BYR9 128 aa2□□□□□ -2.09
ATP6V1A-201ENST00000273398 KRTAP2-1Q9BYU5 128 aa2□□□□□ -2.09
ATP6V1A-201ENST00000273398 SYNE2Q8WXH0 6885 aaKnown RBP1.98□□□□□ -2.09
ATP6V1A-201ENST00000273398 MACF1Q9UPN3 7388 aaKnown RBP1.98□□□□□ -2.09
ATP6V1A-201ENST00000273398 KRTAP20-1Q3LI63 56 aa1.95□□□□□ -2.1
ATP6V1A-201ENST00000273398 SPRR2EP22531 72 aa1.94□□□□□ -2.1
ATP6V1A-201ENST00000273398 SPRR2BP35325 72 aa1.94□□□□□ -2.1
ATP6V1A-201ENST00000273398 SPRR2AP35326 72 aa1.94□□□□□ -2.1
ATP6V1A-201ENST00000273398 KRTAP19-3Q7Z4W3 81 aa1.94□□□□□ -2.1
ATP6V1A-201ENST00000273398 MT1MQ8N339 61 aa1.92□□□□□ -2.1
ATP6V1A-201ENST00000273398 SPRR2DP22532 72 aa1.88□□□□□ -2.11
ATP6V1A-201ENST00000273398 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
ATP6V1A-201ENST00000273398 MDN1Q9NU22 5596 aa1.86□□□□□ -2.11
ATP6V1A-201ENST00000273398 KRTAP6-1Q3LI64 71 aa1.74□□□□□ -2.13
ATP6V1A-201ENST00000273398 MT4P47944 62 aa1.72□□□□□ -2.13
ATP6V1A-201ENST00000273398 NEBP20929 6669 aa1.7□□□□□ -2.14
ATP6V1A-201ENST00000273398 LCE1CQ5T751 118 aa1.7□□□□□ -2.14
ATP6V1A-201ENST00000273398 LCE1BQ5T7P3 118 aa1.7□□□□□ -2.14
ATP6V1A-201ENST00000273398 MT1AP04731 61 aa1.68□□□□□ -2.14
ATP6V1A-201ENST00000273398 KRTAP5-9P26371 169 aa1.68□□□□□ -2.14
ATP6V1A-201ENST00000273398 KRTAP5-1Q6L8H4 278 aa1.66□□□□□ -2.14
ATP6V1A-201ENST00000273398 KRTAP5-5Q701N2 237 aaPredicted RBP1.63□□□□□ -2.15
ATP6V1A-201ENST00000273398 KRTAP6-2Q3LI66 62 aa1.62□□□□□ -2.15
ATP6V1A-201ENST00000273398 PRM1P04553 51 aa1.61□□□□□ -2.15
ATP6V1A-201ENST00000273398 KRTAP5-4Q6L8H1 288 aa1.58□□□□□ -2.16
ATP6V1A-201ENST00000273398 HMCN1Q96RW7 5635 aa1.55□□□□□ -2.16
ATP6V1A-201ENST00000273398 KRTAP20-2Q3LI61 65 aa1.45□□□□□ -2.18
ATP6V1A-201ENST00000273398 KRTAP5-7Q6L8G8 165 aa1.42□□□□□ -2.18
ATP6V1A-201ENST00000273398 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.42□□□□□ -2.18
ATP6V1A-201ENST00000273398 KRTAP4-4Q9BYR3 166 aa1.39□□□□□ -2.19
ATP6V1A-201ENST00000273398 MUC5ACP98088 5654 aa1.38□□□□□ -2.19
ATP6V1A-201ENST00000273398 AHNAK2Q8IVF2 5795 aa1.36□□□□□ -2.19
ATP6V1A-201ENST00000273398 KRTAP5-2Q701N4 177 aa1.34□□□□□ -2.19
ATP6V1A-201ENST00000273398 MUC5BQ9HC84 5762 aaPredicted RBP1.28□□□□□ -2.2
ATP6V1A-201ENST00000273398 AHNAKQ09666 5890 aaKnown RBP1.21□□□□□ -2.22
ATP6V1A-201ENST00000273398 KRTAP5-10Q6L8G5 202 aa1.17□□□□□ -2.22
ATP6V1A-201ENST00000273398 KRTAP5-8O75690 187 aa1.15□□□□□ -2.23
ATP6V1A-201ENST00000273398 KRTAP21-2Q3LI59 83 aa1.12□□□□□ -2.23
ATP6V1A-201ENST00000273398 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
ATP6V1A-201ENST00000273398 PHGR1C9JFL3 82 aa1.03□□□□□ -2.24
ATP6V1A-201ENST00000273398 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 86.4 ms