RNA–Protein interactions for RNA: ENST00000269834.1

ZIM3-201, Transcript of zinc finger imprinted 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIM3, Length 2,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3-201ENST00000269834 KRTAP2-4Q9BYR9 128 aa3.39□□□□□ -1.87
ZIM3-201ENST00000269834 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
ZIM3-201ENST00000269834 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
ZIM3-201ENST00000269834 TNP1P09430 55 aa3.31□□□□□ -1.88
ZIM3-201ENST00000269834 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
ZIM3-201ENST00000269834 FLGP20930 4061 aaPredicted RBP3.27□□□□□ -1.89
ZIM3-201ENST00000269834 FSIP2Q5CZC0 6907 aa3.24□□□□□ -1.89
ZIM3-201ENST00000269834 SPRR2GQ9BYE4 73 aa3.22□□□□□ -1.89
ZIM3-201ENST00000269834 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
ZIM3-201ENST00000269834 KRTAP2-1Q9BYU5 128 aa3.2□□□□□ -1.9
ZIM3-201ENST00000269834 USH2AO75445 5202 aa3.2□□□□□ -1.9
ZIM3-201ENST00000269834 SYNE2Q8WXH0 6885 aaKnown RBP3.18□□□□□ -1.9
ZIM3-201ENST00000269834 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
ZIM3-201ENST00000269834 KRTAP10-10P60014 251 aa3.14□□□□□ -1.91
ZIM3-201ENST00000269834 MT1HP80294 61 aa3.11□□□□□ -1.91
ZIM3-201ENST00000269834 KRTAP10-7P60409 375 aaPredicted RBP3.1□□□□□ -1.91
ZIM3-201ENST00000269834 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
ZIM3-201ENST00000269834 LCE3AQ5TA76 89 aa3.09□□□□□ -1.91
ZIM3-201ENST00000269834 FCGBPQ9Y6R7 5405 aaPredicted RBP3.08□□□□□ -1.92
ZIM3-201ENST00000269834 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
ZIM3-201ENST00000269834 KRTAP8-1Q8IUC2 63 aa3.07□□□□□ -1.92
ZIM3-201ENST00000269834 KRTAP19-8Q3LI54 63 aa3.07□□□□□ -1.92
ZIM3-201ENST00000269834 MT2AP02795 61 aa3.05□□□□□ -1.92
ZIM3-201ENST00000269834 M0R2T5 61 aa3.04□□□□□ -1.92
ZIM3-201ENST00000269834 MT1FP04733 61 aa3.04□□□□□ -1.92
ZIM3-201ENST00000269834 MACF1Q9UPN3 7388 aaKnown RBP3.02□□□□□ -1.93
ZIM3-201ENST00000269834 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
ZIM3-201ENST00000269834 MT1XP80297 61 aa2.98□□□□□ -1.93
ZIM3-201ENST00000269834 MT1BP07438 61 aa2.98□□□□□ -1.93
ZIM3-201ENST00000269834 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
ZIM3-201ENST00000269834 KRTAP12-3P60328 96 aa2.96□□□□□ -1.94
ZIM3-201ENST00000269834 KRTAP19-6Q3LI70 58 aa2.95□□□□□ -1.94
ZIM3-201ENST00000269834 KRTAP5-9P26371 169 aa2.93□□□□□ -1.94
ZIM3-201ENST00000269834 AHNAKQ09666 5890 aaKnown RBP2.92□□□□□ -1.94
ZIM3-201ENST00000269834 KRTAP5-10Q6L8G5 202 aa2.91□□□□□ -1.94
ZIM3-201ENST00000269834 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
ZIM3-201ENST00000269834 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
ZIM3-201ENST00000269834 KMT2DO14686 5537 aa2.87□□□□□ -1.95
ZIM3-201ENST00000269834 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
ZIM3-201ENST00000269834 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
ZIM3-201ENST00000269834 KRTAP12-4P60329 112 aa2.78□□□□□ -1.96
ZIM3-201ENST00000269834 KRTAP19-5Q3LI72 72 aa2.78□□□□□ -1.96
ZIM3-201ENST00000269834 MUC12Q9UKN1 5478 aa2.69□□□□□ -1.98
ZIM3-201ENST00000269834 KRTAP9-6A8MVA2 160 aa2.66□□□□□ -1.98
ZIM3-201ENST00000269834 KRTAP19-7Q3SYF9 63 aa2.66□□□□□ -1.98
ZIM3-201ENST00000269834 MDN1Q9NU22 5596 aa2.65□□□□□ -1.99
ZIM3-201ENST00000269834 SPRR2EP22531 72 aa2.62□□□□□ -1.99
ZIM3-201ENST00000269834 SPRR2BP35325 72 aa2.62□□□□□ -1.99
ZIM3-201ENST00000269834 SPRR2AP35326 72 aa2.62□□□□□ -1.99
ZIM3-201ENST00000269834 MT1LQ93083 61 aa2.59□□□□□ -1.99
ZIM3-201ENST00000269834 OBSCNQ5VST9 7968 aa2.58□□□□□ -2
ZIM3-201ENST00000269834 MT1EP04732 61 aa2.58□□□□□ -2
ZIM3-201ENST00000269834 SPRR2DP22532 72 aa2.58□□□□□ -2
ZIM3-201ENST00000269834 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
ZIM3-201ENST00000269834 MT1MQ8N339 61 aa2.41□□□□□ -2.02
ZIM3-201ENST00000269834 KRTAP4-3Q9BYR4 195 aa2.41□□□□□ -2.02
ZIM3-201ENST00000269834 MT1GP13640 62 aa2.4□□□□□ -2.02
ZIM3-201ENST00000269834 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
ZIM3-201ENST00000269834 KRTAP19-3Q7Z4W3 81 aa2.4□□□□□ -2.03
ZIM3-201ENST00000269834 SPRR2FQ96RM1 72 aa2.34□□□□□ -2.03
ZIM3-201ENST00000269834 MT1AP04731 61 aa2.28□□□□□ -2.04
ZIM3-201ENST00000269834 DSTQ03001 7570 aaKnown RBP2.17□□□□□ -2.06
ZIM3-201ENST00000269834 KRTAP6-1Q3LI64 71 aa2.17□□□□□ -2.06
ZIM3-201ENST00000269834 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.07
ZIM3-201ENST00000269834 MT4P47944 62 aa2.14□□□□□ -2.07
ZIM3-201ENST00000269834 PRM1P04553 51 aa2.1□□□□□ -2.07
ZIM3-201ENST00000269834 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
ZIM3-201ENST00000269834 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
ZIM3-201ENST00000269834 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
ZIM3-201ENST00000269834 SYNE1Q8NF91 8797 aaKnown RBP2.04□□□□□ -2.08
ZIM3-201ENST00000269834 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.09
ZIM3-201ENST00000269834 KRTAP6-2Q3LI66 62 aa1.99□□□□□ -2.09
ZIM3-201ENST00000269834 KRTAP20-2Q3LI61 65 aa1.97□□□□□ -2.09
ZIM3-201ENST00000269834 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
ZIM3-201ENST00000269834 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
ZIM3-201ENST00000269834 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
ZIM3-201ENST00000269834 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 67.3 ms