RNA–Protein interactions for RNA: ENST00000262962.11

CCDC94-201, Transcript of Coiled-coil domain-containing protein 94, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC94, Length 1,434 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94-201ENST00000262962 PMAIP1Q13794 54 aa6.25□□□□□ -1.41
CCDC94-201ENST00000262962 LCE1AQ5T7P2 110 aa6.24□□□□□ -1.41
CCDC94-201ENST00000262962 PP632Q6XCG6 107 aa6.2□□□□□ -1.42
CCDC94-201ENST00000262962 KRTAP12-3P60328 96 aa6.17□□□□□ -1.42
CCDC94-201ENST00000262962 KRTAP20-1Q3LI63 56 aa6.16□□□□□ -1.42
CCDC94-201ENST00000262962 SPRR2DP22532 72 aa6.12□□□□□ -1.43
CCDC94-201ENST00000262962 KRTAP19-3Q7Z4W3 81 aa6.1□□□□□ -1.43
CCDC94-201ENST00000262962 MT1LQ93083 61 aa6.06□□□□□ -1.44
CCDC94-201ENST00000262962 KRTAP2-3P0C7H8 128 aa6.05□□□□□ -1.44
CCDC94-201ENST00000262962 LCE5AQ5TCM9 118 aa6.05□□□□□ -1.44
CCDC94-201ENST00000262962 KRTAP2-4Q9BYR9 128 aa6.05□□□□□ -1.44
CCDC94-201ENST00000262962 MT1GP13640 62 aa6.01□□□□□ -1.45
CCDC94-201ENST00000262962 KRTAP15-1Q3LI76 137 aa5.95□□□□□ -1.46
CCDC94-201ENST00000262962 KTN1-AS1Q86SY8 53 aa5.92□□□□□ -1.46
CCDC94-201ENST00000262962 LCE3BQ5TA77 95 aa5.91□□□□□ -1.46
CCDC94-201ENST00000262962 MT1MQ8N339 61 aa5.91□□□□□ -1.46
CCDC94-201ENST00000262962 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
CCDC94-201ENST00000262962 KRTAP2-2Q9BYT5 123 aa5.88□□□□□ -1.47
CCDC94-201ENST00000262962 KRTAP2-1Q9BYU5 128 aa5.88□□□□□ -1.47
CCDC94-201ENST00000262962 PRAC1Q96KF2 57 aa5.87□□□□□ -1.47
CCDC94-201ENST00000262962 DSTQ03001 7570 aaKnown RBP5.78□□□□□ -1.48
CCDC94-201ENST00000262962 KRTAP4-7Q9BYR0 210 aa5.76□□□□□ -1.49
CCDC94-201ENST00000262962 LCE3CQ5T5A8 94 aa5.74□□□□□ -1.49
CCDC94-201ENST00000262962 KRTAP4-3Q9BYR4 195 aa5.74□□□□□ -1.49
CCDC94-201ENST00000262962 LOC100996750A0A140TA64 210 aa5.44□□□□□ -1.54
CCDC94-201ENST00000262962 KRTAP4-9Q9BYQ8 210 aa5.43□□□□□ -1.54
CCDC94-201ENST00000262962 LCE4AQ5TA78 99 aa5.4□□□□□ -1.55
CCDC94-201ENST00000262962 KRTAP9-6A8MVA2 160 aa5.39□□□□□ -1.55
CCDC94-201ENST00000262962 KRTAP5-5Q701N2 237 aaPredicted RBP5.38□□□□□ -1.55
CCDC94-201ENST00000262962 MT4P47944 62 aa5.34□□□□□ -1.55
CCDC94-201ENST00000262962 KRTAP5-4Q6L8H1 288 aa5.34□□□□□ -1.55
CCDC94-201ENST00000262962 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
CCDC94-201ENST00000262962 SPRR5A0A1B0GTR4 108 aa5.29□□□□□ -1.56
CCDC94-201ENST00000262962 HMCN1Q96RW7 5635 aa5.22□□□□□ -1.57
CCDC94-201ENST00000262962 KRTAP4-6Q9BYQ5 205 aa5.18□□□□□ -1.58
CCDC94-201ENST00000262962 GPR98Q8WXG9 6306 aa5.17□□□□□ -1.58
CCDC94-201ENST00000262962 MT1AP04731 61 aa5.16□□□□□ -1.58
CCDC94-201ENST00000262962 KRTAP12-4P60329 112 aa5.12□□□□□ -1.59
CCDC94-201ENST00000262962 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
CCDC94-201ENST00000262962 SYNE1Q8NF91 8797 aaKnown RBP5.06□□□□□ -1.6
CCDC94-201ENST00000262962 KRTAP20-2Q3LI61 65 aa5.03□□□□□ -1.6
CCDC94-201ENST00000262962 KRTAP9-4Q9BYQ2 154 aa4.94□□□□□ -1.62
CCDC94-201ENST00000262962 LUZP6Q538Z0 58 aa4.9□□□□□ -1.62
CCDC94-201ENST00000262962 AHNAK2Q8IVF2 5795 aa4.9□□□□□ -1.63
CCDC94-201ENST00000262962 KRTAP5-3Q6L8H2 238 aa4.84□□□□□ -1.63
CCDC94-201ENST00000262962 KRTAP5-2Q701N4 177 aa4.78□□□□□ -1.64
CCDC94-201ENST00000262962 KRTAP6-2Q3LI66 62 aa4.77□□□□□ -1.65
CCDC94-201ENST00000262962 NDUFAF8A1L188 74 aa4.75□□□□□ -1.65
CCDC94-201ENST00000262962 KRTAP5-10Q6L8G5 202 aa4.75□□□□□ -1.65
CCDC94-201ENST00000262962 MT3P25713 68 aa4.71□□□□□ -1.66
CCDC94-201ENST00000262962 KRTAP5-7Q6L8G8 165 aa4.55□□□□□ -1.68
CCDC94-201ENST00000262962 KRTAP4-11Q9BYQ6 195 aa4.51□□□□□ -1.69
CCDC94-201ENST00000262962 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
CCDC94-201ENST00000262962 KRTAP5-8O75690 187 aa4.34□□□□□ -1.71
CCDC94-201ENST00000262962 LCE3DQ9BYE3 92 aa4.24□□□□□ -1.73
CCDC94-201ENST00000262962 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
CCDC94-201ENST00000262962 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
CCDC94-201ENST00000262962 KRTAP9-9Q9BYP9 154 aa4.1□□□□□ -1.75
CCDC94-201ENST00000262962 MUC5ACP98088 5654 aa4.09□□□□□ -1.75
CCDC94-201ENST00000262962 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
CCDC94-201ENST00000262962 INE1O15225 51 aa4.04□□□□□ -1.76
CCDC94-201ENST00000262962 MUC5BQ9HC84 5762 aaPredicted RBP4□□□□□ -1.77
CCDC94-201ENST00000262962 AHNAKQ09666 5890 aaKnown RBP3.97□□□□□ -1.77
CCDC94-201ENST00000262962 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
CCDC94-201ENST00000262962 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
CCDC94-201ENST00000262962 LCE1CQ5T751 118 aa3.9□□□□□ -1.78
CCDC94-201ENST00000262962 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
CCDC94-201ENST00000262962 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
CCDC94-201ENST00000262962 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
CCDC94-201ENST00000262962 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
CCDC94-201ENST00000262962 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
CCDC94-201ENST00000262962 PRM1P04553 51 aa3.34□□□□□ -1.88
CCDC94-201ENST00000262962 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
CCDC94-201ENST00000262962 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
CCDC94-201ENST00000262962 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
CCDC94-201ENST00000262962 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
CCDC94-201ENST00000262962 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 112.7 ms