RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 KRTAP23-1A1A580 65 aa9.04□□□□□ -0.96
SCN1B-201ENST00000262631 MT1EP04732 61 aa8.97□□□□□ -0.97
SCN1B-201ENST00000262631 NEBP20929 6669 aa8.9□□□□□ -0.98
SCN1B-201ENST00000262631 KRTAP12-3P60328 96 aa8.89□□□□□ -0.99
SCN1B-201ENST00000262631 LCE1AQ5T7P2 110 aa8.88□□□□□ -0.99
SCN1B-201ENST00000262631 SPRR2EP22531 72 aa8.88□□□□□ -0.99
SCN1B-201ENST00000262631 SPRR2BP35325 72 aa8.88□□□□□ -0.99
SCN1B-201ENST00000262631 SPRR2AP35326 72 aa8.88□□□□□ -0.99
SCN1B-201ENST00000262631 A0A0A0MQY5 61 aa8.87□□□□□ -0.99
SCN1B-201ENST00000262631 SPRR5A0A1B0GTR4 108 aa8.74□□□□□ -1.01
SCN1B-201ENST00000262631 KRTAP19-3Q7Z4W3 81 aa8.73□□□□□ -1.01
SCN1B-201ENST00000262631 MT1LQ93083 61 aa8.72□□□□□ -1.01
SCN1B-201ENST00000262631 LCE5AQ5TCM9 118 aa8.66□□□□□ -1.02
SCN1B-201ENST00000262631 KRTAP20-1Q3LI63 56 aa8.62□□□□□ -1.03
SCN1B-201ENST00000262631 MT1GP13640 62 aa8.58□□□□□ -1.04
SCN1B-201ENST00000262631 SPRR2DP22532 72 aa8.55□□□□□ -1.04
SCN1B-201ENST00000262631 KRTAP2-3P0C7H8 128 aa8.5□□□□□ -1.05
SCN1B-201ENST00000262631 KRTAP2-4Q9BYR9 128 aa8.5□□□□□ -1.05
SCN1B-201ENST00000262631 MT1MQ8N339 61 aa8.49□□□□□ -1.05
SCN1B-201ENST00000262631 KRTAP4-7Q9BYR0 210 aa8.41□□□□□ -1.06
SCN1B-201ENST00000262631 KRTAP4-3Q9BYR4 195 aa8.34□□□□□ -1.07
SCN1B-201ENST00000262631 KRTAP19-4Q3LI73 84 aa8.28□□□□□ -1.08
SCN1B-201ENST00000262631 DSTQ03001 7570 aaKnown RBP8.28□□□□□ -1.08
SCN1B-201ENST00000262631 LCE3CQ5T5A8 94 aa8.27□□□□□ -1.09
SCN1B-201ENST00000262631 LCE3BQ5TA77 95 aa8.27□□□□□ -1.09
SCN1B-201ENST00000262631 KRTAP2-2Q9BYT5 123 aa8.26□□□□□ -1.09
SCN1B-201ENST00000262631 KRTAP2-1Q9BYU5 128 aa8.26□□□□□ -1.09
SCN1B-201ENST00000262631 INE1O15225 51 aa8.08□□□□□ -1.12
SCN1B-201ENST00000262631 LOC100996750A0A140TA64 210 aa7.92□□□□□ -1.14
SCN1B-201ENST00000262631 KRTAP9-6A8MVA2 160 aa7.86□□□□□ -1.15
SCN1B-201ENST00000262631 KRTAP5-5Q701N2 237 aaPredicted RBP7.73□□□□□ -1.17
SCN1B-201ENST00000262631 KRTAP5-4Q6L8H1 288 aa7.63□□□□□ -1.19
SCN1B-201ENST00000262631 KRTAP4-9Q9BYQ8 210 aa7.57□□□□□ -1.2
SCN1B-201ENST00000262631 LCE4AQ5TA78 99 aa7.57□□□□□ -1.2
SCN1B-201ENST00000262631 MT4P47944 62 aa7.46□□□□□ -1.22
SCN1B-201ENST00000262631 LCE1DQ5T752 114 aa7.44□□□□□ -1.22
SCN1B-201ENST00000262631 MT1AP04731 61 aa7.39□□□□□ -1.23
SCN1B-201ENST00000262631 KRTAP4-6Q9BYQ5 205 aa7.37□□□□□ -1.23
SCN1B-201ENST00000262631 KRTAP6-1Q3LI64 71 aa7.36□□□□□ -1.23
SCN1B-201ENST00000262631 HMCN1Q96RW7 5635 aa7.35□□□□□ -1.23
SCN1B-201ENST00000262631 SYNE1Q8NF91 8797 aaKnown RBP7.28□□□□□ -1.24
SCN1B-201ENST00000262631 KRTAP12-4P60329 112 aa7.27□□□□□ -1.25
SCN1B-201ENST00000262631 KRTAP20-2Q3LI61 65 aa7.16□□□□□ -1.26
SCN1B-201ENST00000262631 KRTAP9-4Q9BYQ2 154 aa7.07□□□□□ -1.28
SCN1B-201ENST00000262631 KRTAP5-3Q6L8H2 238 aa6.93□□□□□ -1.3
SCN1B-201ENST00000262631 GPR98Q8WXG9 6306 aa6.88□□□□□ -1.31
SCN1B-201ENST00000262631 KRTAP6-2Q3LI66 62 aa6.87□□□□□ -1.31
SCN1B-201ENST00000262631 KRTAP5-2Q701N4 177 aa6.83□□□□□ -1.32
SCN1B-201ENST00000262631 AHNAK2Q8IVF2 5795 aa6.8□□□□□ -1.32
SCN1B-201ENST00000262631 KRTAP5-10Q6L8G5 202 aa6.73□□□□□ -1.33
SCN1B-201ENST00000262631 MT3P25713 68 aa6.71□□□□□ -1.33
SCN1B-201ENST00000262631 KRTAP5-7Q6L8G8 165 aa6.42□□□□□ -1.38
SCN1B-201ENST00000262631 OBSCNQ5VST9 7968 aa6.34□□□□□ -1.39
SCN1B-201ENST00000262631 KRTAP4-11Q9BYQ6 195 aa6.33□□□□□ -1.4
SCN1B-201ENST00000262631 KRTAP5-8O75690 187 aa6.12□□□□□ -1.43
SCN1B-201ENST00000262631 LCE3DQ9BYE3 92 aa6.1□□□□□ -1.43
SCN1B-201ENST00000262631 KRTAP5-1Q6L8H4 278 aa6□□□□□ -1.45
SCN1B-201ENST00000262631 LCE1EQ5T753 118 aa5.96□□□□□ -1.46
SCN1B-201ENST00000262631 LCE3EQ5T5B0 92 aa5.86□□□□□ -1.47
SCN1B-201ENST00000262631 MUC5ACP98088 5654 aa5.79□□□□□ -1.48
SCN1B-201ENST00000262631 KRTAP9-9Q9BYP9 154 aa5.72□□□□□ -1.49
SCN1B-201ENST00000262631 KRTAP4-2Q9BYR5 136 aa5.63□□□□□ -1.51
SCN1B-201ENST00000262631 LCE1BQ5T7P3 118 aa5.61□□□□□ -1.51
SCN1B-201ENST00000262631 LCE1CQ5T751 118 aa5.56□□□□□ -1.52
SCN1B-201ENST00000262631 MUC5BQ9HC84 5762 aaPredicted RBP5.55□□□□□ -1.52
SCN1B-201ENST00000262631 PRM1P04553 51 aa5.54□□□□□ -1.52
SCN1B-201ENST00000262631 AHNAKQ09666 5890 aaKnown RBP5.44□□□□□ -1.54
SCN1B-201ENST00000262631 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.15□□□□□ -1.59
SCN1B-201ENST00000262631 KRTAP5-11Q6L8G4 156 aa4.96□□□□□ -1.62
SCN1B-201ENST00000262631 KRTAP4-12Q9BQ66 201 aa4.84□□□□□ -1.63
SCN1B-201ENST00000262631 KRTAP21-2Q3LI59 83 aa4.83□□□□□ -1.64
SCN1B-201ENST00000262631 LCE1FQ5T754 118 aa4.58□□□□□ -1.68
SCN1B-201ENST00000262631 KRTAP4-4Q9BYR3 166 aa4.35□□□□□ -1.71
SCN1B-201ENST00000262631 PHGR1C9JFL3 82 aa4.27□□□□□ -1.73
SCN1B-201ENST00000262631 MUC19Q7Z5P9 8384 aa3.83□□□□□ -1.8
SCN1B-201ENST00000262631 KRTAP21-1Q3LI58 79 aa3.62□□□□□ -1.83
SCN1B-201ENST00000262631 MUC16Q8WXI7 14507 aa2.65□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms