RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 SPRR2FQ96RM1 72 aa6.05□□□□□ -1.44
HLA-F-216ENST00000259951 KRTAP20-1Q3LI63 56 aa6.04□□□□□ -1.44
HLA-F-216ENST00000259951 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
HLA-F-216ENST00000259951 H3BS24 57 aa5.98□□□□□ -1.45
HLA-F-216ENST00000259951 MT1LQ93083 61 aa5.96□□□□□ -1.45
HLA-F-216ENST00000259951 SPRR2EP22531 72 aa5.93□□□□□ -1.46
HLA-F-216ENST00000259951 SPRR2BP35325 72 aa5.93□□□□□ -1.46
HLA-F-216ENST00000259951 SPRR2AP35326 72 aa5.93□□□□□ -1.46
HLA-F-216ENST00000259951 KRTAP19-3Q7Z4W3 81 aa5.89□□□□□ -1.47
HLA-F-216ENST00000259951 SPRR5A0A1B0GTR4 108 aa5.88□□□□□ -1.47
HLA-F-216ENST00000259951 LCE3CQ5T5A8 94 aa5.87□□□□□ -1.47
HLA-F-216ENST00000259951 LCE1AQ5T7P2 110 aa5.86□□□□□ -1.47
HLA-F-216ENST00000259951 NDUFAF8A1L188 74 aa5.85□□□□□ -1.47
HLA-F-216ENST00000259951 MT1GP13640 62 aa5.85□□□□□ -1.47
HLA-F-216ENST00000259951 LUZP6Q538Z0 58 aa5.85□□□□□ -1.47
HLA-F-216ENST00000259951 KRTAP2-3P0C7H8 128 aa5.85□□□□□ -1.47
HLA-F-216ENST00000259951 KRTAP2-4Q9BYR9 128 aa5.85□□□□□ -1.47
HLA-F-216ENST00000259951 LCE5AQ5TCM9 118 aa5.79□□□□□ -1.48
HLA-F-216ENST00000259951 MT1MQ8N339 61 aa5.75□□□□□ -1.49
HLA-F-216ENST00000259951 SPRR2DP22532 72 aa5.73□□□□□ -1.49
HLA-F-216ENST00000259951 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
HLA-F-216ENST00000259951 KRTAP2-2Q9BYT5 123 aa5.67□□□□□ -1.5
HLA-F-216ENST00000259951 KRTAP2-1Q9BYU5 128 aa5.67□□□□□ -1.5
HLA-F-216ENST00000259951 LCE3BQ5TA77 95 aa5.58□□□□□ -1.52
HLA-F-216ENST00000259951 KRTAP4-3Q9BYR4 195 aa5.57□□□□□ -1.52
HLA-F-216ENST00000259951 DSTQ03001 7570 aaKnown RBP5.49□□□□□ -1.53
HLA-F-216ENST00000259951 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
HLA-F-216ENST00000259951 LOC100996750A0A140TA64 210 aa5.36□□□□□ -1.55
HLA-F-216ENST00000259951 A0A0A0MQY5 61 aa5.3□□□□□ -1.56
HLA-F-216ENST00000259951 GPR98Q8WXG9 6306 aa5.26□□□□□ -1.57
HLA-F-216ENST00000259951 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
HLA-F-216ENST00000259951 KRTAP5-5Q701N2 237 aaPredicted RBP5.18□□□□□ -1.58
HLA-F-216ENST00000259951 MT1AP04731 61 aa5.09□□□□□ -1.59
HLA-F-216ENST00000259951 LCE1DQ5T752 114 aa5.07□□□□□ -1.6
HLA-F-216ENST00000259951 LCE4AQ5TA78 99 aa5.06□□□□□ -1.6
HLA-F-216ENST00000259951 HMCN1Q96RW7 5635 aa5.03□□□□□ -1.6
HLA-F-216ENST00000259951 MT4P47944 62 aa5.02□□□□□ -1.61
HLA-F-216ENST00000259951 KRTAP6-1Q3LI64 71 aa5□□□□□ -1.61
HLA-F-216ENST00000259951 KRTAP5-4Q6L8H1 288 aa5□□□□□ -1.61
HLA-F-216ENST00000259951 INE1O15225 51 aa4.93□□□□□ -1.62
HLA-F-216ENST00000259951 KRTAP12-4P60329 112 aa4.9□□□□□ -1.63
HLA-F-216ENST00000259951 KRTAP4-6Q9BYQ5 205 aa4.89□□□□□ -1.63
HLA-F-216ENST00000259951 AHNAK2Q8IVF2 5795 aa4.88□□□□□ -1.63
HLA-F-216ENST00000259951 KRTAP9-4Q9BYQ2 154 aa4.84□□□□□ -1.63
HLA-F-216ENST00000259951 SYNE1Q8NF91 8797 aaKnown RBP4.81□□□□□ -1.64
HLA-F-216ENST00000259951 KRTAP5-10Q6L8G5 202 aa4.73□□□□□ -1.65
HLA-F-216ENST00000259951 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
HLA-F-216ENST00000259951 MT3P25713 68 aa4.64□□□□□ -1.67
HLA-F-216ENST00000259951 KRTAP6-2Q3LI66 62 aa4.64□□□□□ -1.67
HLA-F-216ENST00000259951 KRTAP5-3Q6L8H2 238 aa4.6□□□□□ -1.67
HLA-F-216ENST00000259951 KRTAP5-7Q6L8G8 165 aa4.56□□□□□ -1.68
HLA-F-216ENST00000259951 KRTAP5-2Q701N4 177 aa4.51□□□□□ -1.69
HLA-F-216ENST00000259951 LCE3DQ9BYE3 92 aa4.4□□□□□ -1.7
HLA-F-216ENST00000259951 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
HLA-F-216ENST00000259951 LCE3EQ5T5B0 92 aa4.28□□□□□ -1.72
HLA-F-216ENST00000259951 OBSCNQ5VST9 7968 aa4.25□□□□□ -1.73
HLA-F-216ENST00000259951 KRTAP5-8O75690 187 aa4.14□□□□□ -1.75
HLA-F-216ENST00000259951 AHNAKQ09666 5890 aaKnown RBP4.06□□□□□ -1.76
HLA-F-216ENST00000259951 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
HLA-F-216ENST00000259951 MUC5ACP98088 5654 aa4.03□□□□□ -1.76
HLA-F-216ENST00000259951 MUC5BQ9HC84 5762 aaPredicted RBP4.02□□□□□ -1.77
HLA-F-216ENST00000259951 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
HLA-F-216ENST00000259951 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
HLA-F-216ENST00000259951 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
HLA-F-216ENST00000259951 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
HLA-F-216ENST00000259951 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
HLA-F-216ENST00000259951 PRM1P04553 51 aa3.71□□□□□ -1.82
HLA-F-216ENST00000259951 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
HLA-F-216ENST00000259951 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
HLA-F-216ENST00000259951 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
HLA-F-216ENST00000259951 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
HLA-F-216ENST00000259951 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
HLA-F-216ENST00000259951 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
HLA-F-216ENST00000259951 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
HLA-F-216ENST00000259951 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
HLA-F-216ENST00000259951 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.04
HLA-F-216ENST00000259951 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 112.8 ms