RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 SPRR2BP35325 72 aa6.58□□□□□ -1.36
SRSF1-201ENST00000258962 SPRR2AP35326 72 aa6.58□□□□□ -1.36
SRSF1-201ENST00000258962 KRTAP12-3P60328 96 aa6.53□□□□□ -1.36
SRSF1-201ENST00000258962 KRTAP19-5Q3LI72 72 aa6.51□□□□□ -1.37
SRSF1-201ENST00000258962 KRTAP20-1Q3LI63 56 aa6.49□□□□□ -1.37
SRSF1-201ENST00000258962 LCE1AQ5T7P2 110 aa6.49□□□□□ -1.37
SRSF1-201ENST00000258962 KRTAP19-7Q3SYF9 63 aa6.44□□□□□ -1.38
SRSF1-201ENST00000258962 KRTAP2-3P0C7H8 128 aa6.39□□□□□ -1.39
SRSF1-201ENST00000258962 KRTAP2-4Q9BYR9 128 aa6.39□□□□□ -1.39
SRSF1-201ENST00000258962 SPRR2DP22532 72 aa6.35□□□□□ -1.39
SRSF1-201ENST00000258962 LUZP6Q538Z0 58 aa6.33□□□□□ -1.4
SRSF1-201ENST00000258962 MT1EP04732 61 aa6.32□□□□□ -1.4
SRSF1-201ENST00000258962 SPRR5A0A1B0GTR4 108 aa6.3□□□□□ -1.4
SRSF1-201ENST00000258962 KRTAP19-4Q3LI73 84 aa6.28□□□□□ -1.4
SRSF1-201ENST00000258962 MT1LQ93083 61 aa6.2□□□□□ -1.42
SRSF1-201ENST00000258962 KRTAP2-2Q9BYT5 123 aa6.2□□□□□ -1.42
SRSF1-201ENST00000258962 KRTAP2-1Q9BYU5 128 aa6.2□□□□□ -1.42
SRSF1-201ENST00000258962 KRTAP19-3Q7Z4W3 81 aa6.18□□□□□ -1.42
SRSF1-201ENST00000258962 NDUFAF8A1L188 74 aa6.17□□□□□ -1.42
SRSF1-201ENST00000258962 LCE3BQ5TA77 95 aa6.15□□□□□ -1.42
SRSF1-201ENST00000258962 LCE5AQ5TCM9 118 aa6.15□□□□□ -1.43
SRSF1-201ENST00000258962 KRTAP4-12Q9BQ66 201 aa6.13□□□□□ -1.43
SRSF1-201ENST00000258962 LCE3CQ5T5A8 94 aa6.1□□□□□ -1.43
SRSF1-201ENST00000258962 MT1GP13640 62 aa6.07□□□□□ -1.44
SRSF1-201ENST00000258962 KRTAP9-9Q9BYP9 154 aa6.05□□□□□ -1.44
SRSF1-201ENST00000258962 KRTAP9-4Q9BYQ2 154 aa6.05□□□□□ -1.44
SRSF1-201ENST00000258962 KRTAP4-7Q9BYR0 210 aa6.03□□□□□ -1.44
SRSF1-201ENST00000258962 MT1MQ8N339 61 aa5.94□□□□□ -1.46
SRSF1-201ENST00000258962 DSTQ03001 7570 aaKnown RBP5.92□□□□□ -1.46
SRSF1-201ENST00000258962 KRTAP4-3Q9BYR4 195 aa5.87□□□□□ -1.47
SRSF1-201ENST00000258962 KRTAP9-6A8MVA2 160 aa5.83□□□□□ -1.48
SRSF1-201ENST00000258962 GPR98Q8WXG9 6306 aa5.78□□□□□ -1.48
SRSF1-201ENST00000258962 LCE1DQ5T752 114 aa5.75□□□□□ -1.49
SRSF1-201ENST00000258962 H3BS24 57 aa5.72□□□□□ -1.49
SRSF1-201ENST00000258962 KRTAP4-9Q9BYQ8 210 aa5.66□□□□□ -1.5
SRSF1-201ENST00000258962 LCE4AQ5TA78 99 aa5.63□□□□□ -1.51
SRSF1-201ENST00000258962 A0A0A0MQY5 61 aa5.62□□□□□ -1.51
SRSF1-201ENST00000258962 KRTAP4-2Q9BYR5 136 aa5.55□□□□□ -1.52
SRSF1-201ENST00000258962 MT4P47944 62 aa5.54□□□□□ -1.52
SRSF1-201ENST00000258962 KRTAP5-4Q6L8H1 288 aa5.53□□□□□ -1.52
SRSF1-201ENST00000258962 HMCN1Q96RW7 5635 aa5.42□□□□□ -1.54
SRSF1-201ENST00000258962 KRTAP5-5Q701N2 237 aaPredicted RBP5.4□□□□□ -1.54
SRSF1-201ENST00000258962 KRTAP4-11Q9BYQ6 195 aa5.38□□□□□ -1.55
SRSF1-201ENST00000258962 KRTAP12-4P60329 112 aa5.29□□□□□ -1.56
SRSF1-201ENST00000258962 MT1AP04731 61 aa5.26□□□□□ -1.57
SRSF1-201ENST00000258962 INE1O15225 51 aa5.23□□□□□ -1.57
SRSF1-201ENST00000258962 KRTAP6-1Q3LI64 71 aa5.23□□□□□ -1.57
SRSF1-201ENST00000258962 KRTAP20-2Q3LI61 65 aa5.22□□□□□ -1.57
SRSF1-201ENST00000258962 AHNAK2Q8IVF2 5795 aa5.17□□□□□ -1.58
SRSF1-201ENST00000258962 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
SRSF1-201ENST00000258962 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
SRSF1-201ENST00000258962 KRTAP5-10Q6L8G5 202 aa5.02□□□□□ -1.61
SRSF1-201ENST00000258962 KRTAP5-2Q701N4 177 aa4.87□□□□□ -1.63
SRSF1-201ENST00000258962 KRTAP5-7Q6L8G8 165 aa4.86□□□□□ -1.63
SRSF1-201ENST00000258962 KRTAP6-2Q3LI66 62 aa4.82□□□□□ -1.64
SRSF1-201ENST00000258962 MT3P25713 68 aa4.73□□□□□ -1.65
SRSF1-201ENST00000258962 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
SRSF1-201ENST00000258962 OBSCNQ5VST9 7968 aa4.54□□□□□ -1.68
SRSF1-201ENST00000258962 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
SRSF1-201ENST00000258962 KRTAP5-8O75690 187 aa4.53□□□□□ -1.68
SRSF1-201ENST00000258962 AHNAKQ09666 5890 aaKnown RBP4.4□□□□□ -1.71
SRSF1-201ENST00000258962 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
SRSF1-201ENST00000258962 MUC5ACP98088 5654 aa4.27□□□□□ -1.73
SRSF1-201ENST00000258962 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
SRSF1-201ENST00000258962 MUC5BQ9HC84 5762 aaPredicted RBP4.21□□□□□ -1.73
SRSF1-201ENST00000258962 LCE1BQ5T7P3 118 aa4.02□□□□□ -1.77
SRSF1-201ENST00000258962 PRM1P04553 51 aa3.98□□□□□ -1.77
SRSF1-201ENST00000258962 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
SRSF1-201ENST00000258962 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
SRSF1-201ENST00000258962 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
SRSF1-201ENST00000258962 KRTAP21-2Q3LI59 83 aa3.42□□□□□ -1.86
SRSF1-201ENST00000258962 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
SRSF1-201ENST00000258962 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
SRSF1-201ENST00000258962 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
SRSF1-201ENST00000258962 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
SRSF1-201ENST00000258962 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
SRSF1-201ENST00000258962 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 59.4 ms