RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 SPRR2FQ96RM1 72 aa9.84□□□□□ -0.83
CCM2-201ENST00000258781 MT1LQ93083 61 aa9.8□□□□□ -0.84
CCM2-201ENST00000258781 KRTAP5-9P26371 169 aa9.79□□□□□ -0.84
CCM2-201ENST00000258781 MDN1Q9NU22 5596 aa9.68□□□□□ -0.86
CCM2-201ENST00000258781 KRTAP6-3Q3LI67 103 aa9.68□□□□□ -0.86
CCM2-201ENST00000258781 KRTAP9-7A8MTY7 169 aa9.53□□□□□ -0.88
CCM2-201ENST00000258781 KRTAP19-3Q7Z4W3 81 aa9.51□□□□□ -0.89
CCM2-201ENST00000258781 KRTAP4-7Q9BYR0 210 aa9.51□□□□□ -0.89
CCM2-201ENST00000258781 H3BS24 57 aa9.49□□□□□ -0.89
CCM2-201ENST00000258781 LCE1AQ5T7P2 110 aa9.44□□□□□ -0.9
CCM2-201ENST00000258781 MT1GP13640 62 aa9.42□□□□□ -0.9
CCM2-201ENST00000258781 LCE5AQ5TCM9 118 aa9.38□□□□□ -0.91
CCM2-201ENST00000258781 SPRR2EP22531 72 aa9.37□□□□□ -0.91
CCM2-201ENST00000258781 SPRR2BP35325 72 aa9.37□□□□□ -0.91
CCM2-201ENST00000258781 SPRR2AP35326 72 aa9.37□□□□□ -0.91
CCM2-201ENST00000258781 KRTAP9-6A8MVA2 160 aa9.36□□□□□ -0.91
CCM2-201ENST00000258781 MT1MQ8N339 61 aa9.34□□□□□ -0.91
CCM2-201ENST00000258781 KRTAP4-3Q9BYR4 195 aa9.18□□□□□ -0.94
CCM2-201ENST00000258781 NEBP20929 6669 aa9.18□□□□□ -0.94
CCM2-201ENST00000258781 DSTQ03001 7570 aaKnown RBP9.1□□□□□ -0.95
CCM2-201ENST00000258781 SPRR2DP22532 72 aa9.02□□□□□ -0.97
CCM2-201ENST00000258781 A0A0A0MQY5 61 aa9□□□□□ -0.97
CCM2-201ENST00000258781 LOC100996750A0A140TA64 210 aa8.92□□□□□ -0.98
CCM2-201ENST00000258781 KRTAP2-3P0C7H8 128 aa8.83□□□□□ -1
CCM2-201ENST00000258781 KRTAP2-4Q9BYR9 128 aa8.83□□□□□ -1
CCM2-201ENST00000258781 KRTAP2-1Q9BYU5 128 aa8.83□□□□□ -1
CCM2-201ENST00000258781 LCE3BQ5TA77 95 aa8.69□□□□□ -1.02
CCM2-201ENST00000258781 KRTAP5-5Q701N2 237 aaPredicted RBP8.43□□□□□ -1.06
CCM2-201ENST00000258781 KRTAP20-1Q3LI63 56 aa8.4□□□□□ -1.06
CCM2-201ENST00000258781 INE1O15225 51 aa8.38□□□□□ -1.07
CCM2-201ENST00000258781 MT1AP04731 61 aa8.32□□□□□ -1.08
CCM2-201ENST00000258781 KRTAP2-2Q9BYT5 123 aa8.3□□□□□ -1.08
CCM2-201ENST00000258781 KRTAP6-1Q3LI64 71 aa8.24□□□□□ -1.09
CCM2-201ENST00000258781 KRTAP5-4Q6L8H1 288 aa8.13□□□□□ -1.11
CCM2-201ENST00000258781 SYNE1Q8NF91 8797 aaKnown RBP8.1□□□□□ -1.11
CCM2-201ENST00000258781 LCE4AQ5TA78 99 aa7.96□□□□□ -1.14
CCM2-201ENST00000258781 MT4P47944 62 aa7.88□□□□□ -1.15
CCM2-201ENST00000258781 KRTAP4-9Q9BYQ8 210 aa7.88□□□□□ -1.15
CCM2-201ENST00000258781 KRTAP9-4Q9BYQ2 154 aa7.87□□□□□ -1.15
CCM2-201ENST00000258781 KRTAP4-6Q9BYQ5 205 aa7.82□□□□□ -1.16
CCM2-201ENST00000258781 KRTAP12-4P60329 112 aa7.8□□□□□ -1.16
CCM2-201ENST00000258781 LCE1DQ5T752 114 aa7.78□□□□□ -1.16
CCM2-201ENST00000258781 HMCN1Q96RW7 5635 aa7.77□□□□□ -1.16
CCM2-201ENST00000258781 KRTAP20-2Q3LI61 65 aa7.62□□□□□ -1.19
CCM2-201ENST00000258781 KRTAP6-2Q3LI66 62 aa7.53□□□□□ -1.2
CCM2-201ENST00000258781 MT3P25713 68 aa7.51□□□□□ -1.21
CCM2-201ENST00000258781 LCE3DQ9BYE3 92 aa7.47□□□□□ -1.21
CCM2-201ENST00000258781 KRTAP5-3Q6L8H2 238 aa7.35□□□□□ -1.23
CCM2-201ENST00000258781 KRTAP5-2Q701N4 177 aa7.34□□□□□ -1.23
CCM2-201ENST00000258781 LCE3EQ5T5B0 92 aa7.31□□□□□ -1.24
CCM2-201ENST00000258781 OBSCNQ5VST9 7968 aa7.13□□□□□ -1.27
CCM2-201ENST00000258781 AHNAK2Q8IVF2 5795 aa6.94□□□□□ -1.3
CCM2-201ENST00000258781 KRTAP4-11Q9BYQ6 195 aa6.65□□□□□ -1.34
CCM2-201ENST00000258781 KRTAP5-10Q6L8G5 202 aa6.58□□□□□ -1.36
CCM2-201ENST00000258781 PRM1P04553 51 aa6.54□□□□□ -1.36
CCM2-201ENST00000258781 LCE1EQ5T753 118 aa6.45□□□□□ -1.38
CCM2-201ENST00000258781 KRTAP5-8O75690 187 aa6.42□□□□□ -1.38
CCM2-201ENST00000258781 KRTAP5-1Q6L8H4 278 aa6.4□□□□□ -1.39
CCM2-201ENST00000258781 GPR98Q8WXG9 6306 aa6.4□□□□□ -1.39
CCM2-201ENST00000258781 MUC5ACP98088 5654 aa6.23□□□□□ -1.41
CCM2-201ENST00000258781 KRTAP5-7Q6L8G8 165 aa6.14□□□□□ -1.43
CCM2-201ENST00000258781 LCE1BQ5T7P3 118 aa6.1□□□□□ -1.43
CCM2-201ENST00000258781 KRTAP4-2Q9BYR5 136 aa6.09□□□□□ -1.43
CCM2-201ENST00000258781 LCE1CQ5T751 118 aa6.02□□□□□ -1.44
CCM2-201ENST00000258781 KRTAP9-9Q9BYP9 154 aa5.77□□□□□ -1.49
CCM2-201ENST00000258781 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.67□□□□□ -1.5
CCM2-201ENST00000258781 MUC5BQ9HC84 5762 aaPredicted RBP5.63□□□□□ -1.51
CCM2-201ENST00000258781 KRTAP21-2Q3LI59 83 aa5.39□□□□□ -1.55
CCM2-201ENST00000258781 KRTAP5-11Q6L8G4 156 aa5.34□□□□□ -1.55
CCM2-201ENST00000258781 AHNAKQ09666 5890 aaKnown RBP5.27□□□□□ -1.57
CCM2-201ENST00000258781 KRTAP4-12Q9BQ66 201 aa5.15□□□□□ -1.59
CCM2-201ENST00000258781 LCE1FQ5T754 118 aa4.83□□□□□ -1.64
CCM2-201ENST00000258781 KRTAP4-4Q9BYR3 166 aa4.79□□□□□ -1.64
CCM2-201ENST00000258781 PHGR1C9JFL3 82 aa4.6□□□□□ -1.67
CCM2-201ENST00000258781 MUC19Q7Z5P9 8384 aa4.27□□□□□ -1.73
CCM2-201ENST00000258781 KRTAP21-1Q3LI58 79 aa4.07□□□□□ -1.76
CCM2-201ENST00000258781 MUC16Q8WXI7 14507 aa2.98□□□□□ -1.93
Retrieved 77 of 20,778 RNA–protein pairs in 53.1 ms