RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 BIRC6Q9NR09 4857 aa1.89□□□□□ -2.11
USP44-201ENST00000258499 KRTAP5-1Q6L8H4 278 aa1.88□□□□□ -2.11
USP44-201ENST00000258499 UBR4Q5T4S7 5183 aa1.88□□□□□ -2.11
USP44-201ENST00000258499 HMCN2Q8NDA2 5059 aa1.85□□□□□ -2.11
USP44-201ENST00000258499 SPRR5A0A1B0GTR4 108 aa1.85□□□□□ -2.11
USP44-201ENST00000258499 KRTAP8-1Q8IUC2 63 aa1.85□□□□□ -2.11
USP44-201ENST00000258499 KRTAP10-7P60409 375 aaPredicted RBP1.84□□□□□ -2.11
USP44-201ENST00000258499 MT1XP80297 61 aa1.84□□□□□ -2.12
USP44-201ENST00000258499 MT1BP07438 61 aa1.83□□□□□ -2.12
USP44-201ENST00000258499 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
USP44-201ENST00000258499 KRTAP10-5P60370 271 aa1.83□□□□□ -2.12
USP44-201ENST00000258499 KRTAP19-8Q3LI54 63 aa1.82□□□□□ -2.12
USP44-201ENST00000258499 INE1O15225 51 aa1.79□□□□□ -2.12
USP44-201ENST00000258499 KRTAP19-5Q3LI72 72 aa1.79□□□□□ -2.12
USP44-201ENST00000258499 LCE1EQ5T753 118 aa1.79□□□□□ -2.12
USP44-201ENST00000258499 USH2AO75445 5202 aa1.76□□□□□ -2.13
USP44-201ENST00000258499 FSIP2Q5CZC0 6907 aa1.75□□□□□ -2.13
USP44-201ENST00000258499 LCE3CQ5T5A8 94 aa1.75□□□□□ -2.13
USP44-201ENST00000258499 CRCT1Q9UGL9 99 aa1.74□□□□□ -2.13
USP44-201ENST00000258499 KMT2DO14686 5537 aa1.73□□□□□ -2.13
USP44-201ENST00000258499 KRTAP9-6A8MVA2 160 aa1.63□□□□□ -2.15
USP44-201ENST00000258499 KRTAP19-7Q3SYF9 63 aa1.62□□□□□ -2.15
USP44-201ENST00000258499 SYNE1Q8NF91 8797 aaKnown RBP1.61□□□□□ -2.15
USP44-201ENST00000258499 DSTQ03001 7570 aaKnown RBP1.61□□□□□ -2.15
USP44-201ENST00000258499 MT1LQ93083 61 aa1.61□□□□□ -2.15
USP44-201ENST00000258499 MT1GP13640 62 aa1.6□□□□□ -2.15
USP44-201ENST00000258499 OBSCNQ5VST9 7968 aa1.6□□□□□ -2.15
USP44-201ENST00000258499 FCGBPQ9Y6R7 5405 aaPredicted RBP1.59□□□□□ -2.15
USP44-201ENST00000258499 MT1EP04732 61 aa1.59□□□□□ -2.15
USP44-201ENST00000258499 KRTAP4-3Q9BYR4 195 aa1.58□□□□□ -2.16
USP44-201ENST00000258499 KRTAP5-8O75690 187 aa1.57□□□□□ -2.16
USP44-201ENST00000258499 SPRR2FQ96RM1 72 aa1.57□□□□□ -2.16
USP44-201ENST00000258499 LCE1AQ5T7P2 110 aa1.55□□□□□ -2.16
USP44-201ENST00000258499 MUC12Q9UKN1 5478 aa1.55□□□□□ -2.16
USP44-201ENST00000258499 KRTAP2-3P0C7H8 128 aa1.54□□□□□ -2.16
USP44-201ENST00000258499 KRTAP12-4P60329 112 aa1.54□□□□□ -2.16
USP44-201ENST00000258499 KRTAP2-4Q9BYR9 128 aa1.54□□□□□ -2.16
USP44-201ENST00000258499 KRTAP2-1Q9BYU5 128 aa1.54□□□□□ -2.16
USP44-201ENST00000258499 KRTAP19-3Q7Z4W3 81 aa1.51□□□□□ -2.17
USP44-201ENST00000258499 SSPOA2VEC9 5147 aa1.51□□□□□ -2.17
USP44-201ENST00000258499 MT1MQ8N339 61 aa1.5□□□□□ -2.17
USP44-201ENST00000258499 KRTAP19-6Q3LI70 58 aa1.5□□□□□ -2.17
USP44-201ENST00000258499 SYNE2Q8WXH0 6885 aaKnown RBP1.47□□□□□ -2.17
USP44-201ENST00000258499 KRTAP2-2Q9BYT5 123 aa1.45□□□□□ -2.18
USP44-201ENST00000258499 LCE3DQ9BYE3 92 aa1.42□□□□□ -2.18
USP44-201ENST00000258499 MT3P25713 68 aa1.41□□□□□ -2.18
USP44-201ENST00000258499 SPRR2EP22531 72 aa1.4□□□□□ -2.18
USP44-201ENST00000258499 SPRR2BP35325 72 aa1.4□□□□□ -2.18
USP44-201ENST00000258499 SPRR2AP35326 72 aa1.4□□□□□ -2.18
USP44-201ENST00000258499 MACF1Q9UPN3 7388 aaKnown RBP1.4□□□□□ -2.19
USP44-201ENST00000258499 LCE1FQ5T754 118 aa1.39□□□□□ -2.19
USP44-201ENST00000258499 LCE3EQ5T5B0 92 aa1.39□□□□□ -2.19
USP44-201ENST00000258499 KRTAP6-1Q3LI64 71 aa1.38□□□□□ -2.19
USP44-201ENST00000258499 PRM1P04553 51 aa1.36□□□□□ -2.19
USP44-201ENST00000258499 MDN1Q9NU22 5596 aa1.35□□□□□ -2.19
USP44-201ENST00000258499 MT1AP04731 61 aa1.35□□□□□ -2.19
USP44-201ENST00000258499 SPRR2DP22532 72 aa1.33□□□□□ -2.2
USP44-201ENST00000258499 GPR98Q8WXG9 6306 aa1.31□□□□□ -2.2
USP44-201ENST00000258499 KRTAP20-1Q3LI63 56 aa1.29□□□□□ -2.2
USP44-201ENST00000258499 KRTAP6-2Q3LI66 62 aa1.27□□□□□ -2.21
USP44-201ENST00000258499 KRTAP5-5Q701N2 237 aaPredicted RBP1.24□□□□□ -2.21
USP44-201ENST00000258499 MT4P47944 62 aa1.24□□□□□ -2.21
USP44-201ENST00000258499 KRTAP6-3Q3LI67 103 aa1.22□□□□□ -2.21
USP44-201ENST00000258499 LCE1BQ5T7P3 118 aa1.15□□□□□ -2.23
USP44-201ENST00000258499 AHNAKQ09666 5890 aaKnown RBP1.11□□□□□ -2.23
USP44-201ENST00000258499 NEBP20929 6669 aa1.11□□□□□ -2.23
USP44-201ENST00000258499 LCE1CQ5T751 118 aa1.11□□□□□ -2.23
USP44-201ENST00000258499 AHNAK2Q8IVF2 5795 aa1.1□□□□□ -2.23
USP44-201ENST00000258499 KRTAP20-2Q3LI61 65 aa1.07□□□□□ -2.24
USP44-201ENST00000258499 MUC19Q7Z5P9 8384 aa1.06□□□□□ -2.24
USP44-201ENST00000258499 MUC5ACP98088 5654 aa1.01□□□□□ -2.25
USP44-201ENST00000258499 KRTAP5-7Q6L8G8 165 aa0.98□□□□□ -2.25
USP44-201ENST00000258499 KRTAP5-10Q6L8G5 202 aa0.92□□□□□ -2.26
USP44-201ENST00000258499 KRTAP21-2Q3LI59 83 aa0.82□□□□□ -2.28
USP44-201ENST00000258499 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
USP44-201ENST00000258499 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
USP44-201ENST00000258499 PHGR1C9JFL3 82 aa0.64□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 65.3 ms