RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
NIP7-202ENST00000254941 PP632Q6XCG6 107 aa3.71□□□□□ -1.82
NIP7-202ENST00000254941 CRCT1Q9UGL9 99 aa3.69□□□□□ -1.82
NIP7-202ENST00000254941 FCGBPQ9Y6R7 5405 aaPredicted RBP3.68□□□□□ -1.82
NIP7-202ENST00000254941 LCE3AQ5TA76 89 aa3.68□□□□□ -1.82
NIP7-202ENST00000254941 KMT2DO14686 5537 aa3.62□□□□□ -1.83
NIP7-202ENST00000254941 KRTAP8-1Q8IUC2 63 aa3.62□□□□□ -1.83
NIP7-202ENST00000254941 KRTAP12-3P60328 96 aa3.54□□□□□ -1.84
NIP7-202ENST00000254941 A0A0A0MQY5 61 aa3.53□□□□□ -1.84
NIP7-202ENST00000254941 KRTAP19-5Q3LI72 72 aa3.53□□□□□ -1.84
NIP7-202ENST00000254941 KRTAP19-7Q3SYF9 63 aa3.51□□□□□ -1.85
NIP7-202ENST00000254941 MACF1Q9UPN3 7388 aaKnown RBP3.51□□□□□ -1.85
NIP7-202ENST00000254941 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
NIP7-202ENST00000254941 KRTAP5-9P26371 169 aa3.45□□□□□ -1.86
NIP7-202ENST00000254941 MT1EP04732 61 aa3.44□□□□□ -1.86
NIP7-202ENST00000254941 LCE1AQ5T7P2 110 aa3.41□□□□□ -1.86
NIP7-202ENST00000254941 SPRR2FQ96RM1 72 aa3.39□□□□□ -1.87
NIP7-202ENST00000254941 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
NIP7-202ENST00000254941 SYNE2Q8WXH0 6885 aaKnown RBP3.38□□□□□ -1.87
NIP7-202ENST00000254941 MT1LQ93083 61 aa3.37□□□□□ -1.87
NIP7-202ENST00000254941 MUC12Q9UKN1 5478 aa3.36□□□□□ -1.87
NIP7-202ENST00000254941 NDUFAF8A1L188 74 aa3.35□□□□□ -1.87
NIP7-202ENST00000254941 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
NIP7-202ENST00000254941 KRTAP5-4Q6L8H1 288 aa3.33□□□□□ -1.88
NIP7-202ENST00000254941 KRTAP19-3Q7Z4W3 81 aa3.32□□□□□ -1.88
NIP7-202ENST00000254941 LCE3CQ5T5A8 94 aa3.31□□□□□ -1.88
NIP7-202ENST00000254941 MT1GP13640 62 aa3.29□□□□□ -1.88
NIP7-202ENST00000254941 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
NIP7-202ENST00000254941 KRTAP2-2Q9BYT5 123 aa3.29□□□□□ -1.88
NIP7-202ENST00000254941 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
NIP7-202ENST00000254941 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
NIP7-202ENST00000254941 MT1MQ8N339 61 aa3.24□□□□□ -1.89
NIP7-202ENST00000254941 MDN1Q9NU22 5596 aa3.23□□□□□ -1.89
NIP7-202ENST00000254941 SPRR2EP22531 72 aa3.22□□□□□ -1.89
NIP7-202ENST00000254941 SPRR2BP35325 72 aa3.22□□□□□ -1.89
NIP7-202ENST00000254941 SPRR2AP35326 72 aa3.22□□□□□ -1.89
NIP7-202ENST00000254941 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
NIP7-202ENST00000254941 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
NIP7-202ENST00000254941 SPRR2DP22532 72 aa3.11□□□□□ -1.91
NIP7-202ENST00000254941 DSTQ03001 7570 aaKnown RBP3.1□□□□□ -1.91
NIP7-202ENST00000254941 NEBP20929 6669 aa3.05□□□□□ -1.92
NIP7-202ENST00000254941 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
NIP7-202ENST00000254941 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
NIP7-202ENST00000254941 KRTAP2-3P0C7H8 128 aa2.92□□□□□ -1.94
NIP7-202ENST00000254941 KRTAP2-4Q9BYR9 128 aa2.92□□□□□ -1.94
NIP7-202ENST00000254941 MT3P25713 68 aa2.88□□□□□ -1.95
NIP7-202ENST00000254941 KRTAP2-1Q9BYU5 128 aa2.88□□□□□ -1.95
NIP7-202ENST00000254941 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
NIP7-202ENST00000254941 MT1AP04731 61 aa2.86□□□□□ -1.95
NIP7-202ENST00000254941 KRTAP20-1Q3LI63 56 aa2.86□□□□□ -1.95
NIP7-202ENST00000254941 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.96
NIP7-202ENST00000254941 INE1O15225 51 aa2.81□□□□□ -1.96
NIP7-202ENST00000254941 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
NIP7-202ENST00000254941 SYNE1Q8NF91 8797 aaKnown RBP2.76□□□□□ -1.97
NIP7-202ENST00000254941 KRTAP12-4P60329 112 aa2.73□□□□□ -1.97
NIP7-202ENST00000254941 MT4P47944 62 aa2.69□□□□□ -1.98
NIP7-202ENST00000254941 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
NIP7-202ENST00000254941 KRTAP6-2Q3LI66 62 aa2.62□□□□□ -1.99
NIP7-202ENST00000254941 KRTAP5-8O75690 187 aa2.54□□□□□ -2
NIP7-202ENST00000254941 GPR98Q8WXG9 6306 aa2.49□□□□□ -2.01
NIP7-202ENST00000254941 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
NIP7-202ENST00000254941 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
NIP7-202ENST00000254941 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
NIP7-202ENST00000254941 AHNAK2Q8IVF2 5795 aa2.32□□□□□ -2.04
NIP7-202ENST00000254941 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
NIP7-202ENST00000254941 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
NIP7-202ENST00000254941 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
NIP7-202ENST00000254941 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
NIP7-202ENST00000254941 MUC5ACP98088 5654 aa2.08□□□□□ -2.08
NIP7-202ENST00000254941 PRM1P04553 51 aa2.07□□□□□ -2.08
NIP7-202ENST00000254941 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
NIP7-202ENST00000254941 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
NIP7-202ENST00000254941 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
NIP7-202ENST00000254941 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
NIP7-202ENST00000254941 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
NIP7-202ENST00000254941 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
NIP7-202ENST00000254941 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 144.3 ms