RNA–Protein interactions for RNA: ENST00000252725.9

ARPC1B-201, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARPC1B, Length 1,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-201ENST00000252725 NEBP20929 6669 aa6.78□□□□□ -1.32
ARPC1B-201ENST00000252725 KRTAP19-7Q3SYF9 63 aa6.78□□□□□ -1.32
ARPC1B-201ENST00000252725 LCE4AQ5TA78 99 aa6.77□□□□□ -1.33
ARPC1B-201ENST00000252725 MDN1Q9NU22 5596 aa6.75□□□□□ -1.33
ARPC1B-201ENST00000252725 KRTAP19-5Q3LI72 72 aa6.71□□□□□ -1.34
ARPC1B-201ENST00000252725 KRTAP19-4Q3LI73 84 aa6.71□□□□□ -1.34
ARPC1B-201ENST00000252725 LCE1AQ5T7P2 110 aa6.71□□□□□ -1.34
ARPC1B-201ENST00000252725 SPRR2EP22531 72 aa6.7□□□□□ -1.34
ARPC1B-201ENST00000252725 SPRR2BP35325 72 aa6.7□□□□□ -1.34
ARPC1B-201ENST00000252725 SPRR2AP35326 72 aa6.7□□□□□ -1.34
ARPC1B-201ENST00000252725 NDUFAF8A1L188 74 aa6.69□□□□□ -1.34
ARPC1B-201ENST00000252725 MT1EP04732 61 aa6.68□□□□□ -1.34
ARPC1B-201ENST00000252725 KRTAP23-1A1A580 65 aa6.61□□□□□ -1.35
ARPC1B-201ENST00000252725 KRTAP12-3P60328 96 aa6.53□□□□□ -1.36
ARPC1B-201ENST00000252725 LCE1DQ5T752 114 aa6.52□□□□□ -1.36
ARPC1B-201ENST00000252725 KRTAP19-3Q7Z4W3 81 aa6.52□□□□□ -1.36
ARPC1B-201ENST00000252725 LCE5AQ5TCM9 118 aa6.49□□□□□ -1.37
ARPC1B-201ENST00000252725 SPRR2DP22532 72 aa6.48□□□□□ -1.37
ARPC1B-201ENST00000252725 MT1LQ93083 61 aa6.46□□□□□ -1.38
ARPC1B-201ENST00000252725 PP632Q6XCG6 107 aa6.44□□□□□ -1.38
ARPC1B-201ENST00000252725 A0A0A0MQY5 61 aa6.43□□□□□ -1.38
ARPC1B-201ENST00000252725 MT1GP13640 62 aa6.43□□□□□ -1.38
ARPC1B-201ENST00000252725 KRTAP20-1Q3LI63 56 aa6.4□□□□□ -1.39
ARPC1B-201ENST00000252725 KRTAP4-7Q9BYR0 210 aa6.39□□□□□ -1.39
ARPC1B-201ENST00000252725 KRTAP2-3P0C7H8 128 aa6.37□□□□□ -1.39
ARPC1B-201ENST00000252725 KRTAP2-4Q9BYR9 128 aa6.37□□□□□ -1.39
ARPC1B-201ENST00000252725 LUZP6Q538Z0 58 aa6.34□□□□□ -1.39
ARPC1B-201ENST00000252725 MT1MQ8N339 61 aa6.32□□□□□ -1.4
ARPC1B-201ENST00000252725 KRTAP4-9Q9BYQ8 210 aa6.32□□□□□ -1.4
ARPC1B-201ENST00000252725 DSTQ03001 7570 aaKnown RBP6.21□□□□□ -1.42
ARPC1B-201ENST00000252725 KRTAP2-2Q9BYT5 123 aa6.19□□□□□ -1.42
ARPC1B-201ENST00000252725 KRTAP2-1Q9BYU5 128 aa6.19□□□□□ -1.42
ARPC1B-201ENST00000252725 KRTAP4-3Q9BYR4 195 aa6.16□□□□□ -1.42
ARPC1B-201ENST00000252725 KRTAP4-11Q9BYQ6 195 aa6.14□□□□□ -1.43
ARPC1B-201ENST00000252725 KRTAP4-2Q9BYR5 136 aa6.14□□□□□ -1.43
ARPC1B-201ENST00000252725 LCE3CQ5T5A8 94 aa6.06□□□□□ -1.44
ARPC1B-201ENST00000252725 SPRR5A0A1B0GTR4 108 aa5.98□□□□□ -1.45
ARPC1B-201ENST00000252725 KRTAP5-4Q6L8H1 288 aa5.77□□□□□ -1.49
ARPC1B-201ENST00000252725 KRTAP5-5Q701N2 237 aaPredicted RBP5.77□□□□□ -1.49
ARPC1B-201ENST00000252725 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
ARPC1B-201ENST00000252725 INE1O15225 51 aa5.72□□□□□ -1.49
ARPC1B-201ENST00000252725 MT4P47944 62 aa5.62□□□□□ -1.51
ARPC1B-201ENST00000252725 HMCN1Q96RW7 5635 aa5.53□□□□□ -1.52
ARPC1B-201ENST00000252725 GPR98Q8WXG9 6306 aa5.53□□□□□ -1.52
ARPC1B-201ENST00000252725 MT1AP04731 61 aa5.5□□□□□ -1.53
ARPC1B-201ENST00000252725 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
ARPC1B-201ENST00000252725 SYNE1Q8NF91 8797 aaKnown RBP5.46□□□□□ -1.53
ARPC1B-201ENST00000252725 KRTAP6-1Q3LI64 71 aa5.45□□□□□ -1.54
ARPC1B-201ENST00000252725 KRTAP20-2Q3LI61 65 aa5.4□□□□□ -1.55
ARPC1B-201ENST00000252725 KRTAP5-3Q6L8H2 238 aa5.25□□□□□ -1.57
ARPC1B-201ENST00000252725 KRTAP5-2Q701N4 177 aa5.15□□□□□ -1.59
ARPC1B-201ENST00000252725 AHNAK2Q8IVF2 5795 aa5.13□□□□□ -1.59
ARPC1B-201ENST00000252725 KRTAP6-2Q3LI66 62 aa5.11□□□□□ -1.59
ARPC1B-201ENST00000252725 KRTAP5-10Q6L8G5 202 aa5.01□□□□□ -1.61
ARPC1B-201ENST00000252725 MT3P25713 68 aa5□□□□□ -1.61
ARPC1B-201ENST00000252725 OBSCNQ5VST9 7968 aa4.77□□□□□ -1.65
ARPC1B-201ENST00000252725 KRTAP5-7Q6L8G8 165 aa4.74□□□□□ -1.65
ARPC1B-201ENST00000252725 KRTAP5-8O75690 187 aa4.65□□□□□ -1.67
ARPC1B-201ENST00000252725 KRTAP5-1Q6L8H4 278 aa4.53□□□□□ -1.69
ARPC1B-201ENST00000252725 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
ARPC1B-201ENST00000252725 LCE3DQ9BYE3 92 aa4.46□□□□□ -1.7
ARPC1B-201ENST00000252725 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
ARPC1B-201ENST00000252725 LCE3EQ5T5B0 92 aa4.27□□□□□ -1.73
ARPC1B-201ENST00000252725 KRTAP5-11Q6L8G4 156 aa4.2□□□□□ -1.74
ARPC1B-201ENST00000252725 AHNAKQ09666 5890 aaKnown RBP4.19□□□□□ -1.74
ARPC1B-201ENST00000252725 LCE1CQ5T751 118 aa4.18□□□□□ -1.74
ARPC1B-201ENST00000252725 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
ARPC1B-201ENST00000252725 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
ARPC1B-201ENST00000252725 MUC5BQ9HC84 5762 aaPredicted RBP4.17□□□□□ -1.74
ARPC1B-201ENST00000252725 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
ARPC1B-201ENST00000252725 PRM1P04553 51 aa3.71□□□□□ -1.82
ARPC1B-201ENST00000252725 KRTAP21-2Q3LI59 83 aa3.59□□□□□ -1.83
ARPC1B-201ENST00000252725 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
ARPC1B-201ENST00000252725 PHGR1C9JFL3 82 aa3.21□□□□□ -1.89
ARPC1B-201ENST00000252725 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
ARPC1B-201ENST00000252725 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
ARPC1B-201ENST00000252725 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms