RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
SDF2-201ENST00000247020 KRTAP19-7Q3SYF9 63 aa5.24□□□□□ -1.57
SDF2-201ENST00000247020 LCE4AQ5TA78 99 aa5.21□□□□□ -1.58
SDF2-201ENST00000247020 KMT2DO14686 5537 aa5.2□□□□□ -1.58
SDF2-201ENST00000247020 LCE5AQ5TCM9 118 aa5.18□□□□□ -1.58
SDF2-201ENST00000247020 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
SDF2-201ENST00000247020 MT1EP04732 61 aa5.15□□□□□ -1.59
SDF2-201ENST00000247020 SPRR5A0A1B0GTR4 108 aa5.09□□□□□ -1.59
SDF2-201ENST00000247020 MT1LQ93083 61 aa5.05□□□□□ -1.6
SDF2-201ENST00000247020 KRTAP5-9P26371 169 aa5.01□□□□□ -1.61
SDF2-201ENST00000247020 LCE3CQ5T5A8 94 aa5.01□□□□□ -1.61
SDF2-201ENST00000247020 SPRR2FQ96RM1 72 aa5.01□□□□□ -1.61
SDF2-201ENST00000247020 NDUFAF8A1L188 74 aa4.98□□□□□ -1.61
SDF2-201ENST00000247020 MACF1Q9UPN3 7388 aaKnown RBP4.97□□□□□ -1.61
SDF2-201ENST00000247020 KRTAP19-3Q7Z4W3 81 aa4.96□□□□□ -1.62
SDF2-201ENST00000247020 MT1GP13640 62 aa4.94□□□□□ -1.62
SDF2-201ENST00000247020 KRTAP9-7A8MTY7 169 aa4.93□□□□□ -1.62
SDF2-201ENST00000247020 H3BS24 57 aa4.93□□□□□ -1.62
SDF2-201ENST00000247020 LUZP6Q538Z0 58 aa4.92□□□□□ -1.62
SDF2-201ENST00000247020 KRTAP6-3Q3LI67 103 aa4.9□□□□□ -1.63
SDF2-201ENST00000247020 MT1MQ8N339 61 aa4.85□□□□□ -1.63
SDF2-201ENST00000247020 MUC12Q9UKN1 5478 aa4.81□□□□□ -1.64
SDF2-201ENST00000247020 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
SDF2-201ENST00000247020 SYNE2Q8WXH0 6885 aaKnown RBP4.76□□□□□ -1.65
SDF2-201ENST00000247020 SPRR2EP22531 72 aa4.75□□□□□ -1.65
SDF2-201ENST00000247020 SPRR2BP35325 72 aa4.75□□□□□ -1.65
SDF2-201ENST00000247020 SPRR2AP35326 72 aa4.75□□□□□ -1.65
SDF2-201ENST00000247020 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
SDF2-201ENST00000247020 KRTAP4-3Q9BYR4 195 aa4.67□□□□□ -1.66
SDF2-201ENST00000247020 MDN1Q9NU22 5596 aa4.62□□□□□ -1.67
SDF2-201ENST00000247020 SPRR2DP22532 72 aa4.59□□□□□ -1.67
SDF2-201ENST00000247020 A0A0A0MQY5 61 aa4.43□□□□□ -1.7
SDF2-201ENST00000247020 KRTAP2-3P0C7H8 128 aa4.41□□□□□ -1.7
SDF2-201ENST00000247020 KRTAP2-4Q9BYR9 128 aa4.41□□□□□ -1.7
SDF2-201ENST00000247020 KRTAP2-1Q9BYU5 128 aa4.41□□□□□ -1.7
SDF2-201ENST00000247020 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
SDF2-201ENST00000247020 NEBP20929 6669 aa4.37□□□□□ -1.71
SDF2-201ENST00000247020 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
SDF2-201ENST00000247020 MT1AP04731 61 aa4.31□□□□□ -1.72
SDF2-201ENST00000247020 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
SDF2-201ENST00000247020 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
SDF2-201ENST00000247020 KRTAP5-4Q6L8H1 288 aa4.19□□□□□ -1.74
SDF2-201ENST00000247020 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
SDF2-201ENST00000247020 KRTAP20-1Q3LI63 56 aa4.16□□□□□ -1.74
SDF2-201ENST00000247020 INE1O15225 51 aa4.1□□□□□ -1.75
SDF2-201ENST00000247020 KRTAP12-4P60329 112 aa4.07□□□□□ -1.76
SDF2-201ENST00000247020 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
SDF2-201ENST00000247020 MT4P47944 62 aa3.93□□□□□ -1.78
SDF2-201ENST00000247020 MT3P25713 68 aa3.92□□□□□ -1.78
SDF2-201ENST00000247020 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
SDF2-201ENST00000247020 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
SDF2-201ENST00000247020 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
SDF2-201ENST00000247020 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
SDF2-201ENST00000247020 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
SDF2-201ENST00000247020 HMCN1Q96RW7 5635 aa3.76□□□□□ -1.81
SDF2-201ENST00000247020 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
SDF2-201ENST00000247020 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.84
SDF2-201ENST00000247020 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
SDF2-201ENST00000247020 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
SDF2-201ENST00000247020 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
SDF2-201ENST00000247020 AHNAK2Q8IVF2 5795 aa3.3□□□□□ -1.88
SDF2-201ENST00000247020 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
SDF2-201ENST00000247020 KRTAP5-10Q6L8G5 202 aa3.24□□□□□ -1.89
SDF2-201ENST00000247020 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
SDF2-201ENST00000247020 PRM1P04553 51 aa3.18□□□□□ -1.9
SDF2-201ENST00000247020 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
SDF2-201ENST00000247020 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
SDF2-201ENST00000247020 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
SDF2-201ENST00000247020 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
SDF2-201ENST00000247020 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
SDF2-201ENST00000247020 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
SDF2-201ENST00000247020 LCE1FQ5T754 118 aa2.56□□□□□ -2
SDF2-201ENST00000247020 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
SDF2-201ENST00000247020 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
SDF2-201ENST00000247020 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
SDF2-201ENST00000247020 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
SDF2-201ENST00000247020 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 101.3 ms