RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 KRTAP19-4Q3LI73 84 aa5.4□□□□□ -1.54
DDX49-201ENST00000247003 MT1EP04732 61 aa5.36□□□□□ -1.55
DDX49-201ENST00000247003 MT1LQ93083 61 aa5.31□□□□□ -1.56
DDX49-201ENST00000247003 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
DDX49-201ENST00000247003 NEBP20929 6669 aa5.19□□□□□ -1.58
DDX49-201ENST00000247003 KRTAP9-6A8MVA2 160 aa5.16□□□□□ -1.58
DDX49-201ENST00000247003 KRTAP6-3Q3LI67 103 aa5.16□□□□□ -1.58
DDX49-201ENST00000247003 KRTAP20-1Q3LI63 56 aa5.13□□□□□ -1.59
DDX49-201ENST00000247003 INE1O15225 51 aa5.11□□□□□ -1.59
DDX49-201ENST00000247003 KRTAP19-3Q7Z4W3 81 aa5.09□□□□□ -1.59
DDX49-201ENST00000247003 MT1GP13640 62 aa5.07□□□□□ -1.6
DDX49-201ENST00000247003 MUC12Q9UKN1 5478 aa5.04□□□□□ -1.6
DDX49-201ENST00000247003 MT1MQ8N339 61 aa5.03□□□□□ -1.6
DDX49-201ENST00000247003 SPRR2FQ96RM1 72 aa5.03□□□□□ -1.6
DDX49-201ENST00000247003 KRTAP5-9P26371 169 aa5.01□□□□□ -1.61
DDX49-201ENST00000247003 KRTAP2-3P0C7H8 128 aa4.95□□□□□ -1.62
DDX49-201ENST00000247003 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
DDX49-201ENST00000247003 KRTAP2-4Q9BYR9 128 aa4.95□□□□□ -1.62
DDX49-201ENST00000247003 KRTAP2-1Q9BYU5 128 aa4.95□□□□□ -1.62
DDX49-201ENST00000247003 LCE5AQ5TCM9 118 aa4.92□□□□□ -1.62
DDX49-201ENST00000247003 MDN1Q9NU22 5596 aa4.88□□□□□ -1.63
DDX49-201ENST00000247003 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
DDX49-201ENST00000247003 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
DDX49-201ENST00000247003 SPRR2EP22531 72 aa4.78□□□□□ -1.64
DDX49-201ENST00000247003 SPRR2BP35325 72 aa4.78□□□□□ -1.64
DDX49-201ENST00000247003 SPRR2AP35326 72 aa4.78□□□□□ -1.64
DDX49-201ENST00000247003 GPR98Q8WXG9 6306 aa4.75□□□□□ -1.65
DDX49-201ENST00000247003 DSTQ03001 7570 aaKnown RBP4.66□□□□□ -1.66
DDX49-201ENST00000247003 SPRR2DP22532 72 aa4.61□□□□□ -1.67
DDX49-201ENST00000247003 KRTAP2-2Q9BYT5 123 aa4.59□□□□□ -1.67
DDX49-201ENST00000247003 MT1AP04731 61 aa4.51□□□□□ -1.69
DDX49-201ENST00000247003 LCE3BQ5TA77 95 aa4.5□□□□□ -1.69
DDX49-201ENST00000247003 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
DDX49-201ENST00000247003 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
DDX49-201ENST00000247003 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
DDX49-201ENST00000247003 KRTAP4-9Q9BYQ8 210 aa4.27□□□□□ -1.73
DDX49-201ENST00000247003 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
DDX49-201ENST00000247003 SYNE1Q8NF91 8797 aaKnown RBP4.23□□□□□ -1.73
DDX49-201ENST00000247003 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.74
DDX49-201ENST00000247003 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
DDX49-201ENST00000247003 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
DDX49-201ENST00000247003 AHNAK2Q8IVF2 5795 aa4.12□□□□□ -1.75
DDX49-201ENST00000247003 LCE4AQ5TA78 99 aa4.09□□□□□ -1.75
DDX49-201ENST00000247003 MT3P25713 68 aa4.09□□□□□ -1.76
DDX49-201ENST00000247003 KRTAP6-2Q3LI66 62 aa4.07□□□□□ -1.76
DDX49-201ENST00000247003 HMCN1Q96RW7 5635 aa4.05□□□□□ -1.76
DDX49-201ENST00000247003 KRTAP5-10Q6L8G5 202 aa4.05□□□□□ -1.76
DDX49-201ENST00000247003 MT4P47944 62 aa4□□□□□ -1.77
DDX49-201ENST00000247003 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
DDX49-201ENST00000247003 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
DDX49-201ENST00000247003 KRTAP4-6Q9BYQ5 205 aa3.95□□□□□ -1.78
DDX49-201ENST00000247003 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
DDX49-201ENST00000247003 PRM1P04553 51 aa3.8□□□□□ -1.8
DDX49-201ENST00000247003 KRTAP5-3Q6L8H2 238 aa3.78□□□□□ -1.8
DDX49-201ENST00000247003 KRTAP5-2Q701N4 177 aa3.75□□□□□ -1.81
DDX49-201ENST00000247003 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
DDX49-201ENST00000247003 AHNAKQ09666 5890 aaKnown RBP3.6□□□□□ -1.83
DDX49-201ENST00000247003 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
DDX49-201ENST00000247003 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.86
DDX49-201ENST00000247003 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
DDX49-201ENST00000247003 KRTAP4-11Q9BYQ6 195 aa3.4□□□□□ -1.86
DDX49-201ENST00000247003 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
DDX49-201ENST00000247003 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
DDX49-201ENST00000247003 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
DDX49-201ENST00000247003 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
DDX49-201ENST00000247003 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
DDX49-201ENST00000247003 KRTAP9-9Q9BYP9 154 aa3.14□□□□□ -1.91
DDX49-201ENST00000247003 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
DDX49-201ENST00000247003 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
DDX49-201ENST00000247003 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
DDX49-201ENST00000247003 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -1.99
DDX49-201ENST00000247003 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
DDX49-201ENST00000247003 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
DDX49-201ENST00000247003 PHGR1C9JFL3 82 aa2.4□□□□□ -2.03
DDX49-201ENST00000247003 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
DDX49-201ENST00000247003 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
DDX49-201ENST00000247003 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 75.9 ms