RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 LCE3CQ5T5A8 94 aa6.35□□□□□ -1.39
KLHDC3-201ENST00000244670 KRTAP4-7Q9BYR0 210 aa6.27□□□□□ -1.41
KLHDC3-201ENST00000244670 A0A0A0MQY5 61 aa6.24□□□□□ -1.41
KLHDC3-201ENST00000244670 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.21□□□□□ -1.41
KLHDC3-201ENST00000244670 KRTAP19-3Q7Z4W3 81 aa6.21□□□□□ -1.41
KLHDC3-201ENST00000244670 KRTAP5-9P26371 169 aa6.18□□□□□ -1.42
KLHDC3-201ENST00000244670 KRTAP19-4Q3LI73 84 aa6.16□□□□□ -1.42
KLHDC3-201ENST00000244670 MT1GP13640 62 aa6.13□□□□□ -1.43
KLHDC3-201ENST00000244670 MDN1Q9NU22 5596 aa6.13□□□□□ -1.43
KLHDC3-201ENST00000244670 MT1MQ8N339 61 aa6.11□□□□□ -1.43
KLHDC3-201ENST00000244670 KRTAP9-6A8MVA2 160 aa6.1□□□□□ -1.43
KLHDC3-201ENST00000244670 LCE5AQ5TCM9 118 aa6.09□□□□□ -1.44
KLHDC3-201ENST00000244670 KRTAP4-3Q9BYR4 195 aa6.07□□□□□ -1.44
KLHDC3-201ENST00000244670 KRTAP6-3Q3LI67 103 aa6.04□□□□□ -1.44
KLHDC3-201ENST00000244670 LCE1AQ5T7P2 110 aa6.03□□□□□ -1.44
KLHDC3-201ENST00000244670 SPRR2EP22531 72 aa6□□□□□ -1.45
KLHDC3-201ENST00000244670 SPRR2BP35325 72 aa6□□□□□ -1.45
KLHDC3-201ENST00000244670 SPRR2AP35326 72 aa6□□□□□ -1.45
KLHDC3-201ENST00000244670 DSTQ03001 7570 aaKnown RBP5.94□□□□□ -1.46
KLHDC3-201ENST00000244670 LOC100996750A0A140TA64 210 aa5.88□□□□□ -1.47
KLHDC3-201ENST00000244670 KRTAP9-7A8MTY7 169 aa5.84□□□□□ -1.47
KLHDC3-201ENST00000244670 SPRR2DP22532 72 aa5.77□□□□□ -1.49
KLHDC3-201ENST00000244670 NEBP20929 6669 aa5.73□□□□□ -1.49
KLHDC3-201ENST00000244670 INE1O15225 51 aa5.72□□□□□ -1.49
KLHDC3-201ENST00000244670 KRTAP2-3P0C7H8 128 aa5.7□□□□□ -1.5
KLHDC3-201ENST00000244670 KRTAP2-4Q9BYR9 128 aa5.7□□□□□ -1.5
KLHDC3-201ENST00000244670 KRTAP2-1Q9BYU5 128 aa5.7□□□□□ -1.5
KLHDC3-201ENST00000244670 LCE3BQ5TA77 95 aa5.53□□□□□ -1.52
KLHDC3-201ENST00000244670 KRTAP5-5Q701N2 237 aaPredicted RBP5.47□□□□□ -1.53
KLHDC3-201ENST00000244670 KRTAP6-1Q3LI64 71 aa5.39□□□□□ -1.55
KLHDC3-201ENST00000244670 MT1AP04731 61 aa5.38□□□□□ -1.55
KLHDC3-201ENST00000244670 SYNE1Q8NF91 8797 aaKnown RBP5.35□□□□□ -1.55
KLHDC3-201ENST00000244670 KRTAP20-1Q3LI63 56 aa5.18□□□□□ -1.58
KLHDC3-201ENST00000244670 KRTAP5-4Q6L8H1 288 aa5.17□□□□□ -1.58
KLHDC3-201ENST00000244670 KRTAP2-2Q9BYT5 123 aa5.17□□□□□ -1.58
KLHDC3-201ENST00000244670 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
KLHDC3-201ENST00000244670 MT4P47944 62 aa5.06□□□□□ -1.6
KLHDC3-201ENST00000244670 KRTAP12-4P60329 112 aa5.06□□□□□ -1.6
KLHDC3-201ENST00000244670 LCE4AQ5TA78 99 aa5.05□□□□□ -1.6
KLHDC3-201ENST00000244670 KRTAP4-9Q9BYQ8 210 aa5.04□□□□□ -1.6
KLHDC3-201ENST00000244670 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
KLHDC3-201ENST00000244670 KRTAP6-2Q3LI66 62 aa4.96□□□□□ -1.62
KLHDC3-201ENST00000244670 HMCN1Q96RW7 5635 aa4.92□□□□□ -1.62
KLHDC3-201ENST00000244670 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
KLHDC3-201ENST00000244670 KRTAP20-2Q3LI61 65 aa4.87□□□□□ -1.63
KLHDC3-201ENST00000244670 MT3P25713 68 aa4.87□□□□□ -1.63
KLHDC3-201ENST00000244670 LCE3DQ9BYE3 92 aa4.82□□□□□ -1.64
KLHDC3-201ENST00000244670 LCE3EQ5T5B0 92 aa4.72□□□□□ -1.65
KLHDC3-201ENST00000244670 KRTAP5-2Q701N4 177 aa4.7□□□□□ -1.66
KLHDC3-201ENST00000244670 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
KLHDC3-201ENST00000244670 KRTAP5-3Q6L8H2 238 aa4.68□□□□□ -1.66
KLHDC3-201ENST00000244670 PRM1P04553 51 aa4.36□□□□□ -1.71
KLHDC3-201ENST00000244670 AHNAK2Q8IVF2 5795 aa4.3□□□□□ -1.72
KLHDC3-201ENST00000244670 KRTAP4-11Q9BYQ6 195 aa4.21□□□□□ -1.74
KLHDC3-201ENST00000244670 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
KLHDC3-201ENST00000244670 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.76
KLHDC3-201ENST00000244670 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
KLHDC3-201ENST00000244670 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.76
KLHDC3-201ENST00000244670 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
KLHDC3-201ENST00000244670 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
KLHDC3-201ENST00000244670 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
KLHDC3-201ENST00000244670 LCE1CQ5T751 118 aa3.9□□□□□ -1.78
KLHDC3-201ENST00000244670 KRTAP5-7Q6L8G8 165 aa3.87□□□□□ -1.79
KLHDC3-201ENST00000244670 GPR98Q8WXG9 6306 aa3.86□□□□□ -1.79
KLHDC3-201ENST00000244670 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
KLHDC3-201ENST00000244670 KRTAP9-9Q9BYP9 154 aa3.62□□□□□ -1.83
KLHDC3-201ENST00000244670 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
KLHDC3-201ENST00000244670 KRTAP21-2Q3LI59 83 aa3.51□□□□□ -1.85
KLHDC3-201ENST00000244670 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
KLHDC3-201ENST00000244670 KRTAP4-12Q9BQ66 201 aa3.34□□□□□ -1.87
KLHDC3-201ENST00000244670 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
KLHDC3-201ENST00000244670 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
KLHDC3-201ENST00000244670 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
KLHDC3-201ENST00000244670 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
KLHDC3-201ENST00000244670 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
KLHDC3-201ENST00000244670 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
KLHDC3-201ENST00000244670 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 174.8 ms