RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 FCGBPQ9Y6R7 5405 aaPredicted RBP5.12□□□□□ -1.59
SNRNP27-201ENST00000244227 KRTAP19-7Q3SYF9 63 aa5.09□□□□□ -1.6
SNRNP27-201ENST00000244227 SPRR5A0A1B0GTR4 108 aa5.05□□□□□ -1.6
SNRNP27-201ENST00000244227 MT1EP04732 61 aa4.97□□□□□ -1.61
SNRNP27-201ENST00000244227 CRCT1Q9UGL9 99 aa4.96□□□□□ -1.62
SNRNP27-201ENST00000244227 NDUFAF8A1L188 74 aa4.89□□□□□ -1.63
SNRNP27-201ENST00000244227 MT1LQ93083 61 aa4.89□□□□□ -1.63
SNRNP27-201ENST00000244227 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
SNRNP27-201ENST00000244227 MACF1Q9UPN3 7388 aaKnown RBP4.88□□□□□ -1.63
SNRNP27-201ENST00000244227 LUZP6Q538Z0 58 aa4.84□□□□□ -1.63
SNRNP27-201ENST00000244227 KRTAP19-4Q3LI73 84 aa4.81□□□□□ -1.64
SNRNP27-201ENST00000244227 MUC12Q9UKN1 5478 aa4.78□□□□□ -1.64
SNRNP27-201ENST00000244227 LCE4AQ5TA78 99 aa4.76□□□□□ -1.65
SNRNP27-201ENST00000244227 SPRR2FQ96RM1 72 aa4.75□□□□□ -1.65
SNRNP27-201ENST00000244227 KRTAP19-3Q7Z4W3 81 aa4.74□□□□□ -1.65
SNRNP27-201ENST00000244227 LCE5AQ5TCM9 118 aa4.7□□□□□ -1.66
SNRNP27-201ENST00000244227 SYNE2Q8WXH0 6885 aaKnown RBP4.7□□□□□ -1.66
SNRNP27-201ENST00000244227 MT1GP13640 62 aa4.69□□□□□ -1.66
SNRNP27-201ENST00000244227 KRTAP9-6A8MVA2 160 aa4.69□□□□□ -1.66
SNRNP27-201ENST00000244227 KRTAP5-9P26371 169 aa4.68□□□□□ -1.66
SNRNP27-201ENST00000244227 MT1MQ8N339 61 aa4.66□□□□□ -1.66
SNRNP27-201ENST00000244227 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
SNRNP27-201ENST00000244227 LCE1AQ5T7P2 110 aa4.56□□□□□ -1.68
SNRNP27-201ENST00000244227 KRTAP9-7A8MTY7 169 aa4.53□□□□□ -1.68
SNRNP27-201ENST00000244227 MDN1Q9NU22 5596 aa4.53□□□□□ -1.68
SNRNP27-201ENST00000244227 KRTAP6-3Q3LI67 103 aa4.51□□□□□ -1.69
SNRNP27-201ENST00000244227 H3BS24 57 aa4.48□□□□□ -1.69
SNRNP27-201ENST00000244227 SPRR2EP22531 72 aa4.46□□□□□ -1.69
SNRNP27-201ENST00000244227 SPRR2BP35325 72 aa4.46□□□□□ -1.69
SNRNP27-201ENST00000244227 SPRR2AP35326 72 aa4.46□□□□□ -1.69
SNRNP27-201ENST00000244227 DSTQ03001 7570 aaKnown RBP4.4□□□□□ -1.7
SNRNP27-201ENST00000244227 KRTAP2-3P0C7H8 128 aa4.35□□□□□ -1.71
SNRNP27-201ENST00000244227 KRTAP2-4Q9BYR9 128 aa4.35□□□□□ -1.71
SNRNP27-201ENST00000244227 KRTAP2-1Q9BYU5 128 aa4.35□□□□□ -1.71
SNRNP27-201ENST00000244227 SPRR2DP22532 72 aa4.3□□□□□ -1.72
SNRNP27-201ENST00000244227 A0A0A0MQY5 61 aa4.25□□□□□ -1.73
SNRNP27-201ENST00000244227 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
SNRNP27-201ENST00000244227 NEBP20929 6669 aa4.2□□□□□ -1.74
SNRNP27-201ENST00000244227 MT1AP04731 61 aa4.14□□□□□ -1.75
SNRNP27-201ENST00000244227 KRTAP6-1Q3LI64 71 aa4.13□□□□□ -1.75
SNRNP27-201ENST00000244227 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
SNRNP27-201ENST00000244227 INE1O15225 51 aa3.99□□□□□ -1.77
SNRNP27-201ENST00000244227 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
SNRNP27-201ENST00000244227 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.79
SNRNP27-201ENST00000244227 KRTAP12-4P60329 112 aa3.81□□□□□ -1.8
SNRNP27-201ENST00000244227 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
SNRNP27-201ENST00000244227 KRTAP20-1Q3LI63 56 aa3.79□□□□□ -1.8
SNRNP27-201ENST00000244227 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
SNRNP27-201ENST00000244227 MT4P47944 62 aa3.74□□□□□ -1.81
SNRNP27-201ENST00000244227 MT3P25713 68 aa3.72□□□□□ -1.81
SNRNP27-201ENST00000244227 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
SNRNP27-201ENST00000244227 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
SNRNP27-201ENST00000244227 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
SNRNP27-201ENST00000244227 KRTAP5-2Q701N4 177 aa3.61□□□□□ -1.83
SNRNP27-201ENST00000244227 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.83
SNRNP27-201ENST00000244227 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
SNRNP27-201ENST00000244227 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
SNRNP27-201ENST00000244227 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
SNRNP27-201ENST00000244227 PRM1P04553 51 aa3.21□□□□□ -1.9
SNRNP27-201ENST00000244227 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
SNRNP27-201ENST00000244227 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
SNRNP27-201ENST00000244227 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
SNRNP27-201ENST00000244227 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
SNRNP27-201ENST00000244227 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
SNRNP27-201ENST00000244227 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
SNRNP27-201ENST00000244227 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.93
SNRNP27-201ENST00000244227 LCE1CQ5T751 118 aa3□□□□□ -1.93
SNRNP27-201ENST00000244227 KRTAP5-7Q6L8G8 165 aa2.97□□□□□ -1.93
SNRNP27-201ENST00000244227 GPR98Q8WXG9 6306 aa2.75□□□□□ -1.97
SNRNP27-201ENST00000244227 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
SNRNP27-201ENST00000244227 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -1.99
SNRNP27-201ENST00000244227 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
SNRNP27-201ENST00000244227 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
SNRNP27-201ENST00000244227 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
SNRNP27-201ENST00000244227 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
SNRNP27-201ENST00000244227 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
SNRNP27-201ENST00000244227 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 85.4 ms