RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 NEBP20929 6669 aa7.31□□□□□ -1.24
SNRPA-201ENST00000243563 PP632Q6XCG6 107 aa7.23□□□□□ -1.25
SNRPA-201ENST00000243563 MT1LQ93083 61 aa7.21□□□□□ -1.26
SNRPA-201ENST00000243563 KRTAP19-3Q7Z4W3 81 aa7.2□□□□□ -1.26
SNRPA-201ENST00000243563 LCE5AQ5TCM9 118 aa7.16□□□□□ -1.26
SNRPA-201ENST00000243563 PRAC1Q96KF2 57 aa7.16□□□□□ -1.26
SNRPA-201ENST00000243563 MT1GP13640 62 aa7.07□□□□□ -1.28
SNRPA-201ENST00000243563 SPRR2DP22532 72 aa7.07□□□□□ -1.28
SNRPA-201ENST00000243563 KRTAP15-1Q3LI76 137 aa7.04□□□□□ -1.28
SNRPA-201ENST00000243563 MT1MQ8N339 61 aa7.03□□□□□ -1.28
SNRPA-201ENST00000243563 KTN1-AS1Q86SY8 53 aa7□□□□□ -1.29
SNRPA-201ENST00000243563 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
SNRPA-201ENST00000243563 KRTAP4-3Q9BYR4 195 aa6.94□□□□□ -1.3
SNRPA-201ENST00000243563 KRTAP20-1Q3LI63 56 aa6.86□□□□□ -1.31
SNRPA-201ENST00000243563 KRTAP2-3P0C7H8 128 aa6.83□□□□□ -1.32
SNRPA-201ENST00000243563 LCE3BQ5TA77 95 aa6.83□□□□□ -1.32
SNRPA-201ENST00000243563 KRTAP2-4Q9BYR9 128 aa6.83□□□□□ -1.32
SNRPA-201ENST00000243563 LCE3CQ5T5A8 94 aa6.81□□□□□ -1.32
SNRPA-201ENST00000243563 DSTQ03001 7570 aaKnown RBP6.8□□□□□ -1.32
SNRPA-201ENST00000243563 KRTAP19-4Q3LI73 84 aa6.76□□□□□ -1.33
SNRPA-201ENST00000243563 KRTAP2-2Q9BYT5 123 aa6.65□□□□□ -1.35
SNRPA-201ENST00000243563 KRTAP2-1Q9BYU5 128 aa6.65□□□□□ -1.35
SNRPA-201ENST00000243563 LOC100996750A0A140TA64 210 aa6.58□□□□□ -1.36
SNRPA-201ENST00000243563 KRTAP9-6A8MVA2 160 aa6.54□□□□□ -1.36
SNRPA-201ENST00000243563 H3BS24 57 aa6.53□□□□□ -1.36
SNRPA-201ENST00000243563 KRTAP5-5Q701N2 237 aaPredicted RBP6.4□□□□□ -1.38
SNRPA-201ENST00000243563 KRTAP4-6Q9BYQ5 205 aa6.34□□□□□ -1.39
SNRPA-201ENST00000243563 SPRR5A0A1B0GTR4 108 aa6.33□□□□□ -1.4
SNRPA-201ENST00000243563 KRTAP5-4Q6L8H1 288 aa6.31□□□□□ -1.4
SNRPA-201ENST00000243563 A0A0A0MQY5 61 aa6.28□□□□□ -1.4
SNRPA-201ENST00000243563 KRTAP4-9Q9BYQ8 210 aa6.26□□□□□ -1.41
SNRPA-201ENST00000243563 LCE4AQ5TA78 99 aa6.24□□□□□ -1.41
SNRPA-201ENST00000243563 MT4P47944 62 aa6.17□□□□□ -1.42
SNRPA-201ENST00000243563 LCE1DQ5T752 114 aa6.16□□□□□ -1.42
SNRPA-201ENST00000243563 MT1AP04731 61 aa6.11□□□□□ -1.43
SNRPA-201ENST00000243563 KRTAP6-1Q3LI64 71 aa6.1□□□□□ -1.43
SNRPA-201ENST00000243563 SYNE1Q8NF91 8797 aaKnown RBP6.08□□□□□ -1.44
SNRPA-201ENST00000243563 HMCN1Q96RW7 5635 aa6.03□□□□□ -1.44
SNRPA-201ENST00000243563 KRTAP12-4P60329 112 aa5.95□□□□□ -1.46
SNRPA-201ENST00000243563 KRTAP20-2Q3LI61 65 aa5.92□□□□□ -1.46
SNRPA-201ENST00000243563 KRTAP9-4Q9BYQ2 154 aa5.85□□□□□ -1.47
SNRPA-201ENST00000243563 KRTAP5-3Q6L8H2 238 aa5.74□□□□□ -1.49
SNRPA-201ENST00000243563 LUZP6Q538Z0 58 aa5.71□□□□□ -1.5
SNRPA-201ENST00000243563 KRTAP6-2Q3LI66 62 aa5.69□□□□□ -1.5
SNRPA-201ENST00000243563 KRTAP5-2Q701N4 177 aa5.66□□□□□ -1.5
SNRPA-201ENST00000243563 AHNAK2Q8IVF2 5795 aa5.57□□□□□ -1.52
SNRPA-201ENST00000243563 MT3P25713 68 aa5.52□□□□□ -1.53
SNRPA-201ENST00000243563 KRTAP4-12Q9BQ66 201 aa5.45□□□□□ -1.54
SNRPA-201ENST00000243563 KRTAP5-10Q6L8G5 202 aa5.38□□□□□ -1.55
SNRPA-201ENST00000243563 NDUFAF8A1L188 74 aa5.37□□□□□ -1.55
SNRPA-201ENST00000243563 KRTAP9-9Q9BYP9 154 aa5.36□□□□□ -1.55
SNRPA-201ENST00000243563 GPR98Q8WXG9 6306 aa5.35□□□□□ -1.55
SNRPA-201ENST00000243563 KRTAP4-11Q9BYQ6 195 aa5.23□□□□□ -1.57
SNRPA-201ENST00000243563 OBSCNQ5VST9 7968 aa5.21□□□□□ -1.57
SNRPA-201ENST00000243563 KRTAP5-8O75690 187 aa5.08□□□□□ -1.6
SNRPA-201ENST00000243563 KRTAP5-7Q6L8G8 165 aa5.04□□□□□ -1.6
SNRPA-201ENST00000243563 LCE3DQ9BYE3 92 aa5.01□□□□□ -1.61
SNRPA-201ENST00000243563 KRTAP5-1Q6L8H4 278 aa4.97□□□□□ -1.61
SNRPA-201ENST00000243563 KRTAP4-2Q9BYR5 136 aa4.92□□□□□ -1.62
SNRPA-201ENST00000243563 LCE1EQ5T753 118 aa4.9□□□□□ -1.63
SNRPA-201ENST00000243563 LCE3EQ5T5B0 92 aa4.81□□□□□ -1.64
SNRPA-201ENST00000243563 MUC5ACP98088 5654 aa4.77□□□□□ -1.65
SNRPA-201ENST00000243563 LCE1BQ5T7P3 118 aa4.64□□□□□ -1.67
SNRPA-201ENST00000243563 LCE1CQ5T751 118 aa4.57□□□□□ -1.68
SNRPA-201ENST00000243563 MUC5BQ9HC84 5762 aaPredicted RBP4.46□□□□□ -1.7
SNRPA-201ENST00000243563 AHNAKQ09666 5890 aaKnown RBP4.32□□□□□ -1.72
SNRPA-201ENST00000243563 INE1O15225 51 aa4.31□□□□□ -1.72
SNRPA-201ENST00000243563 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
SNRPA-201ENST00000243563 KRTAP5-11Q6L8G4 156 aa4.09□□□□□ -1.76
SNRPA-201ENST00000243563 PRM1P04553 51 aa4.03□□□□□ -1.76
SNRPA-201ENST00000243563 KRTAP21-2Q3LI59 83 aa4.01□□□□□ -1.77
SNRPA-201ENST00000243563 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
SNRPA-201ENST00000243563 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
SNRPA-201ENST00000243563 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
SNRPA-201ENST00000243563 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
SNRPA-201ENST00000243563 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
SNRPA-201ENST00000243563 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 71 ms