RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 SPRR2AP35326 72 aa6.89□□□□□ -1.31
HOXC6-201ENST00000243108 KRTAP10-7P60409 375 aaPredicted RBP6.87□□□□□ -1.31
HOXC6-201ENST00000243108 LCE1AQ5T7P2 110 aa6.83□□□□□ -1.32
HOXC6-201ENST00000243108 KRTAP2-3P0C7H8 128 aa6.82□□□□□ -1.32
HOXC6-201ENST00000243108 KRTAP2-4Q9BYR9 128 aa6.82□□□□□ -1.32
HOXC6-201ENST00000243108 KRTAP10-12P60413 245 aa6.8□□□□□ -1.32
HOXC6-201ENST00000243108 LCE3AQ5TA76 89 aa6.76□□□□□ -1.33
HOXC6-201ENST00000243108 SPRR2DP22532 72 aa6.65□□□□□ -1.34
HOXC6-201ENST00000243108 KRTAP15-1Q3LI76 137 aa6.64□□□□□ -1.35
HOXC6-201ENST00000243108 KRTAP2-2Q9BYT5 123 aa6.61□□□□□ -1.35
HOXC6-201ENST00000243108 KRTAP2-1Q9BYU5 128 aa6.61□□□□□ -1.35
HOXC6-201ENST00000243108 KRTAP12-3P60328 96 aa6.48□□□□□ -1.37
HOXC6-201ENST00000243108 LCE3BQ5TA77 95 aa6.48□□□□□ -1.37
HOXC6-201ENST00000243108 KRTAP19-7Q3SYF9 63 aa6.43□□□□□ -1.38
HOXC6-201ENST00000243108 KRTAP4-12Q9BQ66 201 aa6.41□□□□□ -1.38
HOXC6-201ENST00000243108 KRTAP19-5Q3LI72 72 aa6.38□□□□□ -1.39
HOXC6-201ENST00000243108 DSTQ03001 7570 aaKnown RBP6.36□□□□□ -1.39
HOXC6-201ENST00000243108 MT1EP04732 61 aa6.36□□□□□ -1.39
HOXC6-201ENST00000243108 SPRR5A0A1B0GTR4 108 aa6.35□□□□□ -1.39
HOXC6-201ENST00000243108 LCE5AQ5TCM9 118 aa6.34□□□□□ -1.39
HOXC6-201ENST00000243108 KRTAP19-3Q7Z4W3 81 aa6.29□□□□□ -1.4
HOXC6-201ENST00000243108 NDUFAF8A1L188 74 aa6.18□□□□□ -1.42
HOXC6-201ENST00000243108 LUZP6Q538Z0 58 aa6.15□□□□□ -1.42
HOXC6-201ENST00000243108 KRTAP9-9Q9BYP9 154 aa6.14□□□□□ -1.43
HOXC6-201ENST00000243108 KRTAP9-4Q9BYQ2 154 aa6.14□□□□□ -1.43
HOXC6-201ENST00000243108 MT1GP13640 62 aa6.12□□□□□ -1.43
HOXC6-201ENST00000243108 KRTAP4-9Q9BYQ8 210 aa6.1□□□□□ -1.43
HOXC6-201ENST00000243108 LCE3CQ5T5A8 94 aa6.08□□□□□ -1.44
HOXC6-201ENST00000243108 KRTAP19-4Q3LI73 84 aa6.07□□□□□ -1.44
HOXC6-201ENST00000243108 MT1LQ93083 61 aa6.07□□□□□ -1.44
HOXC6-201ENST00000243108 MT1MQ8N339 61 aa6.05□□□□□ -1.44
HOXC6-201ENST00000243108 KRTAP4-3Q9BYR4 195 aa5.97□□□□□ -1.45
HOXC6-201ENST00000243108 GPR98Q8WXG9 6306 aa5.94□□□□□ -1.46
HOXC6-201ENST00000243108 LCE1DQ5T752 114 aa5.94□□□□□ -1.46
HOXC6-201ENST00000243108 LCE4AQ5TA78 99 aa5.91□□□□□ -1.46
HOXC6-201ENST00000243108 KRTAP4-7Q9BYR0 210 aa5.88□□□□□ -1.47
HOXC6-201ENST00000243108 HMCN1Q96RW7 5635 aa5.86□□□□□ -1.47
HOXC6-201ENST00000243108 MT4P47944 62 aa5.85□□□□□ -1.47
HOXC6-201ENST00000243108 KRTAP5-4Q6L8H1 288 aa5.8□□□□□ -1.48
HOXC6-201ENST00000243108 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
HOXC6-201ENST00000243108 AHNAK2Q8IVF2 5795 aa5.64□□□□□ -1.51
HOXC6-201ENST00000243108 KRTAP5-5Q701N2 237 aaPredicted RBP5.58□□□□□ -1.52
HOXC6-201ENST00000243108 KRTAP5-10Q6L8G5 202 aa5.54□□□□□ -1.52
HOXC6-201ENST00000243108 KRTAP4-2Q9BYR5 136 aa5.53□□□□□ -1.52
HOXC6-201ENST00000243108 KRTAP4-11Q9BYQ6 195 aa5.52□□□□□ -1.53
HOXC6-201ENST00000243108 KRTAP20-2Q3LI61 65 aa5.48□□□□□ -1.53
HOXC6-201ENST00000243108 SYNE1Q8NF91 8797 aaKnown RBP5.41□□□□□ -1.54
HOXC6-201ENST00000243108 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
HOXC6-201ENST00000243108 KRTAP12-4P60329 112 aa5.35□□□□□ -1.55
HOXC6-201ENST00000243108 KRTAP5-7Q6L8G8 165 aa5.3□□□□□ -1.56
HOXC6-201ENST00000243108 KRTAP6-1Q3LI64 71 aa5.15□□□□□ -1.58
HOXC6-201ENST00000243108 MT1AP04731 61 aa5.13□□□□□ -1.59
HOXC6-201ENST00000243108 INE1O15225 51 aa5.11□□□□□ -1.59
HOXC6-201ENST00000243108 KRTAP5-2Q701N4 177 aa5.09□□□□□ -1.6
HOXC6-201ENST00000243108 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
HOXC6-201ENST00000243108 OBSCNQ5VST9 7968 aa4.86□□□□□ -1.63
HOXC6-201ENST00000243108 KRTAP5-8O75690 187 aa4.86□□□□□ -1.63
HOXC6-201ENST00000243108 MT3P25713 68 aa4.67□□□□□ -1.66
HOXC6-201ENST00000243108 MUC5BQ9HC84 5762 aaPredicted RBP4.64□□□□□ -1.67
HOXC6-201ENST00000243108 MUC5ACP98088 5654 aa4.62□□□□□ -1.67
HOXC6-201ENST00000243108 AHNAKQ09666 5890 aaKnown RBP4.6□□□□□ -1.67
HOXC6-201ENST00000243108 LCE3DQ9BYE3 92 aa4.59□□□□□ -1.67
HOXC6-201ENST00000243108 KRTAP5-1Q6L8H4 278 aa4.58□□□□□ -1.68
HOXC6-201ENST00000243108 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
HOXC6-201ENST00000243108 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
HOXC6-201ENST00000243108 LCE1BQ5T7P3 118 aa4.08□□□□□ -1.76
HOXC6-201ENST00000243108 LCE1CQ5T751 118 aa4.01□□□□□ -1.77
HOXC6-201ENST00000243108 PRM1P04553 51 aa4.01□□□□□ -1.77
HOXC6-201ENST00000243108 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
HOXC6-201ENST00000243108 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
HOXC6-201ENST00000243108 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
HOXC6-201ENST00000243108 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
HOXC6-201ENST00000243108 PHGR1C9JFL3 82 aa3.19□□□□□ -1.9
HOXC6-201ENST00000243108 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
HOXC6-201ENST00000243108 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
HOXC6-201ENST00000243108 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
HOXC6-201ENST00000243108 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 114.2 ms