RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 KRTAP19-5Q3LI72 72 aa7.03□□□□□ -1.28
HOXC13-201ENST00000243056 MUC12Q9UKN1 5478 aa7.03□□□□□ -1.28
HOXC13-201ENST00000243056 KRTAP9-6A0A140TA67 174 aa6.98□□□□□ -1.29
HOXC13-201ENST00000243056 KRTAP19-7Q3SYF9 63 aa6.93□□□□□ -1.3
HOXC13-201ENST00000243056 MDN1Q9NU22 5596 aa6.81□□□□□ -1.32
HOXC13-201ENST00000243056 SPRR2FQ96RM1 72 aa6.78□□□□□ -1.32
HOXC13-201ENST00000243056 MT1EP04732 61 aa6.77□□□□□ -1.33
HOXC13-201ENST00000243056 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.76□□□□□ -1.33
HOXC13-201ENST00000243056 KRTAP4-7Q9BYR0 210 aa6.71□□□□□ -1.33
HOXC13-201ENST00000243056 DSTQ03001 7570 aaKnown RBP6.67□□□□□ -1.34
HOXC13-201ENST00000243056 MT1LQ93083 61 aa6.63□□□□□ -1.35
HOXC13-201ENST00000243056 KRTAP5-9P26371 169 aa6.56□□□□□ -1.36
HOXC13-201ENST00000243056 KRTAP12-4P60329 112 aa6.53□□□□□ -1.36
HOXC13-201ENST00000243056 KRTAP4-3Q9BYR4 195 aa6.49□□□□□ -1.37
HOXC13-201ENST00000243056 KRTAP19-3Q7Z4W3 81 aa6.49□□□□□ -1.37
HOXC13-201ENST00000243056 KRTAP6-3Q3LI67 103 aa6.45□□□□□ -1.38
HOXC13-201ENST00000243056 LCE1AQ5T7P2 110 aa6.44□□□□□ -1.38
HOXC13-201ENST00000243056 KRTAP9-7A8MTY7 169 aa6.41□□□□□ -1.38
HOXC13-201ENST00000243056 SPRR2EP22531 72 aa6.4□□□□□ -1.38
HOXC13-201ENST00000243056 SPRR2BP35325 72 aa6.4□□□□□ -1.38
HOXC13-201ENST00000243056 SPRR2AP35326 72 aa6.4□□□□□ -1.38
HOXC13-201ENST00000243056 LCE5AQ5TCM9 118 aa6.39□□□□□ -1.39
HOXC13-201ENST00000243056 MT1MQ8N339 61 aa6.38□□□□□ -1.39
HOXC13-201ENST00000243056 MT1GP13640 62 aa6.38□□□□□ -1.39
HOXC13-201ENST00000243056 LOC100996750A0A140TA64 210 aa6.25□□□□□ -1.41
HOXC13-201ENST00000243056 NEBP20929 6669 aa6.2□□□□□ -1.42
HOXC13-201ENST00000243056 KRTAP19-4Q3LI73 84 aa6.18□□□□□ -1.42
HOXC13-201ENST00000243056 SPRR2DP22532 72 aa6.15□□□□□ -1.43
HOXC13-201ENST00000243056 PRM1P04553 51 aa5.94□□□□□ -1.46
HOXC13-201ENST00000243056 KRTAP4-9Q9BYQ8 210 aa5.94□□□□□ -1.46
HOXC13-201ENST00000243056 LCE3BQ5TA77 95 aa5.9□□□□□ -1.46
HOXC13-201ENST00000243056 KRTAP2-2Q9BYT5 123 aa5.88□□□□□ -1.47
HOXC13-201ENST00000243056 KRTAP5-5Q701N2 237 aaPredicted RBP5.85□□□□□ -1.47
HOXC13-201ENST00000243056 SYNE1Q8NF91 8797 aaKnown RBP5.85□□□□□ -1.47
HOXC13-201ENST00000243056 MT1AP04731 61 aa5.68□□□□□ -1.5
HOXC13-201ENST00000243056 KRTAP6-1Q3LI64 71 aa5.67□□□□□ -1.5
HOXC13-201ENST00000243056 LCE3EQ5T5B0 92 aa5.66□□□□□ -1.5
HOXC13-201ENST00000243056 LCE3DQ9BYE3 92 aa5.66□□□□□ -1.5
HOXC13-201ENST00000243056 KRTAP20-1Q3LI63 56 aa5.62□□□□□ -1.51
HOXC13-201ENST00000243056 OBSCNQ5VST9 7968 aa5.49□□□□□ -1.53
HOXC13-201ENST00000243056 MT4P47944 62 aa5.48□□□□□ -1.53
HOXC13-201ENST00000243056 LCE1EQ5T753 118 aa5.46□□□□□ -1.53
HOXC13-201ENST00000243056 KRTAP6-2Q3LI66 62 aa5.46□□□□□ -1.54
HOXC13-201ENST00000243056 KRTAP5-4Q6L8H1 288 aa5.44□□□□□ -1.54
HOXC13-201ENST00000243056 KRTAP4-6Q9BYQ5 205 aa5.43□□□□□ -1.54
HOXC13-201ENST00000243056 HMCN1Q96RW7 5635 aa5.39□□□□□ -1.55
HOXC13-201ENST00000243056 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
HOXC13-201ENST00000243056 KRTAP9-4Q9BYQ2 154 aa5.31□□□□□ -1.56
HOXC13-201ENST00000243056 LCE4AQ5TA78 99 aa5.28□□□□□ -1.56
HOXC13-201ENST00000243056 KRTAP20-2Q3LI61 65 aa5.17□□□□□ -1.58
HOXC13-201ENST00000243056 MT3P25713 68 aa5.02□□□□□ -1.61
HOXC13-201ENST00000243056 KRTAP5-3Q6L8H2 238 aa4.96□□□□□ -1.61
HOXC13-201ENST00000243056 KRTAP5-2Q701N4 177 aa4.92□□□□□ -1.62
HOXC13-201ENST00000243056 AHNAK2Q8IVF2 5795 aa4.7□□□□□ -1.66
HOXC13-201ENST00000243056 LCE1FQ5T754 118 aa4.56□□□□□ -1.68
HOXC13-201ENST00000243056 KRTAP4-11Q9BYQ6 195 aa4.51□□□□□ -1.69
HOXC13-201ENST00000243056 KRTAP5-10Q6L8G5 202 aa4.37□□□□□ -1.71
HOXC13-201ENST00000243056 KRTAP5-1Q6L8H4 278 aa4.35□□□□□ -1.71
HOXC13-201ENST00000243056 KRTAP5-8O75690 187 aa4.34□□□□□ -1.71
HOXC13-201ENST00000243056 GPR98Q8WXG9 6306 aa4.32□□□□□ -1.72
HOXC13-201ENST00000243056 MUC5ACP98088 5654 aa4.31□□□□□ -1.72
HOXC13-201ENST00000243056 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
HOXC13-201ENST00000243056 KRTAP4-2Q9BYR5 136 aa4.16□□□□□ -1.74
HOXC13-201ENST00000243056 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
HOXC13-201ENST00000243056 MUC5BQ9HC84 5762 aaPredicted RBP4.04□□□□□ -1.76
HOXC13-201ENST00000243056 KRTAP5-7Q6L8G8 165 aa4.03□□□□□ -1.76
HOXC13-201ENST00000243056 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
HOXC13-201ENST00000243056 MUC19Q7Z5P9 8384 aa3.86□□□□□ -1.79
HOXC13-201ENST00000243056 KRTAP21-1Q3LI58 79 aa3.81□□□□□ -1.8
HOXC13-201ENST00000243056 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.72□□□□□ -1.81
HOXC13-201ENST00000243056 KRTAP4-12Q9BQ66 201 aa3.68□□□□□ -1.82
HOXC13-201ENST00000243056 KRTAP21-2Q3LI59 83 aa3.67□□□□□ -1.82
HOXC13-201ENST00000243056 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
HOXC13-201ENST00000243056 AHNAKQ09666 5890 aaKnown RBP3.49□□□□□ -1.85
HOXC13-201ENST00000243056 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
HOXC13-201ENST00000243056 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
HOXC13-201ENST00000243056 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms