RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 LCE3BQ5TA77 95 aa3.87□□□□□ -1.79
PFDN5-201ENST00000243040 A6NED7 52 aa3.83□□□□□ -1.8
PFDN5-201ENST00000243040 MT1GP13640 62 aa3.82□□□□□ -1.8
PFDN5-201ENST00000243040 KRTAP25-1Q3LHN0 102 aa3.81□□□□□ -1.8
PFDN5-201ENST00000243040 MT1LQ93083 61 aa3.8□□□□□ -1.8
PFDN5-201ENST00000243040 DSTQ03001 7570 aaKnown RBP3.8□□□□□ -1.8
PFDN5-201ENST00000243040 PP632Q6XCG6 107 aa3.78□□□□□ -1.8
PFDN5-201ENST00000243040 MT1MQ8N339 61 aa3.75□□□□□ -1.81
PFDN5-201ENST00000243040 KRTAP12-3P60328 96 aa3.74□□□□□ -1.81
PFDN5-201ENST00000243040 CDC42SE1Q9NRR8 79 aa3.71□□□□□ -1.82
PFDN5-201ENST00000243040 KRTAP23-1A1A580 65 aa3.7□□□□□ -1.82
PFDN5-201ENST00000243040 ROMO1P60602 79 aa3.63□□□□□ -1.83
PFDN5-201ENST00000243040 KRTAP4-3Q9BYR4 195 aa3.62□□□□□ -1.83
PFDN5-201ENST00000243040 KRTAP19-4Q3LI73 84 aa3.59□□□□□ -1.83
PFDN5-201ENST00000243040 KRTAP4-7Q9BYR0 210 aa3.59□□□□□ -1.83
PFDN5-201ENST00000243040 LCE4AQ5TA78 99 aa3.55□□□□□ -1.84
PFDN5-201ENST00000243040 KRTAP15-1Q3LI76 137 aa3.54□□□□□ -1.84
PFDN5-201ENST00000243040 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
PFDN5-201ENST00000243040 KRTAP4-9Q9BYQ8 210 aa3.53□□□□□ -1.84
PFDN5-201ENST00000243040 LCE1DQ5T752 114 aa3.5□□□□□ -1.85
PFDN5-201ENST00000243040 LCE3CQ5T5A8 94 aa3.46□□□□□ -1.86
PFDN5-201ENST00000243040 KRTAP5-5Q701N2 237 aaPredicted RBP3.46□□□□□ -1.86
PFDN5-201ENST00000243040 HMCN1Q96RW7 5635 aa3.46□□□□□ -1.86
PFDN5-201ENST00000243040 MT4P47944 62 aa3.45□□□□□ -1.86
PFDN5-201ENST00000243040 BRK1Q8WUW1 75 aa3.42□□□□□ -1.86
PFDN5-201ENST00000243040 LOC100996750A0A140TA64 210 aa3.39□□□□□ -1.87
PFDN5-201ENST00000243040 KRTAP4-6Q9BYQ5 205 aa3.38□□□□□ -1.87
PFDN5-201ENST00000243040 SYNE1Q8NF91 8797 aaKnown RBP3.35□□□□□ -1.87
PFDN5-201ENST00000243040 GPR98Q8WXG9 6306 aa3.32□□□□□ -1.88
PFDN5-201ENST00000243040 SPRR5A0A1B0GTR4 108 aa3.31□□□□□ -1.88
PFDN5-201ENST00000243040 AHNAK2Q8IVF2 5795 aa3.3□□□□□ -1.88
PFDN5-201ENST00000243040 KRTAP20-2Q3LI61 65 aa3.3□□□□□ -1.88
PFDN5-201ENST00000243040 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
PFDN5-201ENST00000243040 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
PFDN5-201ENST00000243040 MT1AP04731 61 aa3.24□□□□□ -1.89
PFDN5-201ENST00000243040 PMAIP1Q13794 54 aa3.21□□□□□ -1.9
PFDN5-201ENST00000243040 KRTAP5-3Q6L8H2 238 aa3.21□□□□□ -1.9
PFDN5-201ENST00000243040 PRO0628Q9UI54 55 aa3.21□□□□□ -1.9
PFDN5-201ENST00000243040 KRTAP6-1Q3LI64 71 aa3.2□□□□□ -1.9
PFDN5-201ENST00000243040 KRTAP5-10Q6L8G5 202 aa3.2□□□□□ -1.9
PFDN5-201ENST00000243040 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
PFDN5-201ENST00000243040 KRTAP9-4Q9BYQ2 154 aa3.11□□□□□ -1.91
PFDN5-201ENST00000243040 SVIPQ8NHG7 77 aa3.1□□□□□ -1.91
PFDN5-201ENST00000243040 PRAC1Q96KF2 57 aa3.07□□□□□ -1.92
PFDN5-201ENST00000243040 KRTAP5-7Q6L8G8 165 aa3.06□□□□□ -1.92
PFDN5-201ENST00000243040 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
PFDN5-201ENST00000243040 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
PFDN5-201ENST00000243040 KTN1-AS1Q86SY8 53 aa2.96□□□□□ -1.94
PFDN5-201ENST00000243040 H3BS24 57 aa2.95□□□□□ -1.94
PFDN5-201ENST00000243040 MT3P25713 68 aa2.95□□□□□ -1.94
PFDN5-201ENST00000243040 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
PFDN5-201ENST00000243040 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
PFDN5-201ENST00000243040 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
PFDN5-201ENST00000243040 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
PFDN5-201ENST00000243040 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
PFDN5-201ENST00000243040 KRTAP9-9Q9BYP9 154 aa2.69□□□□□ -1.98
PFDN5-201ENST00000243040 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
PFDN5-201ENST00000243040 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
PFDN5-201ENST00000243040 LUZP6Q538Z0 58 aa2.58□□□□□ -2
PFDN5-201ENST00000243040 KRTAP4-2Q9BYR5 136 aa2.53□□□□□ -2
PFDN5-201ENST00000243040 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
PFDN5-201ENST00000243040 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
PFDN5-201ENST00000243040 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
PFDN5-201ENST00000243040 A0A0A0MQY5 61 aa2.42□□□□□ -2.02
PFDN5-201ENST00000243040 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
PFDN5-201ENST00000243040 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
PFDN5-201ENST00000243040 NDUFAF8A1L188 74 aa2.27□□□□□ -2.05
PFDN5-201ENST00000243040 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
PFDN5-201ENST00000243040 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
PFDN5-201ENST00000243040 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
PFDN5-201ENST00000243040 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
PFDN5-201ENST00000243040 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
PFDN5-201ENST00000243040 INE1O15225 51 aa1.94□□□□□ -2.1
PFDN5-201ENST00000243040 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
PFDN5-201ENST00000243040 PRM1P04553 51 aa1.86□□□□□ -2.11
PFDN5-201ENST00000243040 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
PFDN5-201ENST00000243040 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
PFDN5-201ENST00000243040 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms