RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 KRTAP12-3P60328 96 aa3.55□□□□□ -1.84
SYDE2-201ENST00000234668 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
SYDE2-201ENST00000234668 KRTAP5-3Q6L8H2 238 aa3.46□□□□□ -1.85
SYDE2-201ENST00000234668 PRO2289Q9P1D8 64 aa3.46□□□□□ -1.86
SYDE2-201ENST00000234668 KRTAP19-5Q3LI72 72 aa3.46□□□□□ -1.86
SYDE2-201ENST00000234668 SSPOA2VEC9 5147 aa3.37□□□□□ -1.87
SYDE2-201ENST00000234668 KRTAP9-7A8MTY7 169 aa3.35□□□□□ -1.87
SYDE2-201ENST00000234668 LCE4AQ5TA78 99 aa3.34□□□□□ -1.87
SYDE2-201ENST00000234668 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
SYDE2-201ENST00000234668 LCE5AQ5TCM9 118 aa3.29□□□□□ -1.88
SYDE2-201ENST00000234668 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
SYDE2-201ENST00000234668 KRTAP19-7Q3SYF9 63 aa3.27□□□□□ -1.89
SYDE2-201ENST00000234668 MUC12Q9UKN1 5478 aa3.27□□□□□ -1.89
SYDE2-201ENST00000234668 FCGBPQ9Y6R7 5405 aaPredicted RBP3.25□□□□□ -1.89
SYDE2-201ENST00000234668 DSTQ03001 7570 aaKnown RBP3.24□□□□□ -1.89
SYDE2-201ENST00000234668 MT1EP04732 61 aa3.16□□□□□ -1.9
SYDE2-201ENST00000234668 MT1LQ93083 61 aa3.16□□□□□ -1.9
SYDE2-201ENST00000234668 KRTAP4-3Q9BYR4 195 aa3.15□□□□□ -1.9
SYDE2-201ENST00000234668 CRCT1Q9UGL9 99 aa3.1□□□□□ -1.91
SYDE2-201ENST00000234668 INE1O15225 51 aa3.09□□□□□ -1.91
SYDE2-201ENST00000234668 KRTAP19-6Q3LI70 58 aa3.08□□□□□ -1.92
SYDE2-201ENST00000234668 MACF1Q9UPN3 7388 aaKnown RBP3.05□□□□□ -1.92
SYDE2-201ENST00000234668 MT1GP13640 62 aa3.05□□□□□ -1.92
SYDE2-201ENST00000234668 SYNE2Q8WXH0 6885 aaKnown RBP3.03□□□□□ -1.92
SYDE2-201ENST00000234668 KRTAP2-3P0C7H8 128 aa3.02□□□□□ -1.93
SYDE2-201ENST00000234668 KRTAP2-4Q9BYR9 128 aa3.02□□□□□ -1.93
SYDE2-201ENST00000234668 KRTAP2-1Q9BYU5 128 aa3.02□□□□□ -1.93
SYDE2-201ENST00000234668 SYNE1Q8NF91 8797 aaKnown RBP3.01□□□□□ -1.93
SYDE2-201ENST00000234668 MDN1Q9NU22 5596 aa2.98□□□□□ -1.93
SYDE2-201ENST00000234668 MT1MQ8N339 61 aa2.96□□□□□ -1.94
SYDE2-201ENST00000234668 SPRR2FQ96RM1 72 aa2.95□□□□□ -1.94
SYDE2-201ENST00000234668 KRTAP19-3Q7Z4W3 81 aa2.95□□□□□ -1.94
SYDE2-201ENST00000234668 LCE1AQ5T7P2 110 aa2.93□□□□□ -1.94
SYDE2-201ENST00000234668 OBSCNQ5VST9 7968 aa2.92□□□□□ -1.94
SYDE2-201ENST00000234668 MT3P25713 68 aa2.84□□□□□ -1.96
SYDE2-201ENST00000234668 LCE1FQ5T754 118 aa2.84□□□□□ -1.96
SYDE2-201ENST00000234668 KRTAP12-4P60329 112 aa2.78□□□□□ -1.96
SYDE2-201ENST00000234668 KRTAP6-1Q3LI64 71 aa2.74□□□□□ -1.97
SYDE2-201ENST00000234668 SPRR2EP22531 72 aa2.67□□□□□ -1.98
SYDE2-201ENST00000234668 SPRR2BP35325 72 aa2.67□□□□□ -1.98
SYDE2-201ENST00000234668 SPRR2AP35326 72 aa2.67□□□□□ -1.98
SYDE2-201ENST00000234668 KRTAP2-2Q9BYT5 123 aa2.65□□□□□ -1.99
SYDE2-201ENST00000234668 KRTAP5-9P26371 169 aa2.62□□□□□ -1.99
SYDE2-201ENST00000234668 MT1AP04731 61 aa2.6□□□□□ -1.99
SYDE2-201ENST00000234668 KRTAP6-3Q3LI67 103 aa2.59□□□□□ -1.99
SYDE2-201ENST00000234668 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
SYDE2-201ENST00000234668 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
SYDE2-201ENST00000234668 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
SYDE2-201ENST00000234668 SPRR2DP22532 72 aa2.53□□□□□ -2
SYDE2-201ENST00000234668 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
SYDE2-201ENST00000234668 KRTAP6-2Q3LI66 62 aa2.47□□□□□ -2.01
SYDE2-201ENST00000234668 PRM1P04553 51 aa2.46□□□□□ -2.02
SYDE2-201ENST00000234668 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
SYDE2-201ENST00000234668 NEBP20929 6669 aa2.45□□□□□ -2.02
SYDE2-201ENST00000234668 KRTAP20-1Q3LI63 56 aa2.36□□□□□ -2.03
SYDE2-201ENST00000234668 MT4P47944 62 aa2.34□□□□□ -2.04
SYDE2-201ENST00000234668 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
SYDE2-201ENST00000234668 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
SYDE2-201ENST00000234668 LCE1EQ5T753 118 aa2.27□□□□□ -2.05
SYDE2-201ENST00000234668 KRTAP5-4Q6L8H1 288 aa2.23□□□□□ -2.05
SYDE2-201ENST00000234668 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
SYDE2-201ENST00000234668 KRTAP5-1Q6L8H4 278 aa2.11□□□□□ -2.07
SYDE2-201ENST00000234668 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
SYDE2-201ENST00000234668 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
SYDE2-201ENST00000234668 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
SYDE2-201ENST00000234668 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
SYDE2-201ENST00000234668 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
SYDE2-201ENST00000234668 MUC5BQ9HC84 5762 aaPredicted RBP1.89□□□□□ -2.11
SYDE2-201ENST00000234668 AHNAK2Q8IVF2 5795 aa1.87□□□□□ -2.11
SYDE2-201ENST00000234668 KRTAP5-10Q6L8G5 202 aa1.86□□□□□ -2.11
SYDE2-201ENST00000234668 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.12
SYDE2-201ENST00000234668 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
SYDE2-201ENST00000234668 LCE1CQ5T751 118 aa1.77□□□□□ -2.13
SYDE2-201ENST00000234668 KRTAP5-8O75690 187 aa1.72□□□□□ -2.13
SYDE2-201ENST00000234668 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
SYDE2-201ENST00000234668 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
SYDE2-201ENST00000234668 PHGR1C9JFL3 82 aa1.34□□□□□ -2.2
SYDE2-201ENST00000234668 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 84.4 ms