RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 KRTAP5-9P26371 169 aa6.64□□□□□ -1.35
SNX17-201ENST00000233575 MT1LQ93083 61 aa6.62□□□□□ -1.35
SNX17-201ENST00000233575 SPRR5A0A1B0GTR4 108 aa6.58□□□□□ -1.36
SNX17-201ENST00000233575 MDN1Q9NU22 5596 aa6.57□□□□□ -1.36
SNX17-201ENST00000233575 KRTAP6-3Q3LI67 103 aa6.55□□□□□ -1.36
SNX17-201ENST00000233575 KRTAP19-3Q7Z4W3 81 aa6.52□□□□□ -1.37
SNX17-201ENST00000233575 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
SNX17-201ENST00000233575 LCE3CQ5T5A8 94 aa6.47□□□□□ -1.37
SNX17-201ENST00000233575 LCE1AQ5T7P2 110 aa6.44□□□□□ -1.38
SNX17-201ENST00000233575 KRTAP9-7A8MTY7 169 aa6.43□□□□□ -1.38
SNX17-201ENST00000233575 MT1GP13640 62 aa6.42□□□□□ -1.38
SNX17-201ENST00000233575 LCE5AQ5TCM9 118 aa6.42□□□□□ -1.38
SNX17-201ENST00000233575 SPRR2EP22531 72 aa6.39□□□□□ -1.39
SNX17-201ENST00000233575 SPRR2BP35325 72 aa6.39□□□□□ -1.39
SNX17-201ENST00000233575 SPRR2AP35326 72 aa6.39□□□□□ -1.39
SNX17-201ENST00000233575 MT1MQ8N339 61 aa6.39□□□□□ -1.39
SNX17-201ENST00000233575 KRTAP19-4Q3LI73 84 aa6.35□□□□□ -1.39
SNX17-201ENST00000233575 KRTAP4-3Q9BYR4 195 aa6.34□□□□□ -1.39
SNX17-201ENST00000233575 DSTQ03001 7570 aaKnown RBP6.29□□□□□ -1.4
SNX17-201ENST00000233575 NEBP20929 6669 aa6.27□□□□□ -1.41
SNX17-201ENST00000233575 INE1O15225 51 aa6.2□□□□□ -1.42
SNX17-201ENST00000233575 KRTAP9-6A8MVA2 160 aa6.2□□□□□ -1.42
SNX17-201ENST00000233575 SPRR2DP22532 72 aa6.15□□□□□ -1.42
SNX17-201ENST00000233575 LOC100996750A0A140TA64 210 aa6.09□□□□□ -1.43
SNX17-201ENST00000233575 LCE3BQ5TA77 95 aa5.92□□□□□ -1.46
SNX17-201ENST00000233575 KRTAP5-5Q701N2 237 aaPredicted RBP5.77□□□□□ -1.49
SNX17-201ENST00000233575 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
SNX17-201ENST00000233575 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
SNX17-201ENST00000233575 KRTAP20-1Q3LI63 56 aa5.67□□□□□ -1.5
SNX17-201ENST00000233575 KRTAP2-2Q9BYT5 123 aa5.62□□□□□ -1.51
SNX17-201ENST00000233575 KRTAP2-1Q9BYU5 128 aa5.62□□□□□ -1.51
SNX17-201ENST00000233575 SYNE1Q8NF91 8797 aaKnown RBP5.61□□□□□ -1.51
SNX17-201ENST00000233575 KRTAP6-1Q3LI64 71 aa5.61□□□□□ -1.51
SNX17-201ENST00000233575 MT1AP04731 61 aa5.6□□□□□ -1.51
SNX17-201ENST00000233575 KRTAP5-4Q6L8H1 288 aa5.53□□□□□ -1.52
SNX17-201ENST00000233575 LCE4AQ5TA78 99 aa5.4□□□□□ -1.54
SNX17-201ENST00000233575 MT4P47944 62 aa5.39□□□□□ -1.55
SNX17-201ENST00000233575 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
SNX17-201ENST00000233575 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
SNX17-201ENST00000233575 KRTAP9-4Q9BYQ2 154 aa5.34□□□□□ -1.55
SNX17-201ENST00000233575 KRTAP12-4P60329 112 aa5.33□□□□□ -1.56
SNX17-201ENST00000233575 LCE1DQ5T752 114 aa5.3□□□□□ -1.56
SNX17-201ENST00000233575 HMCN1Q96RW7 5635 aa5.28□□□□□ -1.56
SNX17-201ENST00000233575 KRTAP20-2Q3LI61 65 aa5.19□□□□□ -1.58
SNX17-201ENST00000233575 KRTAP6-2Q3LI66 62 aa5.18□□□□□ -1.58
SNX17-201ENST00000233575 MT3P25713 68 aa5.06□□□□□ -1.6
SNX17-201ENST00000233575 KRTAP5-3Q6L8H2 238 aa5.01□□□□□ -1.61
SNX17-201ENST00000233575 KRTAP5-2Q701N4 177 aa5.01□□□□□ -1.61
SNX17-201ENST00000233575 OBSCNQ5VST9 7968 aa4.94□□□□□ -1.62
SNX17-201ENST00000233575 LCE3DQ9BYE3 92 aa4.83□□□□□ -1.64
SNX17-201ENST00000233575 AHNAK2Q8IVF2 5795 aa4.71□□□□□ -1.66
SNX17-201ENST00000233575 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
SNX17-201ENST00000233575 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
SNX17-201ENST00000233575 KRTAP5-10Q6L8G5 202 aa4.43□□□□□ -1.7
SNX17-201ENST00000233575 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
SNX17-201ENST00000233575 KRTAP5-8O75690 187 aa4.37□□□□□ -1.71
SNX17-201ENST00000233575 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
SNX17-201ENST00000233575 GPR98Q8WXG9 6306 aa4.36□□□□□ -1.71
SNX17-201ENST00000233575 MUC5ACP98088 5654 aa4.23□□□□□ -1.73
SNX17-201ENST00000233575 PRM1P04553 51 aa4.22□□□□□ -1.73
SNX17-201ENST00000233575 LCE1BQ5T7P3 118 aa4.21□□□□□ -1.74
SNX17-201ENST00000233575 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
SNX17-201ENST00000233575 KRTAP5-7Q6L8G8 165 aa4.16□□□□□ -1.74
SNX17-201ENST00000233575 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
SNX17-201ENST00000233575 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
SNX17-201ENST00000233575 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
SNX17-201ENST00000233575 MUC5BQ9HC84 5762 aaPredicted RBP3.83□□□□□ -1.8
SNX17-201ENST00000233575 KRTAP21-2Q3LI59 83 aa3.67□□□□□ -1.82
SNX17-201ENST00000233575 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
SNX17-201ENST00000233575 AHNAKQ09666 5890 aaKnown RBP3.56□□□□□ -1.84
SNX17-201ENST00000233575 KRTAP4-12Q9BQ66 201 aa3.54□□□□□ -1.84
SNX17-201ENST00000233575 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
SNX17-201ENST00000233575 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
SNX17-201ENST00000233575 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
SNX17-201ENST00000233575 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
SNX17-201ENST00000233575 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
SNX17-201ENST00000233575 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 144.2 ms