RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 V9GYY9 64 aa4.56□□□□□ -1.68
SF3B6-201ENST00000233468 UQCR11O14957 56 aa4.53□□□□□ -1.68
SF3B6-201ENST00000233468 KRTAP12-1P59990 96 aa4.52□□□□□ -1.69
SF3B6-201ENST00000233468 KRTAP5-11Q6L8G4 156 aa4.51□□□□□ -1.69
SF3B6-201ENST00000233468 KRTAP8-1Q8IUC2 63 aa4.51□□□□□ -1.69
SF3B6-201ENST00000233468 A8MU10 97 aa4.49□□□□□ -1.69
SF3B6-201ENST00000233468 KRTAP10-12P60413 245 aa4.49□□□□□ -1.69
SF3B6-201ENST00000233468 KRTAP2-1Q9BYU5 128 aa4.48□□□□□ -1.69
SF3B6-201ENST00000233468 Q1T7F1 81 aa4.47□□□□□ -1.69
SF3B6-201ENST00000233468 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
SF3B6-201ENST00000233468 SPRR2DP22532 72 aa4.42□□□□□ -1.7
SF3B6-201ENST00000233468 RPS28P62857 69 aaKnown RBP4.42□□□□□ -1.7
SF3B6-201ENST00000233468 MIR22HGQ0VDD5 57 aa4.42□□□□□ -1.7
SF3B6-201ENST00000233468 PSPHP1O15172 72 aa4.41□□□□□ -1.7
SF3B6-201ENST00000233468 K7ERS5 55 aa4.39□□□□□ -1.71
SF3B6-201ENST00000233468 TNP1P09430 55 aa4.33□□□□□ -1.72
SF3B6-201ENST00000233468 A6NED7 52 aa4.32□□□□□ -1.72
SF3B6-201ENST00000233468 C10orf95Q9H7T3 257 aa4.29□□□□□ -1.72
SF3B6-201ENST00000233468 KRTAP25-1Q3LHN0 102 aa4.19□□□□□ -1.74
SF3B6-201ENST00000233468 KRTAP19-7Q3SYF9 63 aa4.19□□□□□ -1.74
SF3B6-201ENST00000233468 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
SF3B6-201ENST00000233468 MT1EP04732 61 aa4.16□□□□□ -1.74
SF3B6-201ENST00000233468 LCE3AQ5TA76 89 aa4.16□□□□□ -1.74
SF3B6-201ENST00000233468 KRTAP19-5Q3LI72 72 aa4.15□□□□□ -1.75
SF3B6-201ENST00000233468 CDC42SE1Q9NRR8 79 aa4.15□□□□□ -1.75
SF3B6-201ENST00000233468 KRTAP19-3Q7Z4W3 81 aa4.12□□□□□ -1.75
SF3B6-201ENST00000233468 DSTQ03001 7570 aaKnown RBP4.11□□□□□ -1.75
SF3B6-201ENST00000233468 PP632Q6XCG6 107 aa4.08□□□□□ -1.76
SF3B6-201ENST00000233468 GPR98Q8WXG9 6306 aa4.08□□□□□ -1.76
SF3B6-201ENST00000233468 MT1GP13640 62 aa4.07□□□□□ -1.76
SF3B6-201ENST00000233468 ROMO1P60602 79 aa4.05□□□□□ -1.76
SF3B6-201ENST00000233468 KRTAP12-3P60328 96 aa4.04□□□□□ -1.76
SF3B6-201ENST00000233468 MT1LQ93083 61 aa4.01□□□□□ -1.77
SF3B6-201ENST00000233468 NDUFAF8A1L188 74 aa4□□□□□ -1.77
SF3B6-201ENST00000233468 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
SF3B6-201ENST00000233468 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
SF3B6-201ENST00000233468 MT1MQ8N339 61 aa3.95□□□□□ -1.78
SF3B6-201ENST00000233468 PRAC1Q96KF2 57 aa3.94□□□□□ -1.78
SF3B6-201ENST00000233468 MT4P47944 62 aa3.92□□□□□ -1.78
SF3B6-201ENST00000233468 KRTAP5-1Q6L8H4 278 aa3.91□□□□□ -1.78
SF3B6-201ENST00000233468 BRK1Q8WUW1 75 aa3.91□□□□□ -1.78
SF3B6-201ENST00000233468 HMCN1Q96RW7 5635 aa3.89□□□□□ -1.79
SF3B6-201ENST00000233468 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
SF3B6-201ENST00000233468 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
SF3B6-201ENST00000233468 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
SF3B6-201ENST00000233468 KRTAP5-10Q6L8G5 202 aa3.81□□□□□ -1.8
SF3B6-201ENST00000233468 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
SF3B6-201ENST00000233468 PMAIP1Q13794 54 aa3.71□□□□□ -1.82
SF3B6-201ENST00000233468 KRTAP5-7Q6L8G8 165 aa3.67□□□□□ -1.82
SF3B6-201ENST00000233468 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
SF3B6-201ENST00000233468 KRTAP20-2Q3LI61 65 aa3.59□□□□□ -1.83
SF3B6-201ENST00000233468 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.83
SF3B6-201ENST00000233468 PRO0628Q9UI54 55 aa3.59□□□□□ -1.83
SF3B6-201ENST00000233468 KRTAP12-4P60329 112 aa3.55□□□□□ -1.84
SF3B6-201ENST00000233468 SPRR5A0A1B0GTR4 108 aa3.53□□□□□ -1.84
SF3B6-201ENST00000233468 SYNE1Q8NF91 8797 aaKnown RBP3.46□□□□□ -1.86
SF3B6-201ENST00000233468 MT1AP04731 61 aa3.43□□□□□ -1.86
SF3B6-201ENST00000233468 KTN1-AS1Q86SY8 53 aa3.39□□□□□ -1.87
SF3B6-201ENST00000233468 OBSCNQ5VST9 7968 aa3.38□□□□□ -1.87
SF3B6-201ENST00000233468 KRTAP6-1Q3LI64 71 aa3.37□□□□□ -1.87
SF3B6-201ENST00000233468 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
SF3B6-201ENST00000233468 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
SF3B6-201ENST00000233468 KRTAP6-2Q3LI66 62 aa3.2□□□□□ -1.9
SF3B6-201ENST00000233468 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
SF3B6-201ENST00000233468 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
SF3B6-201ENST00000233468 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
SF3B6-201ENST00000233468 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
SF3B6-201ENST00000233468 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
SF3B6-201ENST00000233468 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
SF3B6-201ENST00000233468 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
SF3B6-201ENST00000233468 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
SF3B6-201ENST00000233468 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
SF3B6-201ENST00000233468 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
SF3B6-201ENST00000233468 INE1O15225 51 aa2.13□□□□□ -2.07
SF3B6-201ENST00000233468 PRM1P04553 51 aa2.05□□□□□ -2.08
SF3B6-201ENST00000233468 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
SF3B6-201ENST00000233468 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 10.2 ms