RNA–Protein interactions for RNA: ENST00000231021.8

CDH9-201, Transcript of cadherin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH9, Length 3,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-201ENST00000231021 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
CDH9-201ENST00000231021 COL7A1Q02388 2944 aa1.7□□□□□ -2.14
CDH9-201ENST00000231021 LRP1Q07954 4544 aaKnown RBP1.7□□□□□ -2.14
CDH9-201ENST00000231021 MGAM2Q2M2H8 2515 aa1.68□□□□□ -2.14
CDH9-201ENST00000231021 RNF213Q63HN8 5207 aa1.68□□□□□ -2.14
CDH9-201ENST00000231021 APOBP04114 4563 aaKnown RBP1.67□□□□□ -2.14
CDH9-201ENST00000231021 PKD1P98161 4303 aa1.65□□□□□ -2.15
CDH9-201ENST00000231021 MUC17Q685J3 4493 aa1.64□□□□□ -2.15
CDH9-201ENST00000231021 SMR3BP02814 79 aaPredicted RBP1.64□□□□□ -2.15
CDH9-201ENST00000231021 KRTAP2-1Q9BYU5 128 aa1.63□□□□□ -2.15
CDH9-201ENST00000231021 OBSCNQ5VST9 7968 aa1.62□□□□□ -2.15
CDH9-201ENST00000231021 SYNE2Q8WXH0 6885 aaKnown RBP1.61□□□□□ -2.15
CDH9-201ENST00000231021 KRTAP12-4P60329 112 aa1.61□□□□□ -2.15
CDH9-201ENST00000231021 KRTAP8-1Q8IUC2 63 aa1.61□□□□□ -2.15
CDH9-201ENST00000231021 KRTAP10-5P60370 271 aa1.59□□□□□ -2.16
CDH9-201ENST00000231021 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.16
CDH9-201ENST00000231021 AHNAK2Q8IVF2 5795 aa1.58□□□□□ -2.16
CDH9-201ENST00000231021 MT1HL1P0DM35 61 aa1.57□□□□□ -2.16
CDH9-201ENST00000231021 FLGP20930 4061 aaPredicted RBP1.57□□□□□ -2.16
CDH9-201ENST00000231021 SPRR2GQ9BYE4 73 aa1.55□□□□□ -2.16
CDH9-201ENST00000231021 KRTAP12-3P60328 96 aa1.54□□□□□ -2.16
CDH9-201ENST00000231021 LCE3AQ5TA76 89 aa1.53□□□□□ -2.16
CDH9-201ENST00000231021 KRTAP19-2Q3LHN2 52 aa1.53□□□□□ -2.16
CDH9-201ENST00000231021 KRTAP9-6A8MVA2 160 aa1.52□□□□□ -2.17
CDH9-201ENST00000231021 KRTAP5-9P26371 169 aa1.52□□□□□ -2.17
CDH9-201ENST00000231021 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
CDH9-201ENST00000231021 LRP2P98164 4655 aa1.5□□□□□ -2.17
CDH9-201ENST00000231021 DSTQ03001 7570 aaKnown RBP1.48□□□□□ -2.17
CDH9-201ENST00000231021 USH2AO75445 5202 aa1.48□□□□□ -2.17
CDH9-201ENST00000231021 KRTAP5-4Q6L8H1 288 aa1.48□□□□□ -2.17
CDH9-201ENST00000231021 KRTAP4-4Q9BYR3 166 aa1.47□□□□□ -2.17
CDH9-201ENST00000231021 FSIP2Q5CZC0 6907 aa1.46□□□□□ -2.18
CDH9-201ENST00000231021 KRTAP19-8Q3LI54 63 aa1.46□□□□□ -2.18
CDH9-201ENST00000231021 KMT2DO14686 5537 aa1.45□□□□□ -2.18
CDH9-201ENST00000231021 KRTAP5-1Q6L8H4 278 aa1.44□□□□□ -2.18
CDH9-201ENST00000231021 KRTAP4-1Q9BYQ7 146 aa1.44□□□□□ -2.18
CDH9-201ENST00000231021 KRTAP19-6Q3LI70 58 aa1.44□□□□□ -2.18
CDH9-201ENST00000231021 M0R2T5 61 aa1.41□□□□□ -2.18
CDH9-201ENST00000231021 MT1XP80297 61 aa1.38□□□□□ -2.19
CDH9-201ENST00000231021 LPAP08519 4548 aa1.38□□□□□ -2.19
CDH9-201ENST00000231021 KRTAP5-5Q701N2 237 aaPredicted RBP1.38□□□□□ -2.19
CDH9-201ENST00000231021 SYNE1Q8NF91 8797 aaKnown RBP1.37□□□□□ -2.19
CDH9-201ENST00000231021 KRTAP19-5Q3LI72 72 aa1.35□□□□□ -2.19
CDH9-201ENST00000231021 MT1BP07438 61 aa1.34□□□□□ -2.2
CDH9-201ENST00000231021 MT2AP02795 61 aa1.32□□□□□ -2.2
CDH9-201ENST00000231021 FCGBPQ9Y6R7 5405 aaPredicted RBP1.32□□□□□ -2.2
CDH9-201ENST00000231021 MUC5ACP98088 5654 aa1.31□□□□□ -2.2
CDH9-201ENST00000231021 MT1FP04733 61 aa1.3□□□□□ -2.2
CDH9-201ENST00000231021 MT1EP04732 61 aa1.29□□□□□ -2.2
CDH9-201ENST00000231021 MT1HP80294 61 aa1.28□□□□□ -2.2
CDH9-201ENST00000231021 MT1LQ93083 61 aa1.26□□□□□ -2.21
CDH9-201ENST00000231021 KRTAP4-3Q9BYR4 195 aa1.26□□□□□ -2.21
CDH9-201ENST00000231021 LCE1CQ5T751 118 aa1.26□□□□□ -2.21
CDH9-201ENST00000231021 LCE1BQ5T7P3 118 aa1.26□□□□□ -2.21
CDH9-201ENST00000231021 MDN1Q9NU22 5596 aa1.25□□□□□ -2.21
CDH9-201ENST00000231021 MT1AP04731 61 aa1.25□□□□□ -2.21
CDH9-201ENST00000231021 KRTAP5-8O75690 187 aa1.24□□□□□ -2.21
CDH9-201ENST00000231021 KRTAP19-7Q3SYF9 63 aa1.22□□□□□ -2.21
CDH9-201ENST00000231021 KRTAP5-2Q701N4 177 aa1.2□□□□□ -2.22
CDH9-201ENST00000231021 PRM1P04553 51 aa1.19□□□□□ -2.22
CDH9-201ENST00000231021 MT1GP13640 62 aa1.15□□□□□ -2.23
CDH9-201ENST00000231021 SPRR2DP22532 72 aa1.12□□□□□ -2.23
CDH9-201ENST00000231021 SPRR2EP22531 72 aa1.11□□□□□ -2.23
CDH9-201ENST00000231021 SPRR2BP35325 72 aa1.11□□□□□ -2.23
CDH9-201ENST00000231021 SPRR2AP35326 72 aa1.11□□□□□ -2.23
CDH9-201ENST00000231021 SPRR2FQ96RM1 72 aa1.11□□□□□ -2.23
CDH9-201ENST00000231021 MT1MQ8N339 61 aa1.1□□□□□ -2.23
CDH9-201ENST00000231021 KRTAP19-3Q7Z4W3 81 aa1.09□□□□□ -2.23
CDH9-201ENST00000231021 KRTAP6-2Q3LI66 62 aa1.04□□□□□ -2.24
CDH9-201ENST00000231021 MUC12Q9UKN1 5478 aa1.01□□□□□ -2.25
CDH9-201ENST00000231021 KRTAP6-1Q3LI64 71 aa1□□□□□ -2.25
CDH9-201ENST00000231021 KRTAP20-2Q3LI61 65 aa0.91□□□□□ -2.26
CDH9-201ENST00000231021 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
CDH9-201ENST00000231021 KRTAP21-2Q3LI59 83 aa0.8□□□□□ -2.28
CDH9-201ENST00000231021 MT4P47944 62 aa0.78□□□□□ -2.28
CDH9-201ENST00000231021 PHGR1C9JFL3 82 aa0.78□□□□□ -2.29
CDH9-201ENST00000231021 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 193.1 ms