RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 KRTAP2-3P0C7H8 128 aa5.4□□□□□ -1.54
VEGFA-201ENST00000230480 KRTAP2-4Q9BYR9 128 aa5.4□□□□□ -1.54
VEGFA-201ENST00000230480 SPRR2EP22531 72 aa5.38□□□□□ -1.55
VEGFA-201ENST00000230480 SPRR2BP35325 72 aa5.38□□□□□ -1.55
VEGFA-201ENST00000230480 SPRR2AP35326 72 aa5.38□□□□□ -1.55
VEGFA-201ENST00000230480 LCE1AQ5T7P2 110 aa5.36□□□□□ -1.55
VEGFA-201ENST00000230480 PP632Q6XCG6 107 aa5.34□□□□□ -1.55
VEGFA-201ENST00000230480 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
VEGFA-201ENST00000230480 KRTAP9-4Q9BYQ2 154 aa5.33□□□□□ -1.56
VEGFA-201ENST00000230480 CAMK2N1Q7Z7J9 78 aa5.27□□□□□ -1.57
VEGFA-201ENST00000230480 LUZP6Q538Z0 58 aa5.25□□□□□ -1.57
VEGFA-201ENST00000230480 KRTAP19-7Q3SYF9 63 aa5.23□□□□□ -1.57
VEGFA-201ENST00000230480 KRTAP2-2Q9BYT5 123 aa5.22□□□□□ -1.57
VEGFA-201ENST00000230480 KRTAP2-1Q9BYU5 128 aa5.22□□□□□ -1.57
VEGFA-201ENST00000230480 A0A0A0MQY5 61 aa5.21□□□□□ -1.58
VEGFA-201ENST00000230480 SPRR2DP22532 72 aa5.21□□□□□ -1.58
VEGFA-201ENST00000230480 LCE4AQ5TA78 99 aa5.21□□□□□ -1.58
VEGFA-201ENST00000230480 LCE1DQ5T752 114 aa5.16□□□□□ -1.58
VEGFA-201ENST00000230480 KRTAP23-1A1A580 65 aa5.15□□□□□ -1.59
VEGFA-201ENST00000230480 MT1EP04732 61 aa5.13□□□□□ -1.59
VEGFA-201ENST00000230480 KRTAP19-5Q3LI72 72 aa5.07□□□□□ -1.6
VEGFA-201ENST00000230480 LCE5AQ5TCM9 118 aa5.06□□□□□ -1.6
VEGFA-201ENST00000230480 SPRR5A0A1B0GTR4 108 aa5.03□□□□□ -1.6
VEGFA-201ENST00000230480 KRTAP4-7Q9BYR0 210 aa5.03□□□□□ -1.6
VEGFA-201ENST00000230480 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
VEGFA-201ENST00000230480 DSTQ03001 7570 aaKnown RBP5□□□□□ -1.61
VEGFA-201ENST00000230480 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
VEGFA-201ENST00000230480 TNP1P09430 55 aa4.97□□□□□ -1.61
VEGFA-201ENST00000230480 KRTAP4-9Q9BYQ8 210 aa4.97□□□□□ -1.61
VEGFA-201ENST00000230480 GPR98Q8WXG9 6306 aa4.93□□□□□ -1.62
VEGFA-201ENST00000230480 MT1LQ93083 61 aa4.92□□□□□ -1.62
VEGFA-201ENST00000230480 MT1GP13640 62 aa4.9□□□□□ -1.63
VEGFA-201ENST00000230480 MT1MQ8N339 61 aa4.87□□□□□ -1.63
VEGFA-201ENST00000230480 KRTAP4-11Q9BYQ6 195 aa4.83□□□□□ -1.64
VEGFA-201ENST00000230480 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
VEGFA-201ENST00000230480 KRTAP4-2Q9BYR5 136 aa4.78□□□□□ -1.64
VEGFA-201ENST00000230480 KRTAP12-3P60328 96 aa4.76□□□□□ -1.65
VEGFA-201ENST00000230480 INE1O15225 51 aa4.75□□□□□ -1.65
VEGFA-201ENST00000230480 KRTAP5-4Q6L8H1 288 aa4.61□□□□□ -1.67
VEGFA-201ENST00000230480 HMCN1Q96RW7 5635 aa4.56□□□□□ -1.68
VEGFA-201ENST00000230480 MT4P47944 62 aa4.54□□□□□ -1.68
VEGFA-201ENST00000230480 KRTAP5-5Q701N2 237 aaPredicted RBP4.51□□□□□ -1.69
VEGFA-201ENST00000230480 SYNE1Q8NF91 8797 aaKnown RBP4.44□□□□□ -1.7
VEGFA-201ENST00000230480 LCE3CQ5T5A8 94 aa4.42□□□□□ -1.7
VEGFA-201ENST00000230480 AHNAK2Q8IVF2 5795 aa4.41□□□□□ -1.7
VEGFA-201ENST00000230480 KRTAP5-10Q6L8G5 202 aa4.35□□□□□ -1.71
VEGFA-201ENST00000230480 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
VEGFA-201ENST00000230480 KRTAP20-2Q3LI61 65 aa4.3□□□□□ -1.72
VEGFA-201ENST00000230480 KRTAP5-3Q6L8H2 238 aa4.23□□□□□ -1.73
VEGFA-201ENST00000230480 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
VEGFA-201ENST00000230480 KRTAP5-7Q6L8G8 165 aa4.21□□□□□ -1.74
VEGFA-201ENST00000230480 KRTAP6-1Q3LI64 71 aa4.18□□□□□ -1.74
VEGFA-201ENST00000230480 MT1AP04731 61 aa4.17□□□□□ -1.74
VEGFA-201ENST00000230480 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
VEGFA-201ENST00000230480 KRTAP6-2Q3LI66 62 aa3.93□□□□□ -1.78
VEGFA-201ENST00000230480 OBSCNQ5VST9 7968 aa3.82□□□□□ -1.8
VEGFA-201ENST00000230480 KRTAP5-8O75690 187 aa3.8□□□□□ -1.8
VEGFA-201ENST00000230480 MT3P25713 68 aa3.75□□□□□ -1.81
VEGFA-201ENST00000230480 AHNAKQ09666 5890 aaKnown RBP3.74□□□□□ -1.81
VEGFA-201ENST00000230480 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
VEGFA-201ENST00000230480 MUC5BQ9HC84 5762 aaPredicted RBP3.71□□□□□ -1.82
VEGFA-201ENST00000230480 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
VEGFA-201ENST00000230480 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
VEGFA-201ENST00000230480 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
VEGFA-201ENST00000230480 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
VEGFA-201ENST00000230480 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
VEGFA-201ENST00000230480 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
VEGFA-201ENST00000230480 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
VEGFA-201ENST00000230480 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
VEGFA-201ENST00000230480 PRM1P04553 51 aa3.16□□□□□ -1.9
VEGFA-201ENST00000230480 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
VEGFA-201ENST00000230480 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
VEGFA-201ENST00000230480 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
VEGFA-201ENST00000230480 PHGR1C9JFL3 82 aa2.56□□□□□ -2
VEGFA-201ENST00000230480 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
VEGFA-201ENST00000230480 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
VEGFA-201ENST00000230480 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms