RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 TNP1P09430 55 aa6.95□□□□□ -1.3
PFN1-201ENST00000225655 C10orf95Q9H7T3 257 aa6.94□□□□□ -1.3
PFN1-201ENST00000225655 KRTAP25-1Q3LHN0 102 aa6.78□□□□□ -1.32
PFN1-201ENST00000225655 KRTAP19-7Q3SYF9 63 aa6.75□□□□□ -1.33
PFN1-201ENST00000225655 LCE5AQ5TCM9 118 aa6.72□□□□□ -1.33
PFN1-201ENST00000225655 MT1EP04732 61 aa6.69□□□□□ -1.34
PFN1-201ENST00000225655 ROMO1P60602 79 aa6.69□□□□□ -1.34
PFN1-201ENST00000225655 KRTAP19-3Q7Z4W3 81 aa6.68□□□□□ -1.34
PFN1-201ENST00000225655 LCE3AQ5TA76 89 aa6.66□□□□□ -1.34
PFN1-201ENST00000225655 DSTQ03001 7570 aaKnown RBP6.64□□□□□ -1.35
PFN1-201ENST00000225655 KRTAP19-5Q3LI72 72 aa6.58□□□□□ -1.36
PFN1-201ENST00000225655 KRTAP23-1A1A580 65 aa6.54□□□□□ -1.36
PFN1-201ENST00000225655 MT1GP13640 62 aa6.51□□□□□ -1.37
PFN1-201ENST00000225655 KRTAP4-9Q9BYQ8 210 aa6.51□□□□□ -1.37
PFN1-201ENST00000225655 PRAC1Q96KF2 57 aa6.49□□□□□ -1.37
PFN1-201ENST00000225655 PP632Q6XCG6 107 aa6.46□□□□□ -1.38
PFN1-201ENST00000225655 KRTAP12-3P60328 96 aa6.45□□□□□ -1.38
PFN1-201ENST00000225655 LOC100996750A0A140TA64 210 aa6.44□□□□□ -1.38
PFN1-201ENST00000225655 KRTAP4-6Q9BYQ5 205 aa6.44□□□□□ -1.38
PFN1-201ENST00000225655 MT1MQ8N339 61 aa6.38□□□□□ -1.39
PFN1-201ENST00000225655 MT1LQ93083 61 aa6.37□□□□□ -1.39
PFN1-201ENST00000225655 LCE1DQ5T752 114 aa6.36□□□□□ -1.39
PFN1-201ENST00000225655 H3BS24 57 aa6.34□□□□□ -1.39
PFN1-201ENST00000225655 LCE4AQ5TA78 99 aa6.32□□□□□ -1.4
PFN1-201ENST00000225655 MT4P47944 62 aa6.26□□□□□ -1.41
PFN1-201ENST00000225655 AHNAK2Q8IVF2 5795 aa6.24□□□□□ -1.41
PFN1-201ENST00000225655 HMCN1Q96RW7 5635 aa6.24□□□□□ -1.41
PFN1-201ENST00000225655 KRTAP4-3Q9BYR4 195 aa6.22□□□□□ -1.41
PFN1-201ENST00000225655 KRTAP19-4Q3LI73 84 aa6.19□□□□□ -1.42
PFN1-201ENST00000225655 KRTAP15-1Q3LI76 137 aa6.19□□□□□ -1.42
PFN1-201ENST00000225655 KRTAP5-4Q6L8H1 288 aa6.19□□□□□ -1.42
PFN1-201ENST00000225655 KRTAP5-10Q6L8G5 202 aa6.12□□□□□ -1.43
PFN1-201ENST00000225655 KRTAP4-7Q9BYR0 210 aa6.03□□□□□ -1.44
PFN1-201ENST00000225655 LCE3CQ5T5A8 94 aa5.97□□□□□ -1.45
PFN1-201ENST00000225655 KRTAP5-7Q6L8G8 165 aa5.97□□□□□ -1.45
PFN1-201ENST00000225655 KRTAP5-5Q701N2 237 aaPredicted RBP5.89□□□□□ -1.47
PFN1-201ENST00000225655 KRTAP20-2Q3LI61 65 aa5.84□□□□□ -1.47
PFN1-201ENST00000225655 KRTAP5-3Q6L8H2 238 aa5.82□□□□□ -1.48
PFN1-201ENST00000225655 SPRR5A0A1B0GTR4 108 aa5.81□□□□□ -1.48
PFN1-201ENST00000225655 KRTAP12-4P60329 112 aa5.76□□□□□ -1.49
PFN1-201ENST00000225655 NDUFAF8A1L188 74 aa5.63□□□□□ -1.51
PFN1-201ENST00000225655 KRTAP4-12Q9BQ66 201 aa5.54□□□□□ -1.52
PFN1-201ENST00000225655 SYNE1Q8NF91 8797 aaKnown RBP5.54□□□□□ -1.52
PFN1-201ENST00000225655 KRTAP9-6A8MVA2 160 aa5.52□□□□□ -1.53
PFN1-201ENST00000225655 KRTAP9-9Q9BYP9 154 aa5.47□□□□□ -1.53
PFN1-201ENST00000225655 KRTAP9-4Q9BYQ2 154 aa5.47□□□□□ -1.53
PFN1-201ENST00000225655 MT1AP04731 61 aa5.42□□□□□ -1.54
PFN1-201ENST00000225655 KRTAP5-2Q701N4 177 aa5.4□□□□□ -1.54
PFN1-201ENST00000225655 KRTAP6-1Q3LI64 71 aa5.39□□□□□ -1.55
PFN1-201ENST00000225655 KRTAP4-11Q9BYQ6 195 aa5.37□□□□□ -1.55
PFN1-201ENST00000225655 AHNAKQ09666 5890 aaKnown RBP5.36□□□□□ -1.55
PFN1-201ENST00000225655 LUZP6Q538Z0 58 aa5.31□□□□□ -1.56
PFN1-201ENST00000225655 A0A0A0MQY5 61 aa5.29□□□□□ -1.56
PFN1-201ENST00000225655 MUC5ACP98088 5654 aa5.24□□□□□ -1.57
PFN1-201ENST00000225655 MUC5BQ9HC84 5762 aaPredicted RBP5.21□□□□□ -1.57
PFN1-201ENST00000225655 KRTAP5-8O75690 187 aa5.19□□□□□ -1.58
PFN1-201ENST00000225655 KRTAP6-2Q3LI66 62 aa5.18□□□□□ -1.58
PFN1-201ENST00000225655 OBSCNQ5VST9 7968 aa5.05□□□□□ -1.6
PFN1-201ENST00000225655 KRTAP4-2Q9BYR5 136 aa5.01□□□□□ -1.61
PFN1-201ENST00000225655 MT3P25713 68 aa4.97□□□□□ -1.61
PFN1-201ENST00000225655 KRTAP5-1Q6L8H4 278 aa4.87□□□□□ -1.63
PFN1-201ENST00000225655 INE1O15225 51 aa4.83□□□□□ -1.64
PFN1-201ENST00000225655 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
PFN1-201ENST00000225655 LCE3DQ9BYE3 92 aa4.42□□□□□ -1.7
PFN1-201ENST00000225655 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
PFN1-201ENST00000225655 LCE1CQ5T751 118 aa4.28□□□□□ -1.72
PFN1-201ENST00000225655 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
PFN1-201ENST00000225655 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
PFN1-201ENST00000225655 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
PFN1-201ENST00000225655 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
PFN1-201ENST00000225655 KRTAP21-2Q3LI59 83 aa3.56□□□□□ -1.84
PFN1-201ENST00000225655 PHGR1C9JFL3 82 aa3.54□□□□□ -1.84
PFN1-201ENST00000225655 PRM1P04553 51 aa3.41□□□□□ -1.86
PFN1-201ENST00000225655 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
PFN1-201ENST00000225655 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
PFN1-201ENST00000225655 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
PFN1-201ENST00000225655 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 61.4 ms