RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
SHPK-201ENST00000225519 FCGBPQ9Y6R7 5405 aaPredicted RBP4.8□□□□□ -1.64
SHPK-201ENST00000225519 MACF1Q9UPN3 7388 aaKnown RBP4.79□□□□□ -1.64
SHPK-201ENST00000225519 SPRR2FQ96RM1 72 aa4.78□□□□□ -1.64
SHPK-201ENST00000225519 MT1LQ93083 61 aa4.75□□□□□ -1.65
SHPK-201ENST00000225519 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
SHPK-201ENST00000225519 KRTAP19-4Q3LI73 84 aa4.71□□□□□ -1.66
SHPK-201ENST00000225519 MT1EP04732 61 aa4.69□□□□□ -1.66
SHPK-201ENST00000225519 DSTQ03001 7570 aaKnown RBP4.69□□□□□ -1.66
SHPK-201ENST00000225519 KRTAP9-7A8MTY7 169 aa4.67□□□□□ -1.66
SHPK-201ENST00000225519 KRTAP12-4P60329 112 aa4.65□□□□□ -1.67
SHPK-201ENST00000225519 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.63□□□□□ -1.67
SHPK-201ENST00000225519 LOC100996750A0A140TA64 210 aa4.62□□□□□ -1.67
SHPK-201ENST00000225519 KRTAP19-6Q3LI70 58 aa4.62□□□□□ -1.67
SHPK-201ENST00000225519 MT1GP13640 62 aa4.59□□□□□ -1.67
SHPK-201ENST00000225519 SYNE1Q8NF91 8797 aaKnown RBP4.59□□□□□ -1.68
SHPK-201ENST00000225519 KRTAP4-3Q9BYR4 195 aa4.57□□□□□ -1.68
SHPK-201ENST00000225519 MUC12Q9UKN1 5478 aa4.54□□□□□ -1.68
SHPK-201ENST00000225519 SPRR2EP22531 72 aa4.53□□□□□ -1.68
SHPK-201ENST00000225519 SPRR2BP35325 72 aa4.53□□□□□ -1.68
SHPK-201ENST00000225519 SPRR2AP35326 72 aa4.53□□□□□ -1.68
SHPK-201ENST00000225519 LCE3BQ5TA77 95 aa4.39□□□□□ -1.71
SHPK-201ENST00000225519 MDN1Q9NU22 5596 aa4.38□□□□□ -1.71
SHPK-201ENST00000225519 MT1MQ8N339 61 aa4.38□□□□□ -1.71
SHPK-201ENST00000225519 SPRR2DP22532 72 aa4.35□□□□□ -1.71
SHPK-201ENST00000225519 KRTAP19-3Q7Z4W3 81 aa4.34□□□□□ -1.72
SHPK-201ENST00000225519 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
SHPK-201ENST00000225519 KRTAP6-3Q3LI67 103 aa4.28□□□□□ -1.72
SHPK-201ENST00000225519 LCE3DQ9BYE3 92 aa4.19□□□□□ -1.74
SHPK-201ENST00000225519 PRM1P04553 51 aa4.16□□□□□ -1.74
SHPK-201ENST00000225519 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.74
SHPK-201ENST00000225519 KRTAP20-1Q3LI63 56 aa4.15□□□□□ -1.75
SHPK-201ENST00000225519 NEBP20929 6669 aa4.15□□□□□ -1.75
SHPK-201ENST00000225519 MT1AP04731 61 aa4.1□□□□□ -1.75
SHPK-201ENST00000225519 LCE1AQ5T7P2 110 aa4.08□□□□□ -1.76
SHPK-201ENST00000225519 KRTAP6-1Q3LI64 71 aa4.07□□□□□ -1.76
SHPK-201ENST00000225519 LCE5AQ5TCM9 118 aa4.07□□□□□ -1.76
SHPK-201ENST00000225519 MT4P47944 62 aa4.01□□□□□ -1.77
SHPK-201ENST00000225519 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
SHPK-201ENST00000225519 KRTAP5-9P26371 169 aa3.94□□□□□ -1.78
SHPK-201ENST00000225519 MUC19Q7Z5P9 8384 aa3.91□□□□□ -1.78
SHPK-201ENST00000225519 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
SHPK-201ENST00000225519 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
SHPK-201ENST00000225519 KRTAP9-4Q9BYQ2 154 aa3.7□□□□□ -1.82
SHPK-201ENST00000225519 GPR98Q8WXG9 6306 aa3.65□□□□□ -1.83
SHPK-201ENST00000225519 MT3P25713 68 aa3.62□□□□□ -1.83
SHPK-201ENST00000225519 LCE1DQ5T752 114 aa3.58□□□□□ -1.84
SHPK-201ENST00000225519 KRTAP4-6Q9BYQ5 205 aa3.55□□□□□ -1.84
SHPK-201ENST00000225519 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
SHPK-201ENST00000225519 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
SHPK-201ENST00000225519 HMCN1Q96RW7 5635 aa3.44□□□□□ -1.86
SHPK-201ENST00000225519 KRTAP20-2Q3LI61 65 aa3.27□□□□□ -1.89
SHPK-201ENST00000225519 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
SHPK-201ENST00000225519 MUC5ACP98088 5654 aa3.16□□□□□ -1.9
SHPK-201ENST00000225519 KRTAP4-11Q9BYQ6 195 aa3.13□□□□□ -1.91
SHPK-201ENST00000225519 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
SHPK-201ENST00000225519 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
SHPK-201ENST00000225519 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.91
SHPK-201ENST00000225519 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
SHPK-201ENST00000225519 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
SHPK-201ENST00000225519 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
SHPK-201ENST00000225519 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
SHPK-201ENST00000225519 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.96
SHPK-201ENST00000225519 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
SHPK-201ENST00000225519 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
SHPK-201ENST00000225519 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
SHPK-201ENST00000225519 KRTAP4-2Q9BYR5 136 aa2.72□□□□□ -1.97
SHPK-201ENST00000225519 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
SHPK-201ENST00000225519 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
SHPK-201ENST00000225519 KRTAP5-7Q6L8G8 165 aa2.58□□□□□ -2
SHPK-201ENST00000225519 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
SHPK-201ENST00000225519 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
SHPK-201ENST00000225519 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
SHPK-201ENST00000225519 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
SHPK-201ENST00000225519 KRTAP5-11Q6L8G4 156 aa2.17□□□□□ -2.06
SHPK-201ENST00000225519 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
SHPK-201ENST00000225519 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 56.7 ms