RNA–Protein interactions for RNA: ENST00000217957.9

VSIG1-201, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG1, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-201ENST00000217957 COX6B2Q6YFQ2 88 aa3.59□□□□□ -1.84
VSIG1-201ENST00000217957 KRTAP4-7Q9BYR0 210 aa3.56□□□□□ -1.84
VSIG1-201ENST00000217957 S4R3F8 94 aa3.53□□□□□ -1.84
VSIG1-201ENST00000217957 FSIP2Q5CZC0 6907 aa3.51□□□□□ -1.85
VSIG1-201ENST00000217957 A0A0D9SG42 100 aa3.51□□□□□ -1.85
VSIG1-201ENST00000217957 H1FX-AS1Q4G0G2 97 aa3.48□□□□□ -1.85
VSIG1-201ENST00000217957 M0R2T5 61 aa3.47□□□□□ -1.85
VSIG1-201ENST00000217957 FLGP20930 4061 aaPredicted RBP3.44□□□□□ -1.86
VSIG1-201ENST00000217957 USH2AO75445 5202 aa3.42□□□□□ -1.86
VSIG1-201ENST00000217957 KRTAP19-6Q3LI70 58 aa3.42□□□□□ -1.86
VSIG1-201ENST00000217957 KRTAP5-9P26371 169 aa3.4□□□□□ -1.87
VSIG1-201ENST00000217957 H0YAA0 97 aa3.39□□□□□ -1.87
VSIG1-201ENST00000217957 KRTAP5-10Q6L8G5 202 aa3.36□□□□□ -1.87
VSIG1-201ENST00000217957 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
VSIG1-201ENST00000217957 M0QZ58 72 aa3.35□□□□□ -1.87
VSIG1-201ENST00000217957 KRTAP19-2Q3LHN2 52 aa3.35□□□□□ -1.87
VSIG1-201ENST00000217957 KRTAP10-5P60370 271 aa3.34□□□□□ -1.87
VSIG1-201ENST00000217957 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.87
VSIG1-201ENST00000217957 KRTAP4-9Q9BYQ8 210 aa3.3□□□□□ -1.88
VSIG1-201ENST00000217957 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
VSIG1-201ENST00000217957 MT1HP80294 61 aa3.28□□□□□ -1.88
VSIG1-201ENST00000217957 KRTAP12-3P60328 96 aa3.26□□□□□ -1.89
VSIG1-201ENST00000217957 KMT2DO14686 5537 aa3.19□□□□□ -1.9
VSIG1-201ENST00000217957 MT1FP04733 61 aa3.19□□□□□ -1.9
VSIG1-201ENST00000217957 MT2AP02795 61 aa3.16□□□□□ -1.9
VSIG1-201ENST00000217957 AHNAK2Q8IVF2 5795 aa3.13□□□□□ -1.91
VSIG1-201ENST00000217957 SPRR2GQ9BYE4 73 aa3□□□□□ -1.93
VSIG1-201ENST00000217957 SYNE2Q8WXH0 6885 aaKnown RBP2.99□□□□□ -1.93
VSIG1-201ENST00000217957 MT1BP07438 61 aa2.96□□□□□ -1.94
VSIG1-201ENST00000217957 DSTQ03001 7570 aaKnown RBP2.95□□□□□ -1.94
VSIG1-201ENST00000217957 MACF1Q9UPN3 7388 aaKnown RBP2.9□□□□□ -1.95
VSIG1-201ENST00000217957 TNP1P09430 55 aa2.9□□□□□ -1.95
VSIG1-201ENST00000217957 MT1XP80297 61 aa2.89□□□□□ -1.95
VSIG1-201ENST00000217957 MUC12Q9UKN1 5478 aa2.89□□□□□ -1.95
VSIG1-201ENST00000217957 FCGBPQ9Y6R7 5405 aaPredicted RBP2.88□□□□□ -1.95
VSIG1-201ENST00000217957 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
VSIG1-201ENST00000217957 KRTAP19-8Q3LI54 63 aa2.87□□□□□ -1.95
VSIG1-201ENST00000217957 LCE3AQ5TA76 89 aa2.85□□□□□ -1.95
VSIG1-201ENST00000217957 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
VSIG1-201ENST00000217957 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
VSIG1-201ENST00000217957 MDN1Q9NU22 5596 aa2.76□□□□□ -1.97
VSIG1-201ENST00000217957 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
VSIG1-201ENST00000217957 KRTAP19-5Q3LI72 72 aa2.7□□□□□ -1.98
VSIG1-201ENST00000217957 SYNE1Q8NF91 8797 aaKnown RBP2.65□□□□□ -1.98
VSIG1-201ENST00000217957 SPRR2DP22532 72 aa2.65□□□□□ -1.99
VSIG1-201ENST00000217957 KRTAP5-4Q6L8H1 288 aa2.65□□□□□ -1.99
VSIG1-201ENST00000217957 SPRR2EP22531 72 aa2.64□□□□□ -1.99
VSIG1-201ENST00000217957 SPRR2BP35325 72 aa2.64□□□□□ -1.99
VSIG1-201ENST00000217957 SPRR2AP35326 72 aa2.64□□□□□ -1.99
VSIG1-201ENST00000217957 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
VSIG1-201ENST00000217957 KRTAP8-1Q8IUC2 63 aa2.62□□□□□ -1.99
VSIG1-201ENST00000217957 SPRR2FQ96RM1 72 aa2.59□□□□□ -2
VSIG1-201ENST00000217957 KRTAP19-7Q3SYF9 63 aa2.57□□□□□ -2
VSIG1-201ENST00000217957 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
VSIG1-201ENST00000217957 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
VSIG1-201ENST00000217957 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
VSIG1-201ENST00000217957 MT1EP04732 61 aa2.5□□□□□ -2.01
VSIG1-201ENST00000217957 MT1LQ93083 61 aa2.47□□□□□ -2.01
VSIG1-201ENST00000217957 MT1GP13640 62 aa2.43□□□□□ -2.02
VSIG1-201ENST00000217957 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.03
VSIG1-201ENST00000217957 KRTAP19-3Q7Z4W3 81 aa2.39□□□□□ -2.03
VSIG1-201ENST00000217957 MT1MQ8N339 61 aa2.37□□□□□ -2.03
VSIG1-201ENST00000217957 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
VSIG1-201ENST00000217957 KRTAP5-1Q6L8H4 278 aa2.31□□□□□ -2.04
VSIG1-201ENST00000217957 KRTAP5-5Q701N2 237 aaPredicted RBP2.26□□□□□ -2.05
VSIG1-201ENST00000217957 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
VSIG1-201ENST00000217957 KRTAP20-2Q3LI61 65 aa2.18□□□□□ -2.06
VSIG1-201ENST00000217957 KRTAP6-1Q3LI64 71 aa2.16□□□□□ -2.06
VSIG1-201ENST00000217957 MT4P47944 62 aa2.13□□□□□ -2.07
VSIG1-201ENST00000217957 PRM1P04553 51 aa2.13□□□□□ -2.07
VSIG1-201ENST00000217957 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
VSIG1-201ENST00000217957 MT1AP04731 61 aa2.02□□□□□ -2.09
VSIG1-201ENST00000217957 KRTAP6-2Q3LI66 62 aa2.01□□□□□ -2.09
VSIG1-201ENST00000217957 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
VSIG1-201ENST00000217957 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
VSIG1-201ENST00000217957 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
VSIG1-201ENST00000217957 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 37.8 ms