RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 KRTAP2-3P0C7H8 128 aa3.37□□□□□ -1.87
TUBB1-201ENST00000217133 KRTAP2-4Q9BYR9 128 aa3.37□□□□□ -1.87
TUBB1-201ENST00000217133 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
TUBB1-201ENST00000217133 MUC12Q9UKN1 5478 aa3.32□□□□□ -1.88
TUBB1-201ENST00000217133 KRTAP9-6A0A140TA67 174 aa3.31□□□□□ -1.88
TUBB1-201ENST00000217133 KRTAP19-7Q3SYF9 63 aa3.31□□□□□ -1.88
TUBB1-201ENST00000217133 MT1LQ93083 61 aa3.25□□□□□ -1.89
TUBB1-201ENST00000217133 MDN1Q9NU22 5596 aa3.22□□□□□ -1.89
TUBB1-201ENST00000217133 MT1EP04732 61 aa3.22□□□□□ -1.89
TUBB1-201ENST00000217133 DSTQ03001 7570 aaKnown RBP3.2□□□□□ -1.9
TUBB1-201ENST00000217133 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.18□□□□□ -1.9
TUBB1-201ENST00000217133 SPRR2FQ96RM1 72 aa3.17□□□□□ -1.9
TUBB1-201ENST00000217133 LOC100996750A0A140TA64 210 aa3.13□□□□□ -1.91
TUBB1-201ENST00000217133 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
TUBB1-201ENST00000217133 MT1GP13640 62 aa3.11□□□□□ -1.91
TUBB1-201ENST00000217133 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
TUBB1-201ENST00000217133 KRTAP4-6Q9BYQ5 205 aa3.09□□□□□ -1.92
TUBB1-201ENST00000217133 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
TUBB1-201ENST00000217133 KRTAP9-7A8MTY7 169 aa3.05□□□□□ -1.92
TUBB1-201ENST00000217133 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
TUBB1-201ENST00000217133 MT1MQ8N339 61 aa3□□□□□ -1.93
TUBB1-201ENST00000217133 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
TUBB1-201ENST00000217133 KRTAP6-3Q3LI67 103 aa2.99□□□□□ -1.93
TUBB1-201ENST00000217133 SPRR2EP22531 72 aa2.99□□□□□ -1.93
TUBB1-201ENST00000217133 SPRR2BP35325 72 aa2.99□□□□□ -1.93
TUBB1-201ENST00000217133 SPRR2AP35326 72 aa2.99□□□□□ -1.93
TUBB1-201ENST00000217133 LCE1AQ5T7P2 110 aa2.98□□□□□ -1.93
TUBB1-201ENST00000217133 KRTAP19-3Q7Z4W3 81 aa2.98□□□□□ -1.93
TUBB1-201ENST00000217133 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
TUBB1-201ENST00000217133 LCE3BQ5TA77 95 aa2.95□□□□□ -1.94
TUBB1-201ENST00000217133 NEBP20929 6669 aa2.94□□□□□ -1.94
TUBB1-201ENST00000217133 LCE5AQ5TCM9 118 aa2.92□□□□□ -1.94
TUBB1-201ENST00000217133 KRTAP4-9Q9BYQ8 210 aa2.91□□□□□ -1.94
TUBB1-201ENST00000217133 SPRR2DP22532 72 aa2.87□□□□□ -1.95
TUBB1-201ENST00000217133 LCE4AQ5TA78 99 aa2.87□□□□□ -1.95
TUBB1-201ENST00000217133 KRTAP9-4Q9BYQ2 154 aa2.85□□□□□ -1.95
TUBB1-201ENST00000217133 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
TUBB1-201ENST00000217133 KRTAP9-9Q9BYP9 154 aa2.81□□□□□ -1.96
TUBB1-201ENST00000217133 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
TUBB1-201ENST00000217133 MT1AP04731 61 aa2.8□□□□□ -1.96
TUBB1-201ENST00000217133 PRM1P04553 51 aa2.78□□□□□ -1.96
TUBB1-201ENST00000217133 KRTAP6-1Q3LI64 71 aa2.77□□□□□ -1.97
TUBB1-201ENST00000217133 KRTAP5-5Q701N2 237 aaPredicted RBP2.71□□□□□ -1.98
TUBB1-201ENST00000217133 LCE1DQ5T752 114 aa2.68□□□□□ -1.98
TUBB1-201ENST00000217133 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
TUBB1-201ENST00000217133 KRTAP20-1Q3LI63 56 aa2.65□□□□□ -1.98
TUBB1-201ENST00000217133 KRTAP6-2Q3LI66 62 aa2.62□□□□□ -1.99
TUBB1-201ENST00000217133 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
TUBB1-201ENST00000217133 KRTAP2-2Q9BYT5 123 aa2.59□□□□□ -1.99
TUBB1-201ENST00000217133 MT4P47944 62 aa2.59□□□□□ -1.99
TUBB1-201ENST00000217133 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
TUBB1-201ENST00000217133 LCE1FQ5T754 118 aa2.54□□□□□ -2
TUBB1-201ENST00000217133 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
TUBB1-201ENST00000217133 KRTAP4-11Q9BYQ6 195 aa2.52□□□□□ -2.01
TUBB1-201ENST00000217133 KRTAP5-4Q6L8H1 288 aa2.48□□□□□ -2.01
TUBB1-201ENST00000217133 MT3P25713 68 aa2.47□□□□□ -2.01
TUBB1-201ENST00000217133 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
TUBB1-201ENST00000217133 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.02
TUBB1-201ENST00000217133 KRTAP20-2Q3LI61 65 aa2.38□□□□□ -2.03
TUBB1-201ENST00000217133 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
TUBB1-201ENST00000217133 KRTAP5-3Q6L8H2 238 aa2.27□□□□□ -2.05
TUBB1-201ENST00000217133 KRTAP5-2Q701N4 177 aa2.22□□□□□ -2.05
TUBB1-201ENST00000217133 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
TUBB1-201ENST00000217133 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
TUBB1-201ENST00000217133 MUC5ACP98088 5654 aa2.08□□□□□ -2.08
TUBB1-201ENST00000217133 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
TUBB1-201ENST00000217133 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
TUBB1-201ENST00000217133 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
TUBB1-201ENST00000217133 KRTAP5-1Q6L8H4 278 aa2□□□□□ -2.09
TUBB1-201ENST00000217133 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
TUBB1-201ENST00000217133 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
TUBB1-201ENST00000217133 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
TUBB1-201ENST00000217133 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
TUBB1-201ENST00000217133 KRTAP4-4Q9BYR3 166 aa1.7□□□□□ -2.14
TUBB1-201ENST00000217133 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
TUBB1-201ENST00000217133 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
TUBB1-201ENST00000217133 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 142.7 ms