RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 C10orf95Q9H7T3 257 aa5.78□□□□□ -1.48
UPK3A-201ENST00000216211 PRAC1Q96KF2 57 aa5.76□□□□□ -1.49
UPK3A-201ENST00000216211 GPR98Q8WXG9 6306 aa5.75□□□□□ -1.49
UPK3A-201ENST00000216211 DSTQ03001 7570 aaKnown RBP5.71□□□□□ -1.49
UPK3A-201ENST00000216211 KRTAP25-1Q3LHN0 102 aa5.67□□□□□ -1.5
UPK3A-201ENST00000216211 KRTAP19-7Q3SYF9 63 aa5.64□□□□□ -1.51
UPK3A-201ENST00000216211 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
UPK3A-201ENST00000216211 MT1EP04732 61 aa5.6□□□□□ -1.51
UPK3A-201ENST00000216211 TNP1P09430 55 aa5.58□□□□□ -1.52
UPK3A-201ENST00000216211 KRTAP19-3Q7Z4W3 81 aa5.58□□□□□ -1.52
UPK3A-201ENST00000216211 KRTAP4-9Q9BYQ8 210 aa5.55□□□□□ -1.52
UPK3A-201ENST00000216211 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
UPK3A-201ENST00000216211 PP632Q6XCG6 107 aa5.48□□□□□ -1.53
UPK3A-201ENST00000216211 KRTAP19-5Q3LI72 72 aa5.46□□□□□ -1.54
UPK3A-201ENST00000216211 MT1GP13640 62 aa5.42□□□□□ -1.54
UPK3A-201ENST00000216211 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
UPK3A-201ENST00000216211 HMCN1Q96RW7 5635 aa5.35□□□□□ -1.55
UPK3A-201ENST00000216211 MT1MQ8N339 61 aa5.35□□□□□ -1.55
UPK3A-201ENST00000216211 LCE3AQ5TA76 89 aa5.32□□□□□ -1.56
UPK3A-201ENST00000216211 LCE4AQ5TA78 99 aa5.32□□□□□ -1.56
UPK3A-201ENST00000216211 MT1LQ93083 61 aa5.32□□□□□ -1.56
UPK3A-201ENST00000216211 AHNAK2Q8IVF2 5795 aa5.32□□□□□ -1.56
UPK3A-201ENST00000216211 MT4P47944 62 aa5.31□□□□□ -1.56
UPK3A-201ENST00000216211 KRTAP4-3Q9BYR4 195 aa5.25□□□□□ -1.57
UPK3A-201ENST00000216211 KRTAP5-4Q6L8H1 288 aa5.19□□□□□ -1.58
UPK3A-201ENST00000216211 KRTAP4-6Q9BYQ5 205 aa5.14□□□□□ -1.59
UPK3A-201ENST00000216211 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
UPK3A-201ENST00000216211 KRTAP5-10Q6L8G5 202 aa5.08□□□□□ -1.6
UPK3A-201ENST00000216211 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
UPK3A-201ENST00000216211 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
UPK3A-201ENST00000216211 KRTAP5-3Q6L8H2 238 aa4.93□□□□□ -1.62
UPK3A-201ENST00000216211 KRTAP20-2Q3LI61 65 aa4.92□□□□□ -1.62
UPK3A-201ENST00000216211 KRTAP5-7Q6L8G8 165 aa4.92□□□□□ -1.62
UPK3A-201ENST00000216211 KRTAP5-5Q701N2 237 aaPredicted RBP4.91□□□□□ -1.62
UPK3A-201ENST00000216211 SPRR5A0A1B0GTR4 108 aa4.89□□□□□ -1.63
UPK3A-201ENST00000216211 KRTAP19-4Q3LI73 84 aa4.88□□□□□ -1.63
UPK3A-201ENST00000216211 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
UPK3A-201ENST00000216211 LOC100996750A0A140TA64 210 aa4.82□□□□□ -1.64
UPK3A-201ENST00000216211 KRTAP12-4P60329 112 aa4.82□□□□□ -1.64
UPK3A-201ENST00000216211 LCE3CQ5T5A8 94 aa4.8□□□□□ -1.64
UPK3A-201ENST00000216211 LUZP6Q538Z0 58 aa4.7□□□□□ -1.66
UPK3A-201ENST00000216211 NDUFAF8A1L188 74 aa4.61□□□□□ -1.67
UPK3A-201ENST00000216211 KRTAP9-6A8MVA2 160 aa4.52□□□□□ -1.69
UPK3A-201ENST00000216211 MT1AP04731 61 aa4.52□□□□□ -1.69
UPK3A-201ENST00000216211 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
UPK3A-201ENST00000216211 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
UPK3A-201ENST00000216211 KRTAP5-2Q701N4 177 aa4.51□□□□□ -1.69
UPK3A-201ENST00000216211 AHNAKQ09666 5890 aaKnown RBP4.46□□□□□ -1.7
UPK3A-201ENST00000216211 MUC5BQ9HC84 5762 aaPredicted RBP4.43□□□□□ -1.7
UPK3A-201ENST00000216211 KRTAP5-8O75690 187 aa4.39□□□□□ -1.71
UPK3A-201ENST00000216211 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
UPK3A-201ENST00000216211 MUC5ACP98088 5654 aa4.37□□□□□ -1.71
UPK3A-201ENST00000216211 KRTAP6-2Q3LI66 62 aa4.35□□□□□ -1.71
UPK3A-201ENST00000216211 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.71
UPK3A-201ENST00000216211 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
UPK3A-201ENST00000216211 MT3P25713 68 aa4.14□□□□□ -1.75
UPK3A-201ENST00000216211 H3BS24 57 aa4.11□□□□□ -1.75
UPK3A-201ENST00000216211 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
UPK3A-201ENST00000216211 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
UPK3A-201ENST00000216211 INE1O15225 51 aa3.86□□□□□ -1.79
UPK3A-201ENST00000216211 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
UPK3A-201ENST00000216211 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
UPK3A-201ENST00000216211 KRTAP4-2Q9BYR5 136 aa3.66□□□□□ -1.82
UPK3A-201ENST00000216211 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
UPK3A-201ENST00000216211 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
UPK3A-201ENST00000216211 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
UPK3A-201ENST00000216211 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
UPK3A-201ENST00000216211 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
UPK3A-201ENST00000216211 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
UPK3A-201ENST00000216211 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
UPK3A-201ENST00000216211 PRM1P04553 51 aa3.07□□□□□ -1.92
UPK3A-201ENST00000216211 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
UPK3A-201ENST00000216211 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
UPK3A-201ENST00000216211 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
UPK3A-201ENST00000216211 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
UPK3A-201ENST00000216211 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
UPK3A-201ENST00000216211 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 97.4 ms