RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 MT1BP07438 61 aa2.27□□□□□ -2.05
CEACAM1-201ENST00000161559 KRTAP8-1Q8IUC2 63 aa2.26□□□□□ -2.05
CEACAM1-201ENST00000161559 KRTAP12-3P60328 96 aa2.25□□□□□ -2.05
CEACAM1-201ENST00000161559 KRTAP10-12P60413 245 aa2.25□□□□□ -2.05
CEACAM1-201ENST00000161559 FSIP2Q5CZC0 6907 aa2.24□□□□□ -2.05
CEACAM1-201ENST00000161559 KRTAP19-8Q3LI54 63 aa2.21□□□□□ -2.06
CEACAM1-201ENST00000161559 KRTAP9-6A8MVA2 160 aa2.18□□□□□ -2.06
CEACAM1-201ENST00000161559 KRTAP19-5Q3LI72 72 aa2.18□□□□□ -2.06
CEACAM1-201ENST00000161559 KRTAP5-3Q6L8H2 238 aa2.17□□□□□ -2.06
CEACAM1-201ENST00000161559 CRCT1Q9UGL9 99 aa2.17□□□□□ -2.06
CEACAM1-201ENST00000161559 SSPOA2VEC9 5147 aa2.13□□□□□ -2.07
CEACAM1-201ENST00000161559 LCE3CQ5T5A8 94 aa2.12□□□□□ -2.07
CEACAM1-201ENST00000161559 DSTQ03001 7570 aaKnown RBP2.1□□□□□ -2.07
CEACAM1-201ENST00000161559 MUC12Q9UKN1 5478 aa2.07□□□□□ -2.08
CEACAM1-201ENST00000161559 FCGBPQ9Y6R7 5405 aaPredicted RBP2.06□□□□□ -2.08
CEACAM1-201ENST00000161559 KRTAP19-7Q3SYF9 63 aa2.04□□□□□ -2.08
CEACAM1-201ENST00000161559 KRTAP19-6Q3LI70 58 aa2.02□□□□□ -2.09
CEACAM1-201ENST00000161559 KRTAP4-3Q9BYR4 195 aa2.01□□□□□ -2.09
CEACAM1-201ENST00000161559 KRTAP2-3P0C7H8 128 aa2□□□□□ -2.09
CEACAM1-201ENST00000161559 KRTAP2-4Q9BYR9 128 aa2□□□□□ -2.09
CEACAM1-201ENST00000161559 KRTAP2-1Q9BYU5 128 aa2□□□□□ -2.09
CEACAM1-201ENST00000161559 LCE1AQ5T7P2 110 aa2□□□□□ -2.09
CEACAM1-201ENST00000161559 SPRR2FQ96RM1 72 aa1.99□□□□□ -2.09
CEACAM1-201ENST00000161559 MT1LQ93083 61 aa1.96□□□□□ -2.1
CEACAM1-201ENST00000161559 SYNE1Q8NF91 8797 aaKnown RBP1.96□□□□□ -2.1
CEACAM1-201ENST00000161559 KRTAP2-2Q9BYT5 123 aa1.96□□□□□ -2.1
CEACAM1-201ENST00000161559 KRTAP6-3Q3LI67 103 aa1.96□□□□□ -2.1
CEACAM1-201ENST00000161559 MT1EP04732 61 aa1.94□□□□□ -2.1
CEACAM1-201ENST00000161559 OBSCNQ5VST9 7968 aa1.94□□□□□ -2.1
CEACAM1-201ENST00000161559 MT3P25713 68 aa1.94□□□□□ -2.1
CEACAM1-201ENST00000161559 MT1GP13640 62 aa1.92□□□□□ -2.1
CEACAM1-201ENST00000161559 SPRR2EP22531 72 aa1.9□□□□□ -2.11
CEACAM1-201ENST00000161559 SPRR2BP35325 72 aa1.9□□□□□ -2.11
CEACAM1-201ENST00000161559 SPRR2AP35326 72 aa1.9□□□□□ -2.11
CEACAM1-201ENST00000161559 SYNE2Q8WXH0 6885 aaKnown RBP1.89□□□□□ -2.11
CEACAM1-201ENST00000161559 MACF1Q9UPN3 7388 aaKnown RBP1.89□□□□□ -2.11
CEACAM1-201ENST00000161559 NEBP20929 6669 aa1.87□□□□□ -2.11
CEACAM1-201ENST00000161559 KRTAP12-4P60329 112 aa1.86□□□□□ -2.11
CEACAM1-201ENST00000161559 SPRR2DP22532 72 aa1.83□□□□□ -2.12
CEACAM1-201ENST00000161559 KRTAP20-1Q3LI63 56 aa1.83□□□□□ -2.12
CEACAM1-201ENST00000161559 MDN1Q9NU22 5596 aa1.83□□□□□ -2.12
CEACAM1-201ENST00000161559 MT1MQ8N339 61 aa1.81□□□□□ -2.12
CEACAM1-201ENST00000161559 KRTAP5-9P26371 169 aa1.78□□□□□ -2.12
CEACAM1-201ENST00000161559 KRTAP19-3Q7Z4W3 81 aa1.78□□□□□ -2.12
CEACAM1-201ENST00000161559 LCE1FQ5T754 118 aa1.77□□□□□ -2.13
CEACAM1-201ENST00000161559 KRTAP6-1Q3LI64 71 aa1.72□□□□□ -2.13
CEACAM1-201ENST00000161559 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
CEACAM1-201ENST00000161559 HMCN1Q96RW7 5635 aa1.69□□□□□ -2.14
CEACAM1-201ENST00000161559 KRTAP5-5Q701N2 237 aaPredicted RBP1.69□□□□□ -2.14
CEACAM1-201ENST00000161559 PRM1P04553 51 aa1.68□□□□□ -2.14
CEACAM1-201ENST00000161559 LCE3EQ5T5B0 92 aa1.67□□□□□ -2.14
CEACAM1-201ENST00000161559 LCE1EQ5T753 118 aa1.67□□□□□ -2.14
CEACAM1-201ENST00000161559 LCE3DQ9BYE3 92 aa1.65□□□□□ -2.15
CEACAM1-201ENST00000161559 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.15
CEACAM1-201ENST00000161559 GPR98Q8WXG9 6306 aa1.64□□□□□ -2.15
CEACAM1-201ENST00000161559 MT4P47944 62 aa1.62□□□□□ -2.15
CEACAM1-201ENST00000161559 MT1AP04731 61 aa1.6□□□□□ -2.15
CEACAM1-201ENST00000161559 KRTAP6-2Q3LI66 62 aa1.59□□□□□ -2.15
CEACAM1-201ENST00000161559 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.16
CEACAM1-201ENST00000161559 KRTAP5-10Q6L8G5 202 aa1.58□□□□□ -2.16
CEACAM1-201ENST00000161559 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.52□□□□□ -2.17
CEACAM1-201ENST00000161559 AHNAK2Q8IVF2 5795 aa1.49□□□□□ -2.17
CEACAM1-201ENST00000161559 KRTAP5-1Q6L8H4 278 aa1.49□□□□□ -2.17
CEACAM1-201ENST00000161559 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
CEACAM1-201ENST00000161559 KRTAP5-4Q6L8H1 288 aa1.41□□□□□ -2.18
CEACAM1-201ENST00000161559 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
CEACAM1-201ENST00000161559 KRTAP20-2Q3LI61 65 aa1.4□□□□□ -2.18
CEACAM1-201ENST00000161559 KRTAP4-4Q9BYR3 166 aa1.37□□□□□ -2.19
CEACAM1-201ENST00000161559 MUC5ACP98088 5654 aa1.36□□□□□ -2.19
CEACAM1-201ENST00000161559 LCE1BQ5T7P3 118 aa1.31□□□□□ -2.2
CEACAM1-201ENST00000161559 KRTAP5-2Q701N4 177 aa1.25□□□□□ -2.21
CEACAM1-201ENST00000161559 KRTAP5-8O75690 187 aa1.19□□□□□ -2.22
CEACAM1-201ENST00000161559 LCE1CQ5T751 118 aa1.11□□□□□ -2.23
CEACAM1-201ENST00000161559 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
CEACAM1-201ENST00000161559 KRTAP21-2Q3LI59 83 aa1.08□□□□□ -2.24
CEACAM1-201ENST00000161559 PHGR1C9JFL3 82 aa0.84□□□□□ -2.27
CEACAM1-201ENST00000161559 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 103.4 ms