RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 SPRR2FQ96RM1 72 aa8.03□□□□□ -1.12
HOXC8-201ENST00000040584 MT1EP04732 61 aa8.01□□□□□ -1.13
HOXC8-201ENST00000040584 KRTAP5-9P26371 169 aa7.98□□□□□ -1.13
HOXC8-201ENST00000040584 MUC12Q9UKN1 5478 aa7.97□□□□□ -1.13
HOXC8-201ENST00000040584 KRTAP6-3Q3LI67 103 aa7.94□□□□□ -1.14
HOXC8-201ENST00000040584 KRTAP9-7A8MTY7 169 aa7.83□□□□□ -1.16
HOXC8-201ENST00000040584 MT1LQ93083 61 aa7.82□□□□□ -1.16
HOXC8-201ENST00000040584 LCE3CQ5T5A8 94 aa7.81□□□□□ -1.16
HOXC8-201ENST00000040584 KRTAP19-4Q3LI73 84 aa7.79□□□□□ -1.16
HOXC8-201ENST00000040584 MDN1Q9NU22 5596 aa7.79□□□□□ -1.16
HOXC8-201ENST00000040584 KRTAP19-3Q7Z4W3 81 aa7.74□□□□□ -1.17
HOXC8-201ENST00000040584 LCE1AQ5T7P2 110 aa7.7□□□□□ -1.18
HOXC8-201ENST00000040584 INE1O15225 51 aa7.67□□□□□ -1.18
HOXC8-201ENST00000040584 SPRR2EP22531 72 aa7.67□□□□□ -1.18
HOXC8-201ENST00000040584 SPRR2BP35325 72 aa7.67□□□□□ -1.18
HOXC8-201ENST00000040584 SPRR2AP35326 72 aa7.67□□□□□ -1.18
HOXC8-201ENST00000040584 MT1GP13640 62 aa7.64□□□□□ -1.19
HOXC8-201ENST00000040584 LCE5AQ5TCM9 118 aa7.63□□□□□ -1.19
HOXC8-201ENST00000040584 KRTAP4-7Q9BYR0 210 aa7.6□□□□□ -1.19
HOXC8-201ENST00000040584 MT1MQ8N339 61 aa7.56□□□□□ -1.2
HOXC8-201ENST00000040584 NEBP20929 6669 aa7.53□□□□□ -1.2
HOXC8-201ENST00000040584 KRTAP4-3Q9BYR4 195 aa7.45□□□□□ -1.22
HOXC8-201ENST00000040584 SPRR2DP22532 72 aa7.39□□□□□ -1.23
HOXC8-201ENST00000040584 DSTQ03001 7570 aaKnown RBP7.34□□□□□ -1.23
HOXC8-201ENST00000040584 KRTAP9-6A8MVA2 160 aa7.34□□□□□ -1.23
HOXC8-201ENST00000040584 KRTAP2-3P0C7H8 128 aa7.23□□□□□ -1.25
HOXC8-201ENST00000040584 KRTAP2-4Q9BYR9 128 aa7.23□□□□□ -1.25
HOXC8-201ENST00000040584 KRTAP2-1Q9BYU5 128 aa7.23□□□□□ -1.25
HOXC8-201ENST00000040584 LCE3BQ5TA77 95 aa7.19□□□□□ -1.26
HOXC8-201ENST00000040584 KRTAP9-9Q9BYP9 154 aa7.13□□□□□ -1.27
HOXC8-201ENST00000040584 KRTAP9-4Q9BYQ2 154 aa7.13□□□□□ -1.27
HOXC8-201ENST00000040584 KRTAP4-12Q9BQ66 201 aa7.09□□□□□ -1.27
HOXC8-201ENST00000040584 KRTAP5-3Q6L8H2 238 aa7.01□□□□□ -1.29
HOXC8-201ENST00000040584 KRTAP20-1Q3LI63 56 aa6.92□□□□□ -1.3
HOXC8-201ENST00000040584 KRTAP5-5Q701N2 237 aaPredicted RBP6.83□□□□□ -1.32
HOXC8-201ENST00000040584 KRTAP2-2Q9BYT5 123 aa6.82□□□□□ -1.32
HOXC8-201ENST00000040584 LCE1DQ5T752 114 aa6.77□□□□□ -1.33
HOXC8-201ENST00000040584 KRTAP4-9Q9BYQ8 210 aa6.66□□□□□ -1.34
HOXC8-201ENST00000040584 KRTAP4-2Q9BYR5 136 aa6.66□□□□□ -1.34
HOXC8-201ENST00000040584 MT1AP04731 61 aa6.63□□□□□ -1.35
HOXC8-201ENST00000040584 KRTAP5-4Q6L8H1 288 aa6.61□□□□□ -1.35
HOXC8-201ENST00000040584 KRTAP6-1Q3LI64 71 aa6.6□□□□□ -1.35
HOXC8-201ENST00000040584 SYNE1Q8NF91 8797 aaKnown RBP6.53□□□□□ -1.36
HOXC8-201ENST00000040584 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
HOXC8-201ENST00000040584 MT4P47944 62 aa6.45□□□□□ -1.38
HOXC8-201ENST00000040584 KRTAP12-4P60329 112 aa6.39□□□□□ -1.39
HOXC8-201ENST00000040584 KRTAP4-11Q9BYQ6 195 aa6.32□□□□□ -1.4
HOXC8-201ENST00000040584 HMCN1Q96RW7 5635 aa6.29□□□□□ -1.4
HOXC8-201ENST00000040584 KRTAP20-2Q3LI61 65 aa6.21□□□□□ -1.42
HOXC8-201ENST00000040584 KRTAP6-2Q3LI66 62 aa6.13□□□□□ -1.43
HOXC8-201ENST00000040584 MT3P25713 68 aa6.02□□□□□ -1.45
HOXC8-201ENST00000040584 LCE3DQ9BYE3 92 aa6.01□□□□□ -1.45
HOXC8-201ENST00000040584 KRTAP5-2Q701N4 177 aa5.96□□□□□ -1.45
HOXC8-201ENST00000040584 LCE3EQ5T5B0 92 aa5.94□□□□□ -1.46
HOXC8-201ENST00000040584 OBSCNQ5VST9 7968 aa5.69□□□□□ -1.5
HOXC8-201ENST00000040584 AHNAK2Q8IVF2 5795 aa5.67□□□□□ -1.5
HOXC8-201ENST00000040584 PRM1P04553 51 aa5.51□□□□□ -1.53
HOXC8-201ENST00000040584 KRTAP5-10Q6L8G5 202 aa5.38□□□□□ -1.55
HOXC8-201ENST00000040584 GPR98Q8WXG9 6306 aa5.32□□□□□ -1.56
HOXC8-201ENST00000040584 LCE1EQ5T753 118 aa5.27□□□□□ -1.57
HOXC8-201ENST00000040584 KRTAP5-8O75690 187 aa5.24□□□□□ -1.57
HOXC8-201ENST00000040584 KRTAP5-1Q6L8H4 278 aa5.2□□□□□ -1.58
HOXC8-201ENST00000040584 MUC5ACP98088 5654 aa5.04□□□□□ -1.6
HOXC8-201ENST00000040584 KRTAP5-7Q6L8G8 165 aa5□□□□□ -1.61
HOXC8-201ENST00000040584 LCE1BQ5T7P3 118 aa4.99□□□□□ -1.61
HOXC8-201ENST00000040584 LCE1CQ5T751 118 aa4.91□□□□□ -1.62
HOXC8-201ENST00000040584 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.82□□□□□ -1.64
HOXC8-201ENST00000040584 MUC5BQ9HC84 5762 aaPredicted RBP4.56□□□□□ -1.68
HOXC8-201ENST00000040584 AHNAKQ09666 5890 aaKnown RBP4.35□□□□□ -1.71
HOXC8-201ENST00000040584 KRTAP5-11Q6L8G4 156 aa4.35□□□□□ -1.71
HOXC8-201ENST00000040584 KRTAP21-2Q3LI59 83 aa4.32□□□□□ -1.72
HOXC8-201ENST00000040584 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
HOXC8-201ENST00000040584 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.78
HOXC8-201ENST00000040584 PHGR1C9JFL3 82 aa3.75□□□□□ -1.81
HOXC8-201ENST00000040584 KRTAP21-1Q3LI58 79 aa3.54□□□□□ -1.84
HOXC8-201ENST00000040584 MUC19Q7Z5P9 8384 aa3.42□□□□□ -1.86
HOXC8-201ENST00000040584 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 12.6 ms