RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 KRTAP4-11Q9BYQ6 195 aa4.51□□□□□ -1.69
SYPL1-201ENST00000011473 LCE3AQ5TA76 89 aa4.5□□□□□ -1.69
SYPL1-201ENST00000011473 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
SYPL1-201ENST00000011473 KRTAP19-5Q3LI72 72 aa4.48□□□□□ -1.69
SYPL1-201ENST00000011473 CDC42SE1Q9NRR8 79 aa4.46□□□□□ -1.69
SYPL1-201ENST00000011473 MT1EP04732 61 aa4.46□□□□□ -1.7
SYPL1-201ENST00000011473 SPRR2DP22532 72 aa4.4□□□□□ -1.7
SYPL1-201ENST00000011473 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.71
SYPL1-201ENST00000011473 KRTAP20-1Q3LI63 56 aa4.39□□□□□ -1.71
SYPL1-201ENST00000011473 KRTAP19-3Q7Z4W3 81 aa4.36□□□□□ -1.71
SYPL1-201ENST00000011473 LCE5AQ5TCM9 118 aa4.34□□□□□ -1.71
SYPL1-201ENST00000011473 ROMO1P60602 79 aa4.33□□□□□ -1.72
SYPL1-201ENST00000011473 KRTAP2-3P0C7H8 128 aa4.32□□□□□ -1.72
SYPL1-201ENST00000011473 KRTAP2-4Q9BYR9 128 aa4.32□□□□□ -1.72
SYPL1-201ENST00000011473 KRTAP12-3P60328 96 aa4.31□□□□□ -1.72
SYPL1-201ENST00000011473 MT1LQ93083 61 aa4.3□□□□□ -1.72
SYPL1-201ENST00000011473 DSTQ03001 7570 aaKnown RBP4.3□□□□□ -1.72
SYPL1-201ENST00000011473 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
SYPL1-201ENST00000011473 MT1GP13640 62 aa4.26□□□□□ -1.73
SYPL1-201ENST00000011473 MT1MQ8N339 61 aa4.22□□□□□ -1.73
SYPL1-201ENST00000011473 PP632Q6XCG6 107 aa4.22□□□□□ -1.73
SYPL1-201ENST00000011473 KRTAP2-2Q9BYT5 123 aa4.21□□□□□ -1.74
SYPL1-201ENST00000011473 KRTAP2-1Q9BYU5 128 aa4.21□□□□□ -1.74
SYPL1-201ENST00000011473 KRTAP23-1A1A580 65 aa4.2□□□□□ -1.74
SYPL1-201ENST00000011473 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
SYPL1-201ENST00000011473 H3BS24 57 aa4.15□□□□□ -1.75
SYPL1-201ENST00000011473 LCE4AQ5TA78 99 aa4.11□□□□□ -1.75
SYPL1-201ENST00000011473 KRTAP15-1Q3LI76 137 aa4.09□□□□□ -1.75
SYPL1-201ENST00000011473 PMAIP1Q13794 54 aa4.03□□□□□ -1.76
SYPL1-201ENST00000011473 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
SYPL1-201ENST00000011473 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
SYPL1-201ENST00000011473 PRO0628Q9UI54 55 aa3.91□□□□□ -1.78
SYPL1-201ENST00000011473 MT4P47944 62 aa3.88□□□□□ -1.79
SYPL1-201ENST00000011473 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
SYPL1-201ENST00000011473 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
SYPL1-201ENST00000011473 KRTAP5-5Q701N2 237 aaPredicted RBP3.85□□□□□ -1.79
SYPL1-201ENST00000011473 HMCN1Q96RW7 5635 aa3.81□□□□□ -1.8
SYPL1-201ENST00000011473 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
SYPL1-201ENST00000011473 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
SYPL1-201ENST00000011473 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
SYPL1-201ENST00000011473 KRTAP12-4P60329 112 aa3.66□□□□□ -1.82
SYPL1-201ENST00000011473 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.83
SYPL1-201ENST00000011473 KRTAP6-1Q3LI64 71 aa3.65□□□□□ -1.83
SYPL1-201ENST00000011473 MT1AP04731 61 aa3.64□□□□□ -1.83
SYPL1-201ENST00000011473 SPRR5A0A1B0GTR4 108 aa3.61□□□□□ -1.83
SYPL1-201ENST00000011473 A0A0A0MQY5 61 aa3.56□□□□□ -1.84
SYPL1-201ENST00000011473 AHNAK2Q8IVF2 5795 aa3.53□□□□□ -1.84
SYPL1-201ENST00000011473 GPR98Q8WXG9 6306 aa3.52□□□□□ -1.85
SYPL1-201ENST00000011473 KRTAP6-2Q3LI66 62 aa3.44□□□□□ -1.86
SYPL1-201ENST00000011473 KRTAP5-10Q6L8G5 202 aa3.43□□□□□ -1.86
SYPL1-201ENST00000011473 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
SYPL1-201ENST00000011473 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
SYPL1-201ENST00000011473 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
SYPL1-201ENST00000011473 MT3P25713 68 aa3.31□□□□□ -1.88
SYPL1-201ENST00000011473 KRTAP5-7Q6L8G8 165 aa3.24□□□□□ -1.89
SYPL1-201ENST00000011473 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
SYPL1-201ENST00000011473 LUZP6Q538Z0 58 aa3.16□□□□□ -1.9
SYPL1-201ENST00000011473 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
SYPL1-201ENST00000011473 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
SYPL1-201ENST00000011473 LCE1EQ5T753 118 aa2.96□□□□□ -1.94
SYPL1-201ENST00000011473 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
SYPL1-201ENST00000011473 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
SYPL1-201ENST00000011473 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.95
SYPL1-201ENST00000011473 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
SYPL1-201ENST00000011473 NDUFAF8A1L188 74 aa2.82□□□□□ -1.96
SYPL1-201ENST00000011473 AHNAKQ09666 5890 aaKnown RBP2.79□□□□□ -1.96
SYPL1-201ENST00000011473 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
SYPL1-201ENST00000011473 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
SYPL1-201ENST00000011473 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
SYPL1-201ENST00000011473 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
SYPL1-201ENST00000011473 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
SYPL1-201ENST00000011473 PRM1P04553 51 aa2.26□□□□□ -2.05
SYPL1-201ENST00000011473 INE1O15225 51 aa2.21□□□□□ -2.06
SYPL1-201ENST00000011473 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
SYPL1-201ENST00000011473 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.09
SYPL1-201ENST00000011473 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
SYPL1-201ENST00000011473 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 8.4 ms