RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 H1FX-AS1Q4G0G2 97 aa7.26□□□□□ -1.25
PHGDH-233ENST00000642021 COX6B2Q6YFQ2 88 aa7.25□□□□□ -1.25
PHGDH-233ENST00000642021 TNXBP22105 4242 aa7.24□□□□□ -1.25
PHGDH-233ENST00000642021 HSPG2P98160 4391 aa7.23□□□□□ -1.25
PHGDH-233ENST00000642021 MYCBP2O75592 4640 aa7.22□□□□□ -1.25
PHGDH-233ENST00000642021 CRIPTQ9P021 101 aa7.2□□□□□ -1.26
PHGDH-233ENST00000642021 KRTAP21-3Q3LHN1 58 aa7.17□□□□□ -1.26
PHGDH-233ENST00000642021 SPINT4Q6UDR6 99 aa7.16□□□□□ -1.26
PHGDH-233ENST00000642021 DMBT1Q9UGM3 2413 aaPredicted RBP7.16□□□□□ -1.26
PHGDH-233ENST00000642021 KRTAP3-3Q9BYR6 98 aa7.14□□□□□ -1.27
PHGDH-233ENST00000642021 KRTAP10-8P60410 259 aa7.13□□□□□ -1.27
PHGDH-233ENST00000642021 KRTAP10-6P60371 365 aaPredicted RBP7.1□□□□□ -1.27
PHGDH-233ENST00000642021 LUZP6Q538Z0 58 aa7.08□□□□□ -1.28
PHGDH-233ENST00000642021 RPL37P61927 97 aaKnown RBP7.08□□□□□ -1.28
PHGDH-233ENST00000642021 KRTAP13-4Q3LI77 160 aa7.06□□□□□ -1.28
PHGDH-233ENST00000642021 XP32Q5T750 250 aa7.06□□□□□ -1.28
PHGDH-233ENST00000642021 KRTAP3-2Q9BYR7 98 aa7.05□□□□□ -1.28
PHGDH-233ENST00000642021 Q5VSD8 79 aa7.04□□□□□ -1.28
PHGDH-233ENST00000642021 KRTAP17-1Q9BYP8 105 aa7.04□□□□□ -1.28
PHGDH-233ENST00000642021 RYR1P21817 5038 aa7.03□□□□□ -1.28
PHGDH-233ENST00000642021 LPAP08519 4548 aa7.02□□□□□ -1.29
PHGDH-233ENST00000642021 RYR3Q15413 4870 aa7.01□□□□□ -1.29
PHGDH-233ENST00000642021 K7ERS5 55 aa7.01□□□□□ -1.29
PHGDH-233ENST00000642021 KRTAP15-1Q3LI76 137 aa7.01□□□□□ -1.29
PHGDH-233ENST00000642021 A0A0D9SG42 100 aa6.99□□□□□ -1.29
PHGDH-233ENST00000642021 S4R3F8 94 aa6.98□□□□□ -1.29
PHGDH-233ENST00000642021 KIAA1109Q2LD37 5005 aa6.97□□□□□ -1.29
PHGDH-233ENST00000642021 LRP2P98164 4655 aa6.93□□□□□ -1.3
PHGDH-233ENST00000642021 MT1HL1P0DM35 61 aa6.91□□□□□ -1.3
PHGDH-233ENST00000642021 SEC61BP60468 96 aaKnown RBP6.9□□□□□ -1.3
PHGDH-233ENST00000642021 TPRXLQ17RH7 258 aa6.83□□□□□ -1.32
PHGDH-233ENST00000642021 KRTAP12-2P59991 146 aa6.82□□□□□ -1.32
PHGDH-233ENST00000642021 ABCA13Q86UQ4 5058 aa6.79□□□□□ -1.32
PHGDH-233ENST00000642021 C10orf95Q9H7T3 257 aa6.78□□□□□ -1.32
PHGDH-233ENST00000642021 EPPK1P58107 5090 aaKnown RBP6.76□□□□□ -1.33
PHGDH-233ENST00000642021 KRTAP12-1P59990 96 aa6.74□□□□□ -1.33
PHGDH-233ENST00000642021 M0QZ58 72 aa6.64□□□□□ -1.35
PHGDH-233ENST00000642021 KRTAP4-5Q9BYR2 181 aa6.61□□□□□ -1.35
PHGDH-233ENST00000642021 MUC17Q685J3 4493 aa6.57□□□□□ -1.36
PHGDH-233ENST00000642021 J3QL48 77 aa6.55□□□□□ -1.36
PHGDH-233ENST00000642021 LORP23490 312 aaPredicted RBP6.52□□□□□ -1.37
PHGDH-233ENST00000642021 KRTAP4-1Q9BYQ7 146 aa6.5□□□□□ -1.37
PHGDH-233ENST00000642021 R4GN34 69 aa6.5□□□□□ -1.37
PHGDH-233ENST00000642021 MUC2Q02817 5179 aa6.41□□□□□ -1.38
PHGDH-233ENST00000642021 HERC2O95714 4834 aa6.39□□□□□ -1.39
PHGDH-233ENST00000642021 KRTAP19-2Q3LHN2 52 aa6.38□□□□□ -1.39
PHGDH-233ENST00000642021 CAMK2N1Q7Z7J9 78 aa6.31□□□□□ -1.4
PHGDH-233ENST00000642021 PLAC4Q8WY50 150 aa6.27□□□□□ -1.41
PHGDH-233ENST00000642021 FLGP20930 4061 aaPredicted RBP6.21□□□□□ -1.41
PHGDH-233ENST00000642021 BIRC6Q9NR09 4857 aa6.18□□□□□ -1.42
PHGDH-233ENST00000642021 PCLOQ9Y6V0 5065 aa6.16□□□□□ -1.42
PHGDH-233ENST00000642021 HERC1Q15751 4861 aa6.13□□□□□ -1.43
PHGDH-233ENST00000642021 FAT4Q6V0I7 4981 aa6.09□□□□□ -1.44
PHGDH-233ENST00000642021 PP632Q6XCG6 107 aa6.05□□□□□ -1.44
PHGDH-233ENST00000642021 PRO2289Q9P1D8 64 aa6.05□□□□□ -1.44
PHGDH-233ENST00000642021 HMCN2Q8NDA2 5059 aa6.04□□□□□ -1.44
PHGDH-233ENST00000642021 LCE2CQ5TA81 110 aa5.95□□□□□ -1.46
PHGDH-233ENST00000642021 TNP1P09430 55 aa5.94□□□□□ -1.46
PHGDH-233ENST00000642021 RNF213Q63HN8 5207 aa5.89□□□□□ -1.47
PHGDH-233ENST00000642021 KRTAP19-1Q8IUB9 90 aa5.86□□□□□ -1.47
PHGDH-233ENST00000642021 SPRR2GQ9BYE4 73 aa5.84□□□□□ -1.47
PHGDH-233ENST00000642021 UBR4Q5T4S7 5183 aa5.83□□□□□ -1.48
PHGDH-233ENST00000642021 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
PHGDH-233ENST00000642021 M0R2T5 61 aa5.77□□□□□ -1.49
PHGDH-233ENST00000642021 MT1HP80294 61 aa5.76□□□□□ -1.49
PHGDH-233ENST00000642021 SPRR5A0A1B0GTR4 108 aa5.73□□□□□ -1.49
PHGDH-233ENST00000642021 MT1FP04733 61 aa5.72□□□□□ -1.49
PHGDH-233ENST00000642021 MT2AP02795 61 aa5.7□□□□□ -1.5
PHGDH-233ENST00000642021 INE1O15225 51 aa5.69□□□□□ -1.5
PHGDH-233ENST00000642021 KRTAP10-10P60014 251 aa5.68□□□□□ -1.5
PHGDH-233ENST00000642021 LCE3AQ5TA76 89 aa5.67□□□□□ -1.5
PHGDH-233ENST00000642021 KRTAP9-8Q9BYQ0 159 aa5.67□□□□□ -1.5
PHGDH-233ENST00000642021 KRTAP19-8Q3LI54 63 aa5.56□□□□□ -1.52
PHGDH-233ENST00000642021 MT1BP07438 61 aa5.54□□□□□ -1.52
PHGDH-233ENST00000642021 KRTAP10-5P60370 271 aa5.53□□□□□ -1.52
PHGDH-233ENST00000642021 MT1XP80297 61 aa5.52□□□□□ -1.53
PHGDH-233ENST00000642021 KRTAP8-1Q8IUC2 63 aa5.5□□□□□ -1.53
PHGDH-233ENST00000642021 KRTAP9-3Q9BYQ3 159 aa5.41□□□□□ -1.54
PHGDH-233ENST00000642021 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
PHGDH-233ENST00000642021 KRTAP10-12P60413 245 aa5.39□□□□□ -1.55
PHGDH-233ENST00000642021 KRTAP12-3P60328 96 aa5.38□□□□□ -1.55
PHGDH-233ENST00000642021 USH2AO75445 5202 aa5.3□□□□□ -1.56
PHGDH-233ENST00000642021 KMT2DO14686 5537 aa5.24□□□□□ -1.57
PHGDH-233ENST00000642021 LCE2BO14633 110 aa5.21□□□□□ -1.58
PHGDH-233ENST00000642021 KRTAP19-5Q3LI72 72 aa5.16□□□□□ -1.58
PHGDH-233ENST00000642021 KRTAP4-8A0A0G2JLE6 195 aa5.09□□□□□ -1.6
PHGDH-233ENST00000642021 KRTAP4-8Q9BYQ9 185 aa5.09□□□□□ -1.6
PHGDH-233ENST00000642021 LCE3CQ5T5A8 94 aa5.07□□□□□ -1.6
PHGDH-233ENST00000642021 LCE2AQ5TA79 106 aaPredicted RBP5.01□□□□□ -1.61
PHGDH-233ENST00000642021 KRTAP9-6A8MVA2 160 aa4.97□□□□□ -1.61
PHGDH-233ENST00000642021 KRTAP19-7Q3SYF9 63 aa4.93□□□□□ -1.62
PHGDH-233ENST00000642021 KRTAP4-7Q9BYR0 210 aa4.91□□□□□ -1.62
PHGDH-233ENST00000642021 SSPOA2VEC9 5147 aa4.81□□□□□ -1.64
PHGDH-233ENST00000642021 FSIP2Q5CZC0 6907 aa4.77□□□□□ -1.65
PHGDH-233ENST00000642021 MT1LQ93083 61 aa4.76□□□□□ -1.65
PHGDH-233ENST00000642021 MT1EP04732 61 aa4.76□□□□□ -1.65
PHGDH-233ENST00000642021 KRTAP2-3P0C7H8 128 aa4.75□□□□□ -1.65
PHGDH-233ENST00000642021 KRTAP2-4Q9BYR9 128 aa4.75□□□□□ -1.65
PHGDH-233ENST00000642021 KRTAP2-1Q9BYU5 128 aa4.75□□□□□ -1.65
PHGDH-233ENST00000642021 KRTAP19-4Q3LI73 84 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms